Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pteronotus_20parnellii_20[genbank_20GCA_5F000465405.1_202013-09-13] 177,401 sequences; 1,960,317,893 total letters Query= NC_001987.1 Length=108409 Score E Sequences producing significant alignments: (Bits) Value seq18562 168 5e-37 >seq18562 Length=18598 Score = 168 bits (186), Expect = 5e-37 Identities = 432/656 (66%), Gaps = 9/656 (1%) Strand=Plus/Minus Query 97010 GGAAAGGCCTGGGAGTTCGCGTAAGCTGCTCTGTGAGAGCATCAATGTGATTCACATAAA 97069 ||||||| || || || | ||||||| | | || | ||| | ||||||| |||| Sbjct 12877 GGAAAGGTCTTGGTTCTCACTGAAGCTGCAGTTTCAGCGGCTCAGTATGATTCAGGTAAA 12818 Query 97070 TGTGAGCATCTCCTAAAGTGTGAATAAATTCTCCAGGAACTAAATCAGTGACATGGGCGA 97129 ||| |||||||| |||||||| | ||| || || || || | ||| || |||| Sbjct 12817 CGTGTGCATCTCCCAAAGTGTGTACAAAGTCACCTGGCTTTAGGCCCATGATGTGTGCGA 12758 Query 97130 TCATACAAGTTAATAGAGAATAGCTAGCAATGTTAAAAGGCACCCCTAGTCCCATATCAG 97189 |||| || | || || ||||| | ||||| || || | || || ||||| || | Sbjct 12757 TCATGTGGGTGAGCAGGGAGTAGCTGGAGATGTTGAAGGGTGCGCCCAGGCCCATGTCTG 12698 Query 97190 CTGATCTTTGATATAACTGACAGGAAAGCTTTCCAT----CAC----ACACATAAAACTG 97241 |||| || || |||| ||| ||||| |||| |||| ||| |||| || ||||| Sbjct 12697 CTGACCTCTGGTATAGCTGGCAGGACAGCTCCCCATTCATCACGTAGACACGTAGAACTG 12638 Query 97242 ACTCAATACATGACAGGGGGGCAACGCCATTTTTGGAACATCTAAGACATTCCAAGCACA 97301 | | |||| || || || | ||||| |||| |||| |||||||||||| Sbjct 12637 GCAAAGGGCATGGCATGGAGGTAGGGCCATGAAAGGAAGATCTTTTGGATTCCAAGCACA 12578 Query 97302 CATCAACATTCTTCTATCGGTTGGGTTTGTGTGTATGGTATTAATTATCTGCTTTAATTG 97361 || | |||||||| || || || || || | || | | ||| | || | | ||| Sbjct 12577 CAGAATGATTCTTCTGTCAGTAGGTTTGGTTTTGATCATGTCAATCACCTTTTGCAGTTG 12518 Query 97362 ATCAACGCCTTCTCCACCATAATTGTGCTTAAGACCTTGATATTCTGCTCCAAAATGCCT 97421 | || |||| || ||||| | | | || |||||||| ||||||||||| Sbjct 12517 GCCCACTCCTTGACCTGAATAATCTGAATCCATATTTTTGTATTCTGCCCCAAAATGCCT 12458 Query 97422 CCATTGGAATCCATAAACAGGTCCAAGGTCTCCTTCTTCTCTATCACAGAAACCAAGCTT 97481 ||| || || || ||||| || || | || || |||| ||| | |||| ||||| Sbjct 12457 CCACTGAAAGCC-TAAACTGGGCCTAAATCCCCCTCTTTTCTGCTAGAGAATCCAAGGCC 12399 Query 97482 ATCTAAATAGGACCTAGATCCATTTGCATCCCAAATGTGCACACCAGATGCTGCAAGCTC 97541 ||| | || | ||| ||||| |||||||| || | ||| || | || || || Sbjct 12398 ATCCAGGAAGTCACGAGACCCATTGGCATCCCAGATTTTCACTCCCCTGGTTGACAGTTC 12339 Query 97542 TTTGCTGTCAGTAGATCCTCTGATAAACCACAACAATTCTTCCACAACACCTCTCCAAAA 97601 ||| | || ||||| |||||||||||| || || |||| || || |||| || Sbjct 12338 TTTAGCATTTGTGGATCCGTTGATAAACCACAGCAGCTCCTCCAAAATCCCCTTCCAGAA 12279 Query 97602 TACTCTCTTAGTTGTTAAGAGAGGAAAATCCTTTTCTAAGCTGTATCTAGACTGCA 97657 || | || ||||| | |||||||| || | | | |||||| || | | ||| Sbjct 12278 CACACATTTGGTTGTCAGCAGAGGAAATTCATCTCTCAGGCTGTAGCTCGCCCGCA 12223 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 346034227091570