Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pteronotus_20parnellii_20[genbank_20GCA_5F000465405.1_202013-09-13] 177,401 sequences; 1,960,317,893 total letters Query= NC_002665.1 Length=108873 Score E Sequences producing significant alignments: (Bits) Value seq79867 1602 0.0 seq113390 158 8e-34 >seq79867 Length=81550 Score = 1602 bits (1776), Expect = 0.0 Identities = 1343/1643 (82%), Gaps = 40/1643 (2%) Strand=Plus/Minus Query 107144 AGGCAGGACTTGACTGAGGATATTTGTCTATAGAAGACATCTATCTTTACCATCACTCTG 107203 ||||||| || ||||||| |||||||||| |||||| || ||| ||| |||| ||| || Sbjct 74222 AGGCAGGTCTCAACTGAGGGTATTTGTCTAGAGAAGAAATATATTTTTGCCATTACTTTG 74163 Query 107204 GAGTTGAACTTGATGTTC-TGG------ATT------AGTTTGTAATTAAAGGCATTTTG 107250 ||| || ||||||||||| ||| ||| ||||||||| | ||| ||||||| Sbjct 74162 GAGCTGGACTTGATGTTCCTGGGAACACATTCAGGCGAGTTTGTAACTGAAGACATTTTG 74103 Query 107251 TTCTGTCCAAGGAT------CTCCTCCTCCACCTTGCCTGTGCCCAAACTCTCCTGATCT 107304 |||||||||||||| ||||| |||| |||| |||||||||||||||| | ||||| Sbjct 74102 TTCTGTCCAAGGATTCCATCCTCCTGCTCCTCCTTCCCTGTGCCCAAACTCTGCCGATCT 74043 Query 107305 CCCATCCCATGAAGATGGCTGGGTGGAAGAAGAAGCTTTGCCGGGGACATCATCTGTGGG 107364 || || | ||||||||| | |||||||| ||| | ||| || ||| | ||||||| Sbjct 74042 CC-ATGCTGTGAAGATGGTTTGGTGGAAGCAGAGACGCTGCAGGCAGCATTACCTGTGGG 73984 Query 107365 CCCTGGGCTGCTATATGCTGCTGGCCGTTGTTTCTCTGAGACTTTCCCTCAGGTTTAAAT 107424 |||||||||||||| ||||||||||| ||||| ||||||||||||| | || || |||| Sbjct 73983 CCCTGGGCTGCTATTTGCTGCTGGCCATTGTTGCTCTGAGACTTTCTTTTAGATTGAAAT 73924 Query 107425 GTGATGTAGATTCCTTGGATCTGGAGTCCAGGGACTTCCAGAGTCAGCACTGTAGGGACA 107484 | | | ||||| ||||||||||||||| |||||| || || |||||| ||||||| Sbjct 73923 GCAACTTTGATTCTCTGGATCTGGAGTCCAAGGACTTTCAAAGCAGGCACTGCAGGGACA 73864 Query 107485 TGTTGTACAATAGCCTGAAGCTGCCAGCAAAGAGATCCATCAACTGTTCTGGGATCACGC 107544 | |||||||| ||| ||||||||||||||||||||||||||||| | ||| | Sbjct 73863 TCTTGTACAAGTCCCTAGGATTGCCAGCAAAGAGATCCATCAACTGTTCTAGAATCGTCC 73804 Query 107545 GAGGGGACCAGGAAGCAGTGGTCCAGGCCCTCCTAGACAACCTGGAAGTGAAGAAAAAGC 107604 ||||||| ||||||||||| |||||||||| ||||| ||||| || ||||| || | Sbjct 73803 GAGGGGATAAGGAAGCAGTGACTGAGGCCCTCCTGGACAAGCTGGAGGTCAAGAAGAAAC 73744 Query 107605 GGTCGCCTCTCACTGGCACCTATTACCTCAACATAACCAGAGACTGTGAGCGCTTCAAGG 107664 || ||| |||| | ||| | ||||||||||| ||||||||||||||| ||| |||| Sbjct 73743 GGGAACCTTTCACAGACACTGACTACCTCAACATGACCAGAGACTGTGAGTACTTTAAGG 73684 Query 107665 CCCAAAGGAAGTTCATACAGTTCCCACTGAGTAAAGAAGAGCTAGACTTCCCCATTGCCT 107724 || | |||||||| ||||| | | |||| || |||||||| |||||||||| ||||| | Sbjct 73683 CCAACAGGAAGTTTATACAATACTCACTCAGCAAAGAAGAATTAGACTTCCCTATTGCAT 73624 Query 107725 ACTCGATGGTGGTCCATGAGAAGATTGAAAACTTTGAACGGCTGCTGCGAGCCGTGTATG 107784 |||| ||||||||||||||||||||||||||||||||| |||||||| |||| ||||||| Sbjct 73623 ACTCTATGGTGGTCCATGAGAAGATTGAAAACTTTGAAAGGCTGCTGAGAGCTGTGTATG 73564 Query 107785 CCCCTCAGAACATATACTGTGTCCACGTGGATGTGAAGTCCCCAGAGACTTTCAAAGAGG 107844 |||||||||| ||||| ||||| || ||||||| ||| |||||||| ||||||||||||| Sbjct 73563 CCCCTCAGAATATATATTGTGTGCATGTGGATGAGAAATCCCCAGAAACTTTCAAAGAGG 73504 Query 107845 CGGTCAAGGCCATTATTTCCTGCTTCCCCAATGTCTTCATGGCCAGTAAGTTGGTCCCGG 107904 | || ||||| |||||||| |||||||| ||||| ||| |||||||||||||||| | | Sbjct 73503 CAGTGAAGGCAATTATTTCATGCTTCCCAAATGTTTTCCTGGCCAGTAAGTTGGTTCGAG 73444 Query 107905 TGGTTTATGCCTCCTGGTCCAGAGTGCAAGCTGACCTGAACTGTATGGAAGACTTGCTCC 107964 |||||||||||||||||||||| || ||||||||||||||||||||||||||| |||| | Sbjct 73443 TGGTTTATGCCTCCTGGTCCAGGGTACAAGCTGACCTGAACTGTATGGAAGACCTGCTTC 73384 Query 107965 AGAGCTCAGTGCCATGGAAGTACTTACTGAATACATGCGGGACAGACTTCCCCATAAAGA 108024 ||||||||||||||||||| ||||| || ||||| || || |||||||| || ||||||| Sbjct 73383 AGAGCTCAGTGCCATGGAAATACTTCCTAAATACGTGTGGAACAGACTTTCCTATAAAGA 73324 Query 108025 CCAATGCCGAGATGGTCCTGGCCCTCAAGATGTTGAAGGGTAAGAACAGTATGGAGTCTG 108084 ||||||| ||||||||||||||||||||||||||||| || ||||||||||||||||| | Sbjct 73323 CCAATGCTGAGATGGTCCTGGCCCTCAAGATGTTGAATGGGAAGAACAGTATGGAGTCAG 73264 Query 108085 AGGTACCTTCTGAGTCCaaaaaaaaTCGCTGGAAATACCGCTATGAGGTGACAGACACAC 108144 | |||||| |||| |||||||| |||||||||||| | |||||||||| ||||||| Sbjct 73263 AAGTACCTAGTGAGGCCAAAAAATCTCGCTGGAAATATCACTATGAGGTGGAAGACACAA 73204 Query 108145 TGTACCCTACCAGCAAGATGAAGGACCCTCCCCCTGATAATTTACCCATGTTCACAGGGA 108204 | || ||||||||||||||||||||||||||| |||||||||| |||||||| || | Sbjct 73203 TACACATAACCAGCAAGATGAAGGACCCTCCCCCTTATAATTTACCTATGTTCACGGGTA 73144 Query 108205 ATGCCTATTTTGTGGCCTCTCGAGCCTTTGTCCAACATGTCTTAGACAACCCTAAATCCC 108264 ||||||| | ||||| ||||||| ||||||||| || ||||||| ||||| ||| ||| Sbjct 73143 ATGCCTACATCGTGGCTTCTCGAGGCTTTGTCCAGCAGATCTTAGAGAACCCCAAAGCCC 73084 Query 108265 AAAGACTGGTTGAATGGGTCAAAGACACCTATAGCCCCGACGAACACCTCTGGGCCACCC 108324 || |||| |||||||||| ||||| ||||||||||| || ||||||||||||||||| | Sbjct 73083 AACAACTGATTGAATGGGTAAAAGATACCTATAGCCCTGATGAACACCTCTGGGCCACGC 73024 Query 108325 TTCAGCGTGCTCCGTGGATGCCTGGCTCTGTTCCTAGCCACCCCAAGTATCACATCTCAG 108384 |||||||||| || |||||||||||||||||||| ||||||||||| |||||| |||| Sbjct 73023 TTCAGCGTGCACCATGGATGCCTGGCTCTGTTCCCTACCACCCCAAGTTTCACATGTCAG 72964 Query 108385 ACATGACTGCCATCGCCAGGCTCGTCAAGTGGCAGTACCACGAGGGAGATGTCAGCATGG 108444 ||||| || |||| |||||||| |||||||||||| ||| || ||||| |||| |||| Sbjct 72963 ACATGGCTTCCATTGCCAGGCTGGTCAAGTGGCAGGGCCATGAAGGAGACATCAGTATGG 72904 Query 108445 GGGCGCCTTATGCACCCTGCTCTGGAATCCATCGGAGGGCCATCTGCATTTACGGGGCCG 108504 |||| |||||| |||| |||||||||| ||| | || | |||| ||||| ||| | | Sbjct 72903 GGGCACCTTATCCACCTTGCTCTGGAACCCACCAACGGTCTGTCTGTATTTATGGGACTG 72844 Query 108505 GGGACCTGTACTGGATTCTCCAGAACCATCACCTCTTGGCAAACAAGTTTGACCCGAGGG 108564 ||||||| |||||||||| |||||||||||||| ||||| |||||||||||||| | || Sbjct 72843 GGGACCTTCACTGGATTCTTCAGAACCATCACCTGTTGGCCAACAAGTTTGACCCAAAGG 72784 Query 108565 TGGATGATAACGTCCTGCAGTGCTTAGAAGAGTACCTACGTCATAAGGCCATCTATGGGA 108624 |||||||||| || || |||||||| || || ||| ||||| ||||| |||||||||| | Sbjct 72783 TGGATGATAATGTTCTTCAGTGCTTGGAGGAATACTTACGTTATAAGACCATCTATGGAA 72724 Query 108625 CTGAACT-TTGAGCTGCA----------------CTGTGGGCCAGGGAC-TGTGCCAACA 108666 ||||||| | ||| | || ||||||| || | | ||||| |||| Sbjct 72723 CTGAACTCTAGAGATACACTAAGACTGTTGCTACCTGTGGGGCAAGACCATGTGCAAACA 72664 Query 108667 TGCCCAGGGCGTACTGGTACTGTGTGGGGTGGGGGACGAGG-GCTGTGGAATCCATGGCA 108725 ||||||| || |||| | ||||| |||||| | | ||| || ||||||||| ||| Sbjct 72663 TGCCCAGAATGTGCTGG-GCAGTGTGTGGTGGGAGGCCAGGTTCTCTGGAATCCAAGGCG 72605 Query 108726 TCCCCCAGGGTCAGAGGGCTGCT 108748 ||||||||||||| |||||||| Sbjct 72604 TCCCCCAGGGTCAAGGGGCTGCT 72582 >seq113390 Length=24774 Score = 158 bits (174), Expect = 8e-34 Identities = 576/888 (65%), Gaps = 33/888 (4%) Strand=Plus/Plus Query 107688 CCACTGAGTAAAGAAGAGCTAGACTTCCCCATTGCCTACTCGATGGTGGTCCATGAGAAG 107747 || || ||||||||||| ||| || || || || || || || ||||| ||| | || Sbjct 7106 CCTCTTAGTAAAGAAGAAGCAGAGTTTCCAATAGCATATTCCATAGTGGTTCATCACAAA 7165 Query 107748 ATTGAAAACTTTGAACGGCTGCTGCGAGCCGTGTATGCCCCTCAGAACATATACTGTGTC 107807 ||||||| |||| |||| ||| | ||| | ||| |||||||| | ||||| | Sbjct 7166 ATTGAAATGCTTGACAGGCTCCTGAGGGCCATCTATATGCCTCAGAATTTCTACTGCATT 7225 Query 107808 CACGTGGATGTGAAGTCCCCAGAGACTTTCAAAGAGGCGGTCAAGGCCATTATTTCCTGC 107867 || ||||| || || || | || | ||| || | | ||| ||||| Sbjct 7226 CATGTGGACAGAAAATCGGAGGATTCCTTTCTGGCGGCAGTGACTGGTATTGCATCCTGT 7285 Query 107868 TTCCCCAATGTCTTCATGGCCAGTAAGTTGGTCCCGGTGGTTTATGCCTCCTGGTCCAGA 107927 ||| |||||||| |||||||| || ||| | ||||| ||||| || ||| | Sbjct 7286 TTCAGTAATGTCTTTGTGGCCAGTCAGCTGGAGACTGTGGTGTATGCATCATGGAGTCGG 7345 Query 107928 GTGCAAGCTGACCTGAACTGTATGGAAGACTTGCTCCAGAGCTCAGTGCCA--TGGAAGT 107985 || || || ||||| ||||||||| | ||| | || |||| | | ||| ||||||| Sbjct 7346 GTTCAGGCCGACCTCAACTGTATGCAGGACCT-CTACAGAA-TGAATGCAGATTGGAAGT 7403 Query 107986 ACTTACTGAATACATGCGGGACAGACTTCCCCATAAAGACCAATGCCGAGATGGTCCTGG 108045 |||| | ||| || || | || || || || || ||||| || || ||| | Sbjct 7404 ACTTGATAAATCTCTGTGGTATGGATTTTCCTATTAAAACCAACCTGGAAATTGTCAGGA 7463 Query 108046 CCCTCAAGATGTTGAAGGGTAAGAACAGTATGGAGTCTGAGGTA---CCTTCTGAGTCCa 108102 |||||| ||| | ||| | |||| |||| | ||| | || || | | Sbjct 7464 AACTCAAGTCGTTAATGGGAGAAAACAACCTGGAAACAGAGAAAATGCCATCCCAT---A 7520 Query 108103 aaaaaaaTCGCTGGAAATACCGCTATGA-------GGTGACAGACACACTG-TACCCTAC 108154 ||||| | | |||||| | | |||| | || | || ||| ||| Sbjct 7521 AAAAAGAAAGGTGGAAAAAACATTATGCAATCTTTGATGGAAAACTCACAAATACGGGGA 7580 Query 108155 CAG-CAAGATGAAGGACCCTCCCCCTGATAATTTACCCATGTTCACAGGGAATGCCTATT 108213 | | ||| ||| |||||| | ||| | ||| |||| |||| | |||||||| Sbjct 7581 CTGACAAAATGCC---CCCTCCTCTTGAAAC---ACCTCTGTTTTCAGGCAGTGCCTATT 7634 Query 108214 TTGTGGCCTCTCGAGCCTTTGTCCAACATGTCTTAGACAACCCTAAATCCCAAAGACTGG 108273 |||||| | | | | ||| | |||| |||| || ||| ||| | | Sbjct 7635 TTGTGGTCAGTAGGAAGTATGTGGAGTATGTTCTAGAGAATGAAAAAATCCAGAAGTTTA 7694 Query 108274 TTGAATGGGTCAAAGACACCTATAGCCCCGACGAACACCTCTGGGCCACCCTTCAGCGTG 108333 | || |||| |||||||| || ||||| ||||| | ||||||||||| ||||| | | Sbjct 7695 TGGAGTGGGCAAAAGACACATACAGCCCGGACGAGTATCTCTGGGCCACTATTCAGAG-G 7753 Query 108334 CTCCGTGGA-TGCCTGGCTCTGT-TCCT--AGCCACCCCAAGTATCACATCTCAGACATG 108389 ||| || | | || ||||| | |||| |||||| |||||| |||| || |||||| Sbjct 7754 ATCCCTGAAGTTCCAGGCTCATTGTCCTTAAGCCAC---AAGTATGACATGTCTGACATG 7810 Query 108390 ACTGCCATCGCCAGGCTCGTCAAGTGGCAGTACCACGAGGGAGATGTCAGCATGGGGGCG 108449 || || || ||| | ||||||||||||||| || || || | || |||||| Sbjct 7811 CAGGCAATTGCTAGGTTTGTCAAGTGGCAGTACTTTGAAGGTGACATTTCCAAGGGGGCC 7870 Query 108450 CCTTATGCACCCTGCTCTGGAATCCATCGGAGGGCCATCTGCATTTACGGGGCCGGGGAC 108509 || ||| |||||||| || ||||| | | || | || ||| ||| || || ||| Sbjct 7871 CCCTATCCACCCTGCAGCGGTGTCCATGTGCGCTCCGTGTGTGTTTTCGGAGCAGGTGAC 7930 Query 108510 CTGTACTGGATTCTCCAGAACCATCACCTCTTGGCAAACAAGTTTGAC 108557 || ||||||| || | ||||| ||| | || || || ||||||||| Sbjct 7931 TTGAACTGGATACTGCGCAACCACCACTTATTTGCCAATAAGTTTGAC 7978 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 347515816843074