Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pteronotus_20parnellii_20[genbank_20GCA_5F000465405.1_202013-09-13] 177,401 sequences; 1,960,317,893 total letters Query= NC_002520.1 Length=232392 Score E Sequences producing significant alignments: (Bits) Value seq174782 107 3e-18 seq104553 93.3 6e-14 seq122414 84.2 3e-11 seq21029 84.2 3e-11 >seq174782 Length=7384 Score = 107 bits (118), Expect = 3e-18 Identities = 108/138 (78%), Gaps = 2/138 (1%) Strand=Plus/Plus Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTC-TTTAGATATATTATAATCTGA 146109 ||||| | |||||| ||||| | ||| | |||||| || ||| || || || || || || Sbjct 113 CCACCACAAAGTCTCAATACAAGATGAAGAGTAGACTCCTTTTGA-ATGTTGTAGTCAGA 171 Query 146110 AAGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGG 146169 | ||| | | ||| || | ||| ||||||||||| |||| |||||||||||| ||||| Sbjct 172 CAAAGTACGTCCATCTTCCAGTTGCTTTCCAGCAAAGATCAGTCTTTGCTGATCAGGAGG 231 Query 146170 AATTCCTTCTTTATCTTG 146187 ||||||||| ||||| || Sbjct 232 AATTCCTTCCTTATCCTG 249 >seq104553 Length=43841 Score = 93.3 bits (102), Expect = 6e-14 Identities = 105/138 (76%), Gaps = 2/138 (1%) Strand=Plus/Plus Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTC-TTTAGATATATTATAATCTGA 146109 ||||| | |||||| || || | ||| | |||||| || ||| || || || || || || Sbjct 35467 CCACCACGAAGTCTCAACACAAGATGAAGAGTAGACTCCTTTTGA-ATGTTGTAGTCAGA 35525 Query 146110 AAGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGG 146169 | ||| | | ||| || | ||| || |||||||| |||| | |||||||||| ||||| Sbjct 35526 CAAAGTACGCCCATCTTCCAGTTGCTTGCCAGCAAAGATCAGTTTTTGCTGATCAGGAGG 35585 Query 146170 AATTCCTTCTTTATCTTG 146187 ||||||||| ||||| || Sbjct 35586 AATTCCTTCCTTATCCTG 35603 >seq122414 Length=20378 Score = 84.2 bits (92), Expect = 3e-11 Identities = 100/133 (75%), Gaps = 2/133 (2%) Strand=Plus/Minus Query 146052 CACCTCTAAGTCTTAATACCAAATGTAAAGTAGAT-TCTTTAGATATATTATAATCTGAA 146110 |||| | |||||| || || | ||| | || ||| ||||| || || || || || || Sbjct 19043 CACCACGAAGTCTCAACACAAGATGAAGAGCAGACATCTTTTGA-ATGTTGTAGTCAGAC 18985 Query 146111 AGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGA 146170 | | | | | ||| || | ||| || |||||||| ||||||||||||||||| |||||| Sbjct 18984 AAATTACACCCATCTTCCAGTTGCTTGCCAGCAAAGATCAATCTTTGCTGATCAGGAGGA 18925 Query 146171 ATTCCTTCTTTAT 146183 |||| ||| |||| Sbjct 18924 ATTCTTTCCTTAT 18912 >seq21029 Length=19983 Score = 84.2 bits (92), Expect = 3e-11 Identities = 98/130 (75%), Gaps = 2/130 (2%) Strand=Plus/Minus Query 146059 AAGTCTTAATACCAAATGTAAAGTAGATTC-TTTAGATATATTATAATCTGAAAGAGTTC 146117 || ||| || || | ||| | ||| | || ||| || || || || || || | ||| | Sbjct 18007 AATTCTCAACACGAGATGGAGAGTGGGCTCCTTTTGA-ATGTTGTAGTCAGACAAAGTGC 17949 Query 146118 TGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGAATTCCTT 146177 | ||| |||| |||||| |||||||| || |||||||||||||| ||||||||| ||| Sbjct 17948 ATCCATCTTCTACTTGTTTGCCAGCAAAGATTAATCTTTGCTGATCAGGAGGAATTTCTT 17889 Query 146178 CTTTATCTTG 146187 | ||||| || Sbjct 17888 CCTTATCCTG 17879 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 741877620913920