Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pteronotus_20parnellii_20[genbank_20GCA_5F000465405.1_202013-09-13]
177,401 sequences; 1,960,317,893 total letters
Query= NC_001987.1
Length=108409
Score E
Sequences producing significant alignments: (Bits) Value
seq18562 168 5e-37
>seq18562
Length=18598
Score = 168 bits (186), Expect = 5e-37
Identities = 432/656 (66%), Gaps = 9/656 (1%)
Strand=Plus/Minus
Query 97010 GGAAAGGCCTGGGAGTTCGCGTAAGCTGCTCTGTGAGAGCATCAATGTGATTCACATAAA 97069
||||||| || || || | ||||||| | | || | ||| | ||||||| ||||
Sbjct 12877 GGAAAGGTCTTGGTTCTCACTGAAGCTGCAGTTTCAGCGGCTCAGTATGATTCAGGTAAA 12818
Query 97070 TGTGAGCATCTCCTAAAGTGTGAATAAATTCTCCAGGAACTAAATCAGTGACATGGGCGA 97129
||| |||||||| |||||||| | ||| || || || || | ||| || ||||
Sbjct 12817 CGTGTGCATCTCCCAAAGTGTGTACAAAGTCACCTGGCTTTAGGCCCATGATGTGTGCGA 12758
Query 97130 TCATACAAGTTAATAGAGAATAGCTAGCAATGTTAAAAGGCACCCCTAGTCCCATATCAG 97189
|||| || | || || ||||| | ||||| || || | || || ||||| || |
Sbjct 12757 TCATGTGGGTGAGCAGGGAGTAGCTGGAGATGTTGAAGGGTGCGCCCAGGCCCATGTCTG 12698
Query 97190 CTGATCTTTGATATAACTGACAGGAAAGCTTTCCAT----CAC----ACACATAAAACTG 97241
|||| || || |||| ||| ||||| |||| |||| ||| |||| || |||||
Sbjct 12697 CTGACCTCTGGTATAGCTGGCAGGACAGCTCCCCATTCATCACGTAGACACGTAGAACTG 12638
Query 97242 ACTCAATACATGACAGGGGGGCAACGCCATTTTTGGAACATCTAAGACATTCCAAGCACA 97301
| | |||| || || || | ||||| |||| |||| ||||||||||||
Sbjct 12637 GCAAAGGGCATGGCATGGAGGTAGGGCCATGAAAGGAAGATCTTTTGGATTCCAAGCACA 12578
Query 97302 CATCAACATTCTTCTATCGGTTGGGTTTGTGTGTATGGTATTAATTATCTGCTTTAATTG 97361
|| | |||||||| || || || || || | || | | ||| | || | | |||
Sbjct 12577 CAGAATGATTCTTCTGTCAGTAGGTTTGGTTTTGATCATGTCAATCACCTTTTGCAGTTG 12518
Query 97362 ATCAACGCCTTCTCCACCATAATTGTGCTTAAGACCTTGATATTCTGCTCCAAAATGCCT 97421
| || |||| || ||||| | | | || |||||||| |||||||||||
Sbjct 12517 GCCCACTCCTTGACCTGAATAATCTGAATCCATATTTTTGTATTCTGCCCCAAAATGCCT 12458
Query 97422 CCATTGGAATCCATAAACAGGTCCAAGGTCTCCTTCTTCTCTATCACAGAAACCAAGCTT 97481
||| || || || ||||| || || | || || |||| ||| | |||| |||||
Sbjct 12457 CCACTGAAAGCC-TAAACTGGGCCTAAATCCCCCTCTTTTCTGCTAGAGAATCCAAGGCC 12399
Query 97482 ATCTAAATAGGACCTAGATCCATTTGCATCCCAAATGTGCACACCAGATGCTGCAAGCTC 97541
||| | || | ||| ||||| |||||||| || | ||| || | || || ||
Sbjct 12398 ATCCAGGAAGTCACGAGACCCATTGGCATCCCAGATTTTCACTCCCCTGGTTGACAGTTC 12339
Query 97542 TTTGCTGTCAGTAGATCCTCTGATAAACCACAACAATTCTTCCACAACACCTCTCCAAAA 97601
||| | || ||||| |||||||||||| || || |||| || || |||| ||
Sbjct 12338 TTTAGCATTTGTGGATCCGTTGATAAACCACAGCAGCTCCTCCAAAATCCCCTTCCAGAA 12279
Query 97602 TACTCTCTTAGTTGTTAAGAGAGGAAAATCCTTTTCTAAGCTGTATCTAGACTGCA 97657
|| | || ||||| | |||||||| || | | | |||||| || | | |||
Sbjct 12278 CACACATTTGGTTGTCAGCAGAGGAAATTCATCTCTCAGGCTGTAGCTCGCCCGCA 12223
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 346034227091570
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |