Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pteronotus_20parnellii_20[genbank_20GCA_5F000465405.1_202013-09-13] 177,401 sequences; 1,960,317,893 total letters Query= NC_002188.1 Length=288539 Score E Sequences producing significant alignments: (Bits) Value seq144260 107 4e-18 >seq144260 Length=9703 Score = 107 bits (118), Expect = 4e-18 Identities = 194/280 (69%), Gaps = 4/280 (1%) Strand=Plus/Minus Query 52051 GGTCAGGCATTTTTTGGAGCTCAGCTAAATTCTTTTATCCATGTTATTATGTACACTTAT 52110 || || |||||||||||||| || || |||||||| |||||||| |||| |||| | || Sbjct 7394 GGACAAGCATTTTTTGGAGCCCACCTGAATTCTTTCATCCATGTGATTAGGTACTCATAC 7335 Query 52111 TATGGTATGGCCGCTTGTGGTCCTATG--TTCAGAAAGTATCTATGGTGGAAACGTTATC 52168 || | | | || | ||| || ||| ||||| || | ||| || |||||| || | Sbjct 7334 TACAGGTTAACTGCATTTGG-CCCATGGATTCAG-AATTGTCTTTGATGGAAATAATACC 7277 Query 52169 TTACTATAATGCAGTTGGTACAGTTCCATATAGCTATAGGACATACTGCTATGTCCATTT 52228 | | ||| ||||| |||| | |||| || | || | ||||| || || | ||| Sbjct 7276 TGAGCATATTGCAGCTGGTTCGGTTCTTCATGACCATTAGGCATACGGCACTGCCTCTTT 7217 Query 52229 ACATAGATTGCCCGTTTCCAAAATGGATACAGTGGTCAGTTATTATCTATTCTATTAGTT 52288 ||| ||||| | || ||||||||| || ||| | | ||| ||| | || || | Sbjct 7216 ACACTGATTGTCTCTTCTAAAAATGGATGCACTGGGCTCTAATTGCCTACACAATCAGCT 7157 Query 52289 TCATATTACTGTTTGGTAACTTCTATTTTAGAACATACAA 52328 ||||||| || ||| |||||||| || |||||||| Sbjct 7156 TCATATTTCTCTTTCTCAACTTCTACATTCAGACATACAA 7117 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 921149599556040