Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pteronotus_20parnellii_20[genbank_20GCA_5F000465405.1_202013-09-13] 177,401 sequences; 1,960,317,893 total letters Query= NC_002642.1 Length=144575 Score E Sequences producing significant alignments: (Bits) Value seq41434 152 5e-32 seq39192 143 2e-29 seq32390 98.7 9e-16 >seq41434 Length=11022 Score = 152 bits (168), Expect = 5e-32 Identities = 482/740 (65%), Gaps = 18/740 (2%) Strand=Plus/Minus Query 15929 GACATAACTGACATTTTTTGATATTCACTAACTCTCTTTTCAAAGAAATTTGTTTTTCCT 15988 ||||| | | ||| | |||||||| | | || || |||||||| || || || || Sbjct 7898 GACATCATTCCCATCCTCTGATATTCGCCTTCGCTTTTCTCAAAGAAGTTGGTCTTCCCC 7839 Query 15989 TCTAATGAAATATTTTCCATAAAATCAAAAGGATTTTTTGAACAATAGTATTTATCGC-- 16046 || | ||||||||| ||||| || ||||| | |||| ||| | | | | || Sbjct 7838 TCCAGTGAAATATTCTCCATGAAGTCAAACCGGTTTTC--AACT-TGGAAAGCCTTGCTA 7782 Query 16047 -ATCCCAATTCCAACAATAATCTATCCGCCACAAATTCTATATACTGTTTCATTAAATCA 16105 | ||||| |||| || | || || |||| |||| || ||||| ||||| ||| Sbjct 7781 AAACCCAACTCCAGCAGGAGCCTGTCAGCCATGAATTGAATGTACTGCTTCATCAAAGTG 7722 Query 16106 CAGTTCATTCCTATTAATTTAACAGGGATTGCTTCTGTTAAAAAAtttttttCTATATTA 16165 || ||||| || || | || || || | || || || | || | | |||||| || Sbjct 7721 CAATTCATGCCAATGAGCTTCACTGGCAAGGCCTCGGTGAGGAACTCCTCTTCTATCCTA 7662 Query 16166 ACCGCTTCAATGATTATATCTCTTACTACACTATTTAACGGAGGGTTT----AATAAGTG 16221 ||||| | ||| ||||| || ||||| | || | | || ||||| || | ||| Sbjct 7661 ACCGCATTAATAATTATTTCATTTACT-CTCTGCT---CTGAAGGTTTGTACAACAGGTG 7606 Query 16222 TTTAAACATTATACAAGCAAAATCACAATGCAATCCTTCGTCCCTACTTATTAACTCGTT 16281 ||| ||||| | || ||||| || || || | || || || || || || | |||| | Sbjct 7605 TTTGAACATCAGGCAGGCAAAGTCCCAGTGATAGCCCTCATCTCTGCTAATAAGCTCGCT 7546 Query 16282 TGAAAATGTAAGACCTGGCATTAGTCCTCGTTTTTTAATCCAAAATATAGCGGCAAATGA 16341 || ||||| ||||| ||||| || ||||| || | | ||| ||||| | | || || Sbjct 7545 GGAGAATGTGAGACCAGGCATCAGCCCTCGCTTCCTGAGCCAGAATATTGATGTGAAAGA 7486 Query 16342 ACCAGAAAAGAATATACCTTCAACTGCGGCAAATGCAACCAATCGCTCACCGTACGT--T 16399 ||||||||||| | |||| || | ||||| || |||| |||| || | || | Sbjct 7485 CCCAGAAAAGAAGGTTCCTTGCACCTCAGCAAAGGCCACCACATGCTCTCCACAGGTGGT 7426 Query 16400 CTAtttttactttctatccattttttagcccaatttgctttttgtttAACACAGTTCATG 16459 || ||| | | | ||||| ||||| | | | || | || ||||| ||| Sbjct 7425 CTCTTTGTCC--CCGATCCAGCGCAAGGCCCAGTATACCTTCTTCTTGACACAAGGCATC 7368 Query 16460 TTCTCTATTGCATTAAATAAATAAtttttttCTTTGCTATCTAAAATATAAGTATCTATT 16519 | | ||||| || | | | |||| ||| |||| |||||||| | | Sbjct 7367 AGTTTGAAGGCATTGAAGAGGAACTCCCTTTCCTTGTGATCTTTGATATAAGTGTTGAGG 7308 Query 16520 AGTAAACTATACATTTCTGAATGAATATTCTCCATTGCTATCTGAAAACCATAAAAGCAT 16579 || | || ||||| || ||||| ||||| ||||| || ||||| || || || ||||| Sbjct 7307 AGGAGGCTGTACATCTCAGAATGTATATTTTCCATGGCAATCTGGAAGCCGTAGAAGCAG 7248 Query 16580 CTAGCTTCGGATATTTGTACTTCAGAGTAAAACCTTTCTGCTAAGTTTTCGTTAACTATT 16639 | ||||| | || || |||| | | || || | |||||||| || || || Sbjct 7247 CAGGCTTCTGTGATCTGAACTTGCTGGCTATACTGCTCCACCAAGTTTTCATTCACAATG 7188 Query 16640 CCATCGCTAGCTGCAAAAAA 16659 |||| || ||| |||| || Sbjct 7187 CCATTACTTGCTACAAAGAA 7168 >seq39192 Length=20454 Score = 143 bits (158), Expect = 2e-29 Identities = 496/760 (65%), Gaps = 29/760 (4%) Strand=Plus/Minus Query 15929 GACATAACTGACATTTTTTGATATTCACTAACTCT-CT-TTTCAAAGAAA------TTTG 15980 ||||| ||| ||| | ||||| |||| ||||| || ||||||| ||| |||| Sbjct 14610 GACATCACTCCCATCCTCTGATACTCACCTACTCTTCTCTTTCAAACAAAAGGATGTTTG 14551 Query 15981 TTTTTCCTTCTAATGAAATATTTTCCATAAAATCAAAAGGATTTT----TTGAACAATAG 16036 | || | ||| | |||| | |||||||| || ||||| || |||| ||| | || Sbjct 14550 TCTTCCTTTCCAGTGAAGTGTTTTCCATGAAGTCAAATGGGTTTTAGACTTGGA-AAGCC 14492 Query 16037 TATTTATCGCATCCCAATTCCAACAATAATCTATCCGCCACAAATTCTATATACTGTTTC 16096 | ||| || |||| |||| || | || | ||||||||||| || ||||| ||| Sbjct 14491 TTGTTA---CAACCCAGCTCCAGCAGGAGCCTGTTGGCCACAAATTCAATGTACTGCTTC 14435 Query 16097 ATTAAATCACAGTTCATTCCTATTAATTTAACAGGGATTGCTTCTGTTAAAAAAtttttt 16156 | ||| ||| ||||| || | | || || || | || ||||| | || || | | Sbjct 14434 ACCAAAGTACAATTCATCCCATTGAGCTTCACTGGCAAGGCCTCTGTGAGGAACTTCTGT 14375 Query 16157 tCTATATTAACCGCTTCAATGATTATATCTCTTACTACACT-ATTTAACGGAGGGTTTAA 16215 | ||| ||||| | | || || || || ||||| | || || || | || || Sbjct 14374 TTTATCCTAACCACATTGATAATGATTTCATTTACT-CTCTGATCCAAATGTTTGTGTAG 14316 Query 16216 TAAGTGTTTAAACATTATACAAGCAAAATCACAATGCAATCCTTCGTCCCTACTTATTAA 16275 | |||||| ||||| | || ||||| ||||| ||||| ||| | || || | || | Sbjct 14315 CAGGTGTTTGAACATCAGGCAGGCAAAGTCACAGTGCAACCCT-CATCTCTGTTAATAAG 14257 Query 16276 CTCGTTTGAAAATGTAAGACCTGGCATTAGTCCTCGTTTTTTAATCCAAAATATAGCGGC 16335 ||| || || ||||| || || ||||| || ||||| || || | || ||||| | Sbjct 14256 CTCATTGGAGAATGTGAGGCCAGGCATCAGCCCTCGCTTCTTGAGCCCGAATATCAATGT 14197 Query 16336 AAATGAACCAGAAAAGAATATACCTTCAACTGCGGCAAATGCAACCAATCGCTCACCGTA 