Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pteronotus_20parnellii_20[genbank_20GCA_5F000465405.1_202013-09-13]
177,401 sequences; 1,960,317,893 total letters
Query= NC_002520.1
Length=232392
Score E
Sequences producing significant alignments: (Bits) Value
seq174782 107 3e-18
seq104553 93.3 6e-14
seq122414 84.2 3e-11
seq21029 84.2 3e-11
>seq174782
Length=7384
Score = 107 bits (118), Expect = 3e-18
Identities = 108/138 (78%), Gaps = 2/138 (1%)
Strand=Plus/Plus
Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTC-TTTAGATATATTATAATCTGA 146109
||||| | |||||| ||||| | ||| | |||||| || ||| || || || || || ||
Sbjct 113 CCACCACAAAGTCTCAATACAAGATGAAGAGTAGACTCCTTTTGA-ATGTTGTAGTCAGA 171
Query 146110 AAGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGG 146169
| ||| | | ||| || | ||| ||||||||||| |||| |||||||||||| |||||
Sbjct 172 CAAAGTACGTCCATCTTCCAGTTGCTTTCCAGCAAAGATCAGTCTTTGCTGATCAGGAGG 231
Query 146170 AATTCCTTCTTTATCTTG 146187
||||||||| ||||| ||
Sbjct 232 AATTCCTTCCTTATCCTG 249
>seq104553
Length=43841
Score = 93.3 bits (102), Expect = 6e-14
Identities = 105/138 (76%), Gaps = 2/138 (1%)
Strand=Plus/Plus
Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTC-TTTAGATATATTATAATCTGA 146109
||||| | |||||| || || | ||| | |||||| || ||| || || || || || ||
Sbjct 35467 CCACCACGAAGTCTCAACACAAGATGAAGAGTAGACTCCTTTTGA-ATGTTGTAGTCAGA 35525
Query 146110 AAGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGG 146169
| ||| | | ||| || | ||| || |||||||| |||| | |||||||||| |||||
Sbjct 35526 CAAAGTACGCCCATCTTCCAGTTGCTTGCCAGCAAAGATCAGTTTTTGCTGATCAGGAGG 35585
Query 146170 AATTCCTTCTTTATCTTG 146187
||||||||| ||||| ||
Sbjct 35586 AATTCCTTCCTTATCCTG 35603
>seq122414
Length=20378
Score = 84.2 bits (92), Expect = 3e-11
Identities = 100/133 (75%), Gaps = 2/133 (2%)
Strand=Plus/Minus
Query 146052 CACCTCTAAGTCTTAATACCAAATGTAAAGTAGAT-TCTTTAGATATATTATAATCTGAA 146110
|||| | |||||| || || | ||| | || ||| ||||| || || || || || ||
Sbjct 19043 CACCACGAAGTCTCAACACAAGATGAAGAGCAGACATCTTTTGA-ATGTTGTAGTCAGAC 18985
Query 146111 AGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGA 146170
| | | | | ||| || | ||| || |||||||| ||||||||||||||||| ||||||
Sbjct 18984 AAATTACACCCATCTTCCAGTTGCTTGCCAGCAAAGATCAATCTTTGCTGATCAGGAGGA 18925
Query 146171 ATTCCTTCTTTAT 146183
|||| ||| ||||
Sbjct 18924 ATTCTTTCCTTAT 18912
>seq21029
Length=19983
Score = 84.2 bits (92), Expect = 3e-11
Identities = 98/130 (75%), Gaps = 2/130 (2%)
Strand=Plus/Minus
Query 146059 AAGTCTTAATACCAAATGTAAAGTAGATTC-TTTAGATATATTATAATCTGAAAGAGTTC 146117
|| ||| || || | ||| | ||| | || ||| || || || || || || | ||| |
Sbjct 18007 AATTCTCAACACGAGATGGAGAGTGGGCTCCTTTTGA-ATGTTGTAGTCAGACAAAGTGC 17949
Query 146118 TGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGAATTCCTT 146177
| ||| |||| |||||| |||||||| || |||||||||||||| ||||||||| |||
Sbjct 17948 ATCCATCTTCTACTTGTTTGCCAGCAAAGATTAATCTTTGCTGATCAGGAGGAATTTCTT 17889
Query 146178 CTTTATCTTG 146187
| ||||| ||
Sbjct 17888 CCTTATCCTG 17879
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 741877620913920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |