Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pteronotus_20parnellii_20[genbank_20GCA_5F000465405.1_202013-09-13]
177,401 sequences; 1,960,317,893 total letters
Query= NC_001731.1
Length=190289
Score E
Sequences producing significant alignments: (Bits) Value
seq94176 288 1e-72
seq51264 102 1e-16
seq101242 82.4 9e-11
>seq94176
Length=1689
Score = 288 bits (318), Expect = 1e-72
Identities = 269/341 (79%), Gaps = 6/341 (2%)
Strand=Plus/Plus
Query 83057 AGCAGGGCCTCGATGTCGGGCTCCACGGCCAGGGTCTGGCAGCGGTGGCTGTACCTGCGC 83116
|||||||| |||||||||||||| | | | | |||| | ||||| ||||||||||||||
Sbjct 1297 AGCAGGGCTTCGATGTCGGGCTCGATGTCAATGGTCGGAAAGCGGCGGCTGTACCTGCGC 1356
Query 83117 ACGGGCGTGCCGTCAGCACCCACCAAGAACTTCTCGAAGTTCCAGGCCACGTCGTTGCGG 83176
|| ||| |||||| | ||||||| |||||||||||||||||||| || || ||||||
Sbjct 1357 ACAGGCACGCCGTCCGGGCCCACCAGGAACTTCTCGAAGTTCCAGGAGACATCATTGCGG 1416
Query 83177 CACACTGGAGACCAGGCAATGAGCTGGGGGTCGCTCACGAGC---GTGCTCATGTCGTCG 83233
|| || |||||||| | |||| || ||||||| ||| |||| |||| | ||||||
Sbjct 1417 CAAACCGGAGACCACGTGATGAACTTGGGGTCGGTCATGAGCGCAGTGCCC---TCGTCG 1473
Query 83234 CTAGGCGCCGGCAGGGCCTCTCGTAGGAAGGCGAAGAGCGGATGTGCCCTTGCACCGTTG 83293
|| || |||||||| |||| || |||||| |||||||||| |||||| || |||||
Sbjct 1474 CTGGGTGCCGGCAGAGCCTAACGCAGGAAGACGAAGAGCGGGTGTGCCTGCGCGCCGTTC 1533
Query 83294 ACCTCGCACTTCTCGAAGAGCATAAAGTTCGGCTCGAAGCCGTTCCCAGGACGGACGTGC 83353
||||||||||||||||||| | | ||||| |||||||| ||| ||||| | |||| |
Sbjct 1534 ACCTCGCACTTCTCGAAGATCGTGAAGTTGGGCTCGAACCCGCCACCAGGTCTAACGTAC 1593
Query 83354 TTCAGGGAAGGCAAGATCTCGGCATTCTGGGCGTTTTCCTG 83394
|| ||| || || |||||| | |||| |||||| |||||
Sbjct 1594 TTGAGGCAATTCAGGATCTCTTCGTTCTTGGCGTTCTCCTG 1634
>seq51264
Length=1058
Score = 102 bits (112), Expect = 1e-16
Identities = 267/402 (66%), Gaps = 9/402 (2%)
Strand=Plus/Plus
Query 83143 GAACTTCTCGAAGTTCCAGGCCACGTCGTTGCGGCACACTGGAGACCAGGCAATGAGCTG 83202
||||||||| |||||||||||||| ||| | ||| |||||| ||| ||| ||
Sbjct 5 GAACTTCTCAAAGTTCCAGGCCACATCGGAGTGGCGCACTGGGTTCCAAATGATGTACTT 64
Query 83203 GGGGTCGCTCACGAGCGTGCTCATGTCGTCGCTAGGCGCCGGCAG---GGCCTCTCGTAG 83259
|||||| ||| ||| | ||| | ||| || || | ||| || ||
Sbjct 65 GGGGTCAGTCATGAGAGAAAATGGGTCAGCATGAGGGAAGGGGAGTTTGTCCT-TC--AG 121
Query 83260 GAAGGCGAAGAGCGGATGTGCCCTTGCACCGTTGACCTCGCACTTCTCGAAGAGCATAAA 83319
| ||||||||| ||||| | | ||| || ||||| ||||| | || || ||||
Sbjct 122 GTAGGCGAAGACAGGATGCTCGTTCTGACCATTCACCTCACACTTTTGGACAAGGGTAAA 181
Query 83320 GTTCGGCTCGAAGCCGTTCCCAGGACGGACGTGCTTCAGGGAAGGCAAGATCTCGGCATT 83379
| |||| ||| || |||||| ||||| | ||| || | | |||||| ||||
Sbjct 182 GGGGGGCTGGAATCCACCCCCAGGGCGGACATACTTGAGACAGTTGAGGATCTCCTCATT 241
Query 83380 CTGGGCGTTTTCCTGGTGACCGAACTGGTTACACGGGAACCCAAGCACTACCAGCCCCCG 83439
||| ||| ||| | || || | |||| || || || ||||| || ||||| | ||
Sbjct 242 CTGACAGTTCTCCCGATGTCCAGATCGGTTGCAAGGAAAGCCAAGAACCACCAGGCGCCT 301
Query 83440 AGCTCCTAGGCGCCGCTGCAGCTCGTTCATCTGAGTGTACTCCCGGACCGTGCTACCTCA 83499
| ||| || | |||||||||||| | ||| ||| | ||||| || | |||||
Sbjct 302 GGGA--TAG-CGGCACTGCAGCTCGTTGAGCTGGGTGAAGTCCCGAGTGGTTGTGCCTCA 358
Query 83500 GAGGGACGCTACGTTCTCGATGAGCAAGACCCGGCCCCGTAA 83541
||| || ||||| ||||| || |||| ||| ||| || ||
Sbjct 359 GAGCGATGCTACATTCTCAATCAGCACTGCCCTGCCTCGGAA 400
>seq101242
Length=27414
Score = 82.4 bits (90), Expect = 9e-11
Identities = 195/286 (68%), Gaps = 13/286 (5%)
Strand=Plus/Plus
Query 50414 CTGCGCAAGATGTACG-GCGCAAGCAGGTCTATCTACAACTTCGCTGTGCGTATGCTCGT 50472
||||||| || || | | ||| || ||| ||| |||||| || ||| |||| ||
Sbjct 2459 CTGCGCAGCATCTATGAGAGCA-GCCTGTCCATCGGCAACTTTGCATCGCGCCTGCTGGT 2517
Query 50473 GTACATGTTTCCAGAGCTCTTTACTGCGGAGAACCTGCACACGCACTTCAACTGCTACGG 50532
| || | || || || ||||| || |||||||||| || || | ||||||| ||
Sbjct 2518 GCACCTCTTCCCCGAACTCTTCACGCATGAGAACCTGCGCAAACAGTACAACTGCAGTGG 2577
Query 50533 CTCCATGGGCAAGC-GCAGGCTCGACCCGCTACGCCTGCGCTTGCTC---CGGCACTATG 50588
||| ||||||| |||| || |||||| || | | |||| || || ||||
Sbjct 2578 CTCTCTGGGCAAAAAGCAG-CTGGACCCGTCCCGTAT---CAAGCTCATTCGCCATTATG 2633
Query 50589 TGCAGTTGCTGCACCCGGCGGCGCGCAACGAGCGCGTGTGGATCACAAAGTTCCTGGCGT 50648
||||| |||| |||| ||| ||||| ||||| |||| |||| |||
Sbjct 2634 TGCAGCTGCTCTACCCCCGGGCCAAAAACGACCGCGTCTGGACGCTGGAGTTTGTGGGCA 2693
Query 50649 GCCTGGACGAGCGCTGCCGGCGCCGCTGCGCACGGA-CACAGGCGC 50693
||||||||||||||||||||||| | |||||| || ||||||
Sbjct 2694 AACTGGACGAGCGCTGCCGGCGCCG--GGACACGGAGCAGAGGCGC 2737
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 607446785486040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |