Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pteronotus_20parnellii_20[genbank_20GCA_5F000465405.1_202013-09-13]
177,401 sequences; 1,960,317,893 total letters
Query= NC_002642.1
Length=144575
Score E
Sequences producing significant alignments: (Bits) Value
seq41434 152 5e-32
seq39192 143 2e-29
seq32390 98.7 9e-16
>seq41434
Length=11022
Score = 152 bits (168), Expect = 5e-32
Identities = 482/740 (65%), Gaps = 18/740 (2%)
Strand=Plus/Minus
Query 15929 GACATAACTGACATTTTTTGATATTCACTAACTCTCTTTTCAAAGAAATTTGTTTTTCCT 15988
||||| | | ||| | |||||||| | | || || |||||||| || || || ||
Sbjct 7898 GACATCATTCCCATCCTCTGATATTCGCCTTCGCTTTTCTCAAAGAAGTTGGTCTTCCCC 7839
Query 15989 TCTAATGAAATATTTTCCATAAAATCAAAAGGATTTTTTGAACAATAGTATTTATCGC-- 16046
|| | ||||||||| ||||| || ||||| | |||| ||| | | | | ||
Sbjct 7838 TCCAGTGAAATATTCTCCATGAAGTCAAACCGGTTTTC--AACT-TGGAAAGCCTTGCTA 7782
Query 16047 -ATCCCAATTCCAACAATAATCTATCCGCCACAAATTCTATATACTGTTTCATTAAATCA 16105
| ||||| |||| || | || || |||| |||| || ||||| ||||| |||
Sbjct 7781 AAACCCAACTCCAGCAGGAGCCTGTCAGCCATGAATTGAATGTACTGCTTCATCAAAGTG 7722
Query 16106 CAGTTCATTCCTATTAATTTAACAGGGATTGCTTCTGTTAAAAAAtttttttCTATATTA 16165
|| ||||| || || | || || || | || || || | || | | |||||| ||
Sbjct 7721 CAATTCATGCCAATGAGCTTCACTGGCAAGGCCTCGGTGAGGAACTCCTCTTCTATCCTA 7662
Query 16166 ACCGCTTCAATGATTATATCTCTTACTACACTATTTAACGGAGGGTTT----AATAAGTG 16221
||||| | ||| ||||| || ||||| | || | | || ||||| || | |||
Sbjct 7661 ACCGCATTAATAATTATTTCATTTACT-CTCTGCT---CTGAAGGTTTGTACAACAGGTG 7606
Query 16222 TTTAAACATTATACAAGCAAAATCACAATGCAATCCTTCGTCCCTACTTATTAACTCGTT 16281
||| ||||| | || ||||| || || || | || || || || || || | |||| |
Sbjct 7605 TTTGAACATCAGGCAGGCAAAGTCCCAGTGATAGCCCTCATCTCTGCTAATAAGCTCGCT 7546
Query 16282 TGAAAATGTAAGACCTGGCATTAGTCCTCGTTTTTTAATCCAAAATATAGCGGCAAATGA 16341
|| ||||| ||||| ||||| || ||||| || | | ||| ||||| | | || ||
Sbjct 7545 GGAGAATGTGAGACCAGGCATCAGCCCTCGCTTCCTGAGCCAGAATATTGATGTGAAAGA 7486
Query 16342 ACCAGAAAAGAATATACCTTCAACTGCGGCAAATGCAACCAATCGCTCACCGTACGT--T 16399
||||||||||| | |||| || | ||||| || |||| |||| || | || |
Sbjct 7485 CCCAGAAAAGAAGGTTCCTTGCACCTCAGCAAAGGCCACCACATGCTCTCCACAGGTGGT 7426
Query 16400 CTAtttttactttctatccattttttagcccaatttgctttttgtttAACACAGTTCATG 16459
|| ||| | | | ||||| ||||| | | | || | || ||||| |||
Sbjct 7425 CTCTTTGTCC--CCGATCCAGCGCAAGGCCCAGTATACCTTCTTCTTGACACAAGGCATC 7368
Query 16460 TTCTCTATTGCATTAAATAAATAAtttttttCTTTGCTATCTAAAATATAAGTATCTATT 16519
| | ||||| || | | | |||| ||| |||| |||||||| | |
Sbjct 7367 AGTTTGAAGGCATTGAAGAGGAACTCCCTTTCCTTGTGATCTTTGATATAAGTGTTGAGG 7308
Query 16520 AGTAAACTATACATTTCTGAATGAATATTCTCCATTGCTATCTGAAAACCATAAAAGCAT 16579
|| | || ||||| || ||||| ||||| ||||| || ||||| || || || |||||
Sbjct 7307 AGGAGGCTGTACATCTCAGAATGTATATTTTCCATGGCAATCTGGAAGCCGTAGAAGCAG 7248
Query 16580 CTAGCTTCGGATATTTGTACTTCAGAGTAAAACCTTTCTGCTAAGTTTTCGTTAACTATT 16639
| ||||| | || || |||| | | || || | |||||||| || || ||
Sbjct 7247 CAGGCTTCTGTGATCTGAACTTGCTGGCTATACTGCTCCACCAAGTTTTCATTCACAATG 7188
Query 16640 CCATCGCTAGCTGCAAAAAA 16659
|||| || ||| |||| ||
Sbjct 7187 CCATTACTTGCTACAAAGAA 7168
>seq39192
Length=20454
Score = 143 bits (158), Expect = 2e-29
Identities = 496/760 (65%), Gaps = 29/760 (4%)
Strand=Plus/Minus
Query 15929 GACATAACTGACATTTTTTGATATTCACTAACTCT-CT-TTTCAAAGAAA------TTTG 15980
||||| ||| ||| | ||||| |||| ||||| || ||||||| ||| ||||
Sbjct 14610 GACATCACTCCCATCCTCTGATACTCACCTACTCTTCTCTTTCAAACAAAAGGATGTTTG 14551
Query 15981 TTTTTCCTTCTAATGAAATATTTTCCATAAAATCAAAAGGATTTT----TTGAACAATAG 16036
| || | ||| | |||| | |||||||| || ||||| || |||| ||| | ||
Sbjct 14550 TCTTCCTTTCCAGTGAAGTGTTTTCCATGAAGTCAAATGGGTTTTAGACTTGGA-AAGCC 14492
Query 16037 TATTTATCGCATCCCAATTCCAACAATAATCTATCCGCCACAAATTCTATATACTGTTTC 16096
| ||| || |||| |||| || | || | ||||||||||| || ||||| |||
Sbjct 14491 TTGTTA---CAACCCAGCTCCAGCAGGAGCCTGTTGGCCACAAATTCAATGTACTGCTTC 14435
Query 16097 ATTAAATCACAGTTCATTCCTATTAATTTAACAGGGATTGCTTCTGTTAAAAAAtttttt 16156
| ||| ||| ||||| || | | || || || | || ||||| | || || | |
Sbjct 14434 ACCAAAGTACAATTCATCCCATTGAGCTTCACTGGCAAGGCCTCTGTGAGGAACTTCTGT 14375
Query 16157 tCTATATTAACCGCTTCAATGATTATATCTCTTACTACACT-ATTTAACGGAGGGTTTAA 16215
| ||| ||||| | | || || || || ||||| | || || || | || ||
Sbjct 14374 TTTATCCTAACCACATTGATAATGATTTCATTTACT-CTCTGATCCAAATGTTTGTGTAG 14316
Query 16216 TAAGTGTTTAAACATTATACAAGCAAAATCACAATGCAATCCTTCGTCCCTACTTATTAA 16275
| |||||| ||||| | || ||||| ||||| ||||| ||| | || || | || |
Sbjct 14315 CAGGTGTTTGAACATCAGGCAGGCAAAGTCACAGTGCAACCCT-CATCTCTGTTAATAAG 14257
Query 16276 CTCGTTTGAAAATGTAAGACCTGGCATTAGTCCTCGTTTTTTAATCCAAAATATAGCGGC 16335
||| || || ||||| || || ||||| || ||||| || || | || ||||| |
Sbjct 14256 CTCATTGGAGAATGTGAGGCCAGGCATCAGCCCTCGCTTCTTGAGCCCGAATATCAATGT 14197
Query 16336 AAATGAACCAGAAAAGAATATACCTTCAACTGCGGCAAATGCAACCAATCGCTCACCGTA 16395