16395 | || ||||||||||| || ||||| | || ||||| | |||| || || || || Sbjct 14196 GGAAGACCCAGAAAAGAAGATTCCTTCCATGGCAGCAAAGGTCACCACACGATCTCCATA 14137 Query 16396 --CGTTCTAtttttactttctatccattttttagcccaatttg-ctttttgtttAACACA 16452 | || ||| | | | ||||| || || | || ||| ||| ||||| Sbjct 14136 GGGGGCCTCTTTGTCC--CCAATCCAACGCAAGGCTCAGTCTGTCTTCTTG----ACACA 14083 Query 16453 GTTCATGTTCTCTATTGCATTAAATAAATAAt-ttttttCTTTGCTATCTAAAATATAAG 16511 ||| | || || | || || | | | | ||||| | || ||| |||| Sbjct 14082 AGGCATCATTTCAATGACGTTGAAGAGGCACTCCCTCTTCTTGGGGTCCTTGAATGTAAG 14023 Query 16512 TATCTATTAGTAAACTATACATTTCTGAATGAATATTCTCCATTGCTATCTGAAAACCAT 16571 | ||||| || || ||||||| || ||||| || || ||||| || | ||| || || | Sbjct 14022 TGTCTATGAGGAAGCTATACACCTCAGAATGTATGTTTTCCATGGCAACCTGGAAGCCGT 13963 Query 16572 AAAAGCATCTAGCTTCGGATATTTGTACTTCAGAGTAAAACCTTTCTGCTAAGTTTTCGT 16631 | ||||| | |||| | || || ||||| | ||||| || | |||||| | | Sbjct 13962 AGAAGCAGCAGGCTTTTGTGATCTGAACTTCCTGGCTAAACCGCTCCACCAAGTTTGCAT 13903 Query 16632 TAACTATTCCATCGCTAGCTGCAAAAAACGCAAGTATGTG 16671 | | || ||||| || ||||||| ||||| || | ||| Sbjct 13902 TCATGATGCCATCACTCACTGCAAAGAACGCCAGGACGTG 13863 >seq32390 Length=18494 Score = 98.7 bits (108), Expect = 9e-16 Identities = 108/144 (75%), Gaps = 0/144 (0%) Strand=Plus/Minus Query 15885 TTTAAAAATCAATATCTAGAGAAAACACATTATCTTTTTTATTTGACATAACTGACATTT 15944 || ||||||| ||| | | || ||||||||| | | | || ||| |||| | Sbjct 8493 TTCAAAAATCTGCATCCAAGGTGAAGACATTATCTGTGGTTTCTGCCATCACTGCAAAAC 8434 Query 15945 TTTGATATTCACTAACTCTCTTTTCAAAGAAATTTGTTTTTCCTTCTAATGAAATATTTT 16004 ||||| || ||||| || ||||||||||||||||| |||||||| ||||| |||| Sbjct 8433 GCTGATACTCTGAAACTCGTTTCTCAAAGAAATTTGTTTTCCCTTCTAAAGAAATGTTTT 8374 Query 16005 CCATAAAATCAAAAGGATTTTTTG 16028 ||||||||||||| ||||||| || Sbjct 8373 CCATAAAATCAAAGGGATTTTCTG 8350 Score = 91.5 bits (100), Expect = 1e-13 Identities = 82/103 (80%), Gaps = 0/103 (0%) Strand=Plus/Minus Query 16047 ATCCCAATTCCAACAATAATCTATCCGCCACAAATTCTATATACTGTTTCATTAAATCAC 16106 |||| | ||||| |||||||| || || ||||| || |||||||||||||| ||| ||| Sbjct 4259 ATCCAAGTTCCACAAATAATCTGTCAGCTACAAACTCAATATACTGTTTCATCAAAACAC 4200 Query 16107 AGTTCATTCCTATTAATTTAACAGGGATTGCTTCTGTTAAAAA 16149 |||||||||| || | ||| || | |||||||||||||| Sbjct 4199 AGTTCATTCCAATGAGGCCAACTGGCAAGGCTTCTGTTAAAAA 4157 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 461486373858600