Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pteronotus_20parnellii_20[genbank_20GCA_5F000465405.1_202013-09-13] 177,401 sequences; 1,960,317,893 total letters Query= NC_001962.1 Length=128413 Score E Sequences producing significant alignments: (Bits) Value seq104553 84.2 2e-11 seq174782 82.4 6e-11 seq161317 82.4 6e-11 >seq104553 Length=43841 Score = 84.2 bits (92), Expect = 2e-11 Identities = 90/119 (76%), Gaps = 0/119 (0%) Strand=Plus/Minus Query 25128 GATAAAGAAGGTGTGCCCGTAGATCAACAAAGACTTATCTTTGCGGGCAAACAATTGGAA 25187 ||||| ||||| | || ||||| |||| ||| |||||||| ||||| ||| ||||| Sbjct 35600 GATAAGGAAGGAATTCCTCCTGATCAGCAAAAACTGATCTTTGCTGGCAAGCAACTGGAA 35541 Query 25188 GATTCCAAAACTATGGCCGATTACAATATTCAAAAGGAATCTACTCTTCACATGGTGTT 25246 ||| ||| || | || ||||| ||||||||||| ||||||||||| | ||||| Sbjct 35540 GATGGGCGTACTTTGTCTGACTACAACATTCAAAAGGAGTCTACTCTTCATCTTGTGTT 35482 >seq174782 Length=7384 Score = 82.4 bits (90), Expect = 6e-11 Identities = 84/110 (76%), Gaps = 0/110 (0%) Strand=Plus/Minus Query 25128 GATAAAGAAGGTGTGCCCGTAGATCAACAAAGACTTATCTTTGCGGGCAAACAATTGGAA 25187 ||||| ||||| | || ||||| |||||||| |||||||| || || ||| ||||| Sbjct 246 GATAAGGAAGGAATTCCTCCTGATCAGCAAAGACTGATCTTTGCTGGAAAGCAACTGGAA 187 Query 25188 GATTCCAAAACTATGGCCGATTACAATATTCAAAAGGAATCTACTCTTCA 25237 ||| ||| || | || ||||| ||||||||||| ||||||||||| Sbjct 186 GATGGACGTACTTTGTCTGACTACAACATTCAAAAGGAGTCTACTCTTCA 137 >seq161317 Length=2104 Score = 82.4 bits (90), Expect = 6e-11 Identities = 75/95 (79%), Gaps = 0/95 (0%) Strand=Plus/Minus Query 25149 GATCAACAAAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCCAAAACTATGGCCGAT 25208 |||||||| |||| ||||| || ||||| ||| | |||||| | |||| | |||| Sbjct 1418 GATCAACAGCGACTCATCTTCGCTGGCAAGCAACTTGAAGATGGCCGAACTCTTTCCGAC 1359 Query 25209 TACAATATTCAAAAGGAATCTACTCTTCACATGGT 25243 ||||| ||||| |||||||||||||| ||| |||| Sbjct 1358 TACAACATTCAGAAGGAATCTACTCTCCACTTGGT 1324 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 409908626637014