| || ||||||||||| || ||||| | || ||||| | |||| || || || ||
Sbjct 14196 GGAAGACCCAGAAAAGAAGATTCCTTCCATGGCAGCAAAGGTCACCACACGATCTCCATA 14137
Query 16396 --CGTTCTAtttttactttctatccattttttagcccaatttg-ctttttgtttAACACA 16452
| || ||| | | | ||||| || || | || ||| ||| |||||
Sbjct 14136 GGGGGCCTCTTTGTCC--CCAATCCAACGCAAGGCTCAGTCTGTCTTCTTG----ACACA 14083
Query 16453 GTTCATGTTCTCTATTGCATTAAATAAATAAt-ttttttCTTTGCTATCTAAAATATAAG 16511
||| | || || | || || | | | | ||||| | || ||| ||||
Sbjct 14082 AGGCATCATTTCAATGACGTTGAAGAGGCACTCCCTCTTCTTGGGGTCCTTGAATGTAAG 14023
Query 16512 TATCTATTAGTAAACTATACATTTCTGAATGAATATTCTCCATTGCTATCTGAAAACCAT 16571
| ||||| || || ||||||| || ||||| || || ||||| || | ||| || || |
Sbjct 14022 TGTCTATGAGGAAGCTATACACCTCAGAATGTATGTTTTCCATGGCAACCTGGAAGCCGT 13963
Query 16572 AAAAGCATCTAGCTTCGGATATTTGTACTTCAGAGTAAAACCTTTCTGCTAAGTTTTCGT 16631
| ||||| | |||| | || || ||||| | ||||| || | |||||| | |
Sbjct 13962 AGAAGCAGCAGGCTTTTGTGATCTGAACTTCCTGGCTAAACCGCTCCACCAAGTTTGCAT 13903
Query 16632 TAACTATTCCATCGCTAGCTGCAAAAAACGCAAGTATGTG 16671
| | || ||||| || ||||||| ||||| || | |||
Sbjct 13902 TCATGATGCCATCACTCACTGCAAAGAACGCCAGGACGTG 13863
>seq32390
Length=18494
Score = 98.7 bits (108), Expect = 9e-16
Identities = 108/144 (75%), Gaps = 0/144 (0%)
Strand=Plus/Minus
Query 15885 TTTAAAAATCAATATCTAGAGAAAACACATTATCTTTTTTATTTGACATAACTGACATTT 15944
|| ||||||| ||| | | || ||||||||| | | | || ||| |||| |
Sbjct 8493 TTCAAAAATCTGCATCCAAGGTGAAGACATTATCTGTGGTTTCTGCCATCACTGCAAAAC 8434
Query 15945 TTTGATATTCACTAACTCTCTTTTCAAAGAAATTTGTTTTTCCTTCTAATGAAATATTTT 16004
||||| || ||||| || ||||||||||||||||| |||||||| ||||| ||||
Sbjct 8433 GCTGATACTCTGAAACTCGTTTCTCAAAGAAATTTGTTTTCCCTTCTAAAGAAATGTTTT 8374
Query 16005 CCATAAAATCAAAAGGATTTTTTG 16028
||||||||||||| ||||||| ||
Sbjct 8373 CCATAAAATCAAAGGGATTTTCTG 8350
Score = 91.5 bits (100), Expect = 1e-13
Identities = 82/103 (80%), Gaps = 0/103 (0%)
Strand=Plus/Minus
Query 16047 ATCCCAATTCCAACAATAATCTATCCGCCACAAATTCTATATACTGTTTCATTAAATCAC 16106
|||| | ||||| |||||||| || || ||||| || |||||||||||||| ||| |||
Sbjct 4259 ATCCAAGTTCCACAAATAATCTGTCAGCTACAAACTCAATATACTGTTTCATCAAAACAC 4200
Query 16107 AGTTCATTCCTATTAATTTAACAGGGATTGCTTCTGTTAAAAA 16149
|||||||||| || | ||| || | ||||||||||||||
Sbjct 4199 AGTTCATTCCAATGAGGCCAACTGGCAAGGCTTCTGTTAAAAA 4157
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 461486373858600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |