Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pteronotus_20parnellii_20[genbank_20GCA_5F000465405.1_202013-09-13] 177,401 sequences; 1,960,317,893 total letters Query= NC_001731.1 Length=190289 Score E Sequences producing significant alignments: (Bits) Value seq94176 288 1e-72 seq51264 102 1e-16 seq101242 82.4 9e-11 >seq94176 Length=1689 Score = 288 bits (318), Expect = 1e-72 Identities = 269/341 (79%), Gaps = 6/341 (2%) Strand=Plus/Plus Query 83057 AGCAGGGCCTCGATGTCGGGCTCCACGGCCAGGGTCTGGCAGCGGTGGCTGTACCTGCGC 83116 |||||||| |||||||||||||| | | | | |||| | ||||| |||||||||||||| Sbjct 1297 AGCAGGGCTTCGATGTCGGGCTCGATGTCAATGGTCGGAAAGCGGCGGCTGTACCTGCGC 1356 Query 83117 ACGGGCGTGCCGTCAGCACCCACCAAGAACTTCTCGAAGTTCCAGGCCACGTCGTTGCGG 83176 || ||| |||||| | ||||||| |||||||||||||||||||| || || |||||| Sbjct 1357 ACAGGCACGCCGTCCGGGCCCACCAGGAACTTCTCGAAGTTCCAGGAGACATCATTGCGG 1416 Query 83177 CACACTGGAGACCAGGCAATGAGCTGGGGGTCGCTCACGAGC---GTGCTCATGTCGTCG 83233 || || |||||||| | |||| || ||||||| ||| |||| |||| | |||||| Sbjct 1417 CAAACCGGAGACCACGTGATGAACTTGGGGTCGGTCATGAGCGCAGTGCCC---TCGTCG 1473 Query 83234 CTAGGCGCCGGCAGGGCCTCTCGTAGGAAGGCGAAGAGCGGATGTGCCCTTGCACCGTTG 83293 || || |||||||| |||| || |||||| |||||||||| |||||| || ||||| Sbjct 1474 CTGGGTGCCGGCAGAGCCTAACGCAGGAAGACGAAGAGCGGGTGTGCCTGCGCGCCGTTC 1533 Query 83294 ACCTCGCACTTCTCGAAGAGCATAAAGTTCGGCTCGAAGCCGTTCCCAGGACGGACGTGC 83353 ||||||||||||||||||| | | ||||| |||||||| ||| ||||| | |||| | Sbjct 1534 ACCTCGCACTTCTCGAAGATCGTGAAGTTGGGCTCGAACCCGCCACCAGGTCTAACGTAC 1593 Query 83354 TTCAGGGAAGGCAAGATCTCGGCATTCTGGGCGTTTTCCTG 83394 || ||| || || |||||| | |||| |||||| ||||| Sbjct 1594 TTGAGGCAATTCAGGATCTCTTCGTTCTTGGCGTTCTCCTG 1634 >seq51264 Length=1058 Score = 102 bits (112), Expect = 1e-16 Identities = 267/402 (66%), Gaps = 9/402 (2%) Strand=Plus/Plus Query 83143 GAACTTCTCGAAGTTCCAGGCCACGTCGTTGCGGCACACTGGAGACCAGGCAATGAGCTG 83202 ||||||||| |||||||||||||| ||| | ||| |||||| ||| ||| || Sbjct 5 GAACTTCTCAAAGTTCCAGGCCACATCGGAGTGGCGCACTGGGTTCCAAATGATGTACTT 64 Query 83203 GGGGTCGCTCACGAGCGTGCTCATGTCGTCGCTAGGCGCCGGCAG---GGCCTCTCGTAG 83259 |||||| ||| ||| | ||| | ||| || || | ||| || || Sbjct 65 GGGGTCAGTCATGAGAGAAAATGGGTCAGCATGAGGGAAGGGGAGTTTGTCCT-TC--AG 121 Query 83260 GAAGGCGAAGAGCGGATGTGCCCTTGCACCGTTGACCTCGCACTTCTCGAAGAGCATAAA 83319 | ||||||||| ||||| | | ||| || ||||| ||||| | || || |||| Sbjct 122 GTAGGCGAAGACAGGATGCTCGTTCTGACCATTCACCTCACACTTTTGGACAAGGGTAAA 181 Query 83320 GTTCGGCTCGAAGCCGTTCCCAGGACGGACGTGCTTCAGGGAAGGCAAGATCTCGGCATT 83379 | |||| ||| || |||||| ||||| | ||| || | | |||||| |||| Sbjct 182 GGGGGGCTGGAATCCACCCCCAGGGCGGACATACTTGAGACAGTTGAGGATCTCCTCATT 241 Query 83380 CTGGGCGTTTTCCTGGTGACCGAACTGGTTACACGGGAACCCAAGCACTACCAGCCCCCG 83439 ||| ||| ||| | || || | |||| || || || ||||| || ||||| | || Sbjct 242 CTGACAGTTCTCCCGATGTCCAGATCGGTTGCAAGGAAAGCCAAGAACCACCAGGCGCCT 301 Query 83440 AGCTCCTAGGCGCCGCTGCAGCTCGTTCATCTGAGTGTACTCCCGGACCGTGCTACCTCA 83499 | ||| || | |||||||||||| | ||| ||| | ||||| || | ||||| Sbjct 302 GGGA--TAG-CGGCACTGCAGCTCGTTGAGCTGGGTGAAGTCCCGAGTGGTTGTGCCTCA 358 Query 83500 GAGGGACGCTACGTTCTCGATGAGCAAGACCCGGCCCCGTAA 83541 ||| || ||||| ||||| || |||| ||| ||| || || Sbjct 359 GAGCGATGCTACATTCTCAATCAGCACTGCCCTGCCTCGGAA 400 >seq101242 Length=27414 Score = 82.4 bits (90), Expect = 9e-11 Identities = 195/286 (68%), Gaps = 13/286 (5%) Strand=Plus/Plus Query 50414 CTGCGCAAGATGTACG-GCGCAAGCAGGTCTATCTACAACTTCGCTGTGCGTATGCTCGT 50472 ||||||| || || | | ||| || ||| ||| |||||| || ||| |||| || Sbjct 2459 CTGCGCAGCATCTATGAGAGCA-GCCTGTCCATCGGCAACTTTGCATCGCGCCTGCTGGT 2517 Query 50473 GTACATGTTTCCAGAGCTCTTTACTGCGGAGAACCTGCACACGCACTTCAACTGCTACGG 50532 | || | || || || ||||| || |||||||||| || || | ||||||| || Sbjct 2518 GCACCTCTTCCCCGAACTCTTCACGCATGAGAACCTGCGCAAACAGTACAACTGCAGTGG 2577 Query 50533 CTCCATGGGCAAGC-GCAGGCTCGACCCGCTACGCCTGCGCTTGCTC---CGGCACTATG 50588 ||| ||||||| |||| || |||||| || | | |||| || || |||| Sbjct 2578 CTCTCTGGGCAAAAAGCAG-CTGGACCCGTCCCGTAT---CAAGCTCATTCGCCATTATG 2633 Query 50589 TGCAGTTGCTGCACCCGGCGGCGCGCAACGAGCGCGTGTGGATCACAAAGTTCCTGGCGT 50648 ||||| |||| |||| ||| ||||| ||||| |||| |||| ||| Sbjct 2634 TGCAGCTGCTCTACCCCCGGGCCAAAAACGACCGCGTCTGGACGCTGGAGTTTGTGGGCA 2693 Query 50649 GCCTGGACGAGCGCTGCCGGCGCCGCTGCGCACGGA-CACAGGCGC 50693 ||||||||||||||||||||||| | |||||| || |||||| Sbjct 2694 AACTGGACGAGCGCTGCCGGCGCCG--GGACACGGAGCAGAGGCGC 2737 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 607446785486040