Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pteronotus_20parnellii_20[genbank_20GCA_5F000465405.1_202013-09-13] 177,401 sequences; 1,960,317,893 total letters Query= NC_002816.1 Length=123500 Score E Sequences producing significant alignments: (Bits) Value seq79216 109 4e-19 seq161317 107 2e-18 seq548 107 2e-18 seq94837 100 2e-16 seq8818 100 2e-16 seq97981 98.7 8e-16 seq85393 91.5 1e-13 seq110331 89.7 4e-13 >seq79216 Length=33065 Score = 109 bits (120), Expect = 4e-19 Identities = 161/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 45109 GCCACCTCTCAATCTTAATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTT 45168 ||||||||||| | | |||| |||||| ||| ||| ||||| ||||||||||| Sbjct 3406 GCCACCTCTCAGGCGCAGGACCAGGTGCAGGGTGGACTCTTTCTGGATGTTGTAGTCAGA 3465 Query 45169 CAGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGG 45228 || ||| | || ||||| || || || || || || | || ||| |||||||| || Sbjct 3466 AAGAGTGCGGCCATCCTCCAGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTCGGGGGG 3525 Query 45229 CACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCAC 45288 | || || || ||| || || ||| || | | | | |||| | |||||| Sbjct 3526 GATGCCTTCTTTATCCTGGATCTTGGCCTTCACATTCTCAATGGTGTCGCTCGGCTCCAC 3585 Query 45289 CTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACAAAGATTTGCAT 45336 ||||| ||| || |||||||| ||||| |||||||| ||||| ||||| Sbjct 3586 CTCCAGGGTGATGGTCTTGCCGGTCAGGGTCTTCACGAAGATCTGCAT 3633 Score = 105 bits (116), Expect = 5e-18 Identities = 162/231 (70%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 45110 CCACCTCTCAATCTTAATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTC 45169 |||||||||| | | |||| |||||| ||| ||| ||||| ||||||||||| Sbjct 3635 CCACCTCTCAGGCGCAGGACCAGGTGCAGGGTGGACTCTTTCTGGATGTTGTAGTCAGAA 3694 Query 45170 AGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGC 45229 || ||| | || ||||| || || || || || || | || ||| ||||| || || Sbjct 3695 AGAGTGCGGCCATCTTCCAGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTCTGGGGGG 3754 Query 45230 ACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACC 45289 | || ||||| || || || || || | | | | |||| | ||||||| Sbjct 3755 ATGCCTTCCTTATCTTGGATCTTGGCTTTCACATTCTCAATGGTGTCGCTGGGCTCCACC 3814 Query 45290 TCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACAAAGATTTGCATGTTG 45340 |||| ||| || |||||||| ||||| |||||||||||||| ||||| ||| Sbjct 3815 TCCAGGGTGATGGTCTTGCCTGTCAGGGTCTTCACAAAGATCTGCATTTTG 3865 >seq161317 Length=2104 Score = 107 bits (118), Expect = 2e-18 Identities = 141/193 (73%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 45145 CTCCTTCTGAATGTTGTAGTCG-TTCAGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGA 45203 |||||||||||||||||||||| || || | |||| | || |||| || || || |||| Sbjct 1113 CTCCTTCTGAATGTTGTAGTCGCTTAAGGT-GCGACCATCTTCCAACTGCTTACCAGCGA 1171 Query 45204 ATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTTTTGCTTAACCG 45263 | || | |||||||| || || || | ||||||||||||| ||| || ||| || Sbjct 1172 AGATAAGACGCTGTTGATCAGGGGGAATACCCTCCTTGTCCTGAATCTTGCTCTTCACGT 1231 Query 45264 CCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCA 45323 | | |||| | ||| ||||| | ||| || ||||| || || |||||||||| Sbjct 1232 TGTCGATAGTGTCACTGGACTCGACCTCAAGGGTGATGGTCTTTCCGGTGAGAGTCTTCA 1291 Query 45324 CAAAGATTTGCAT 45336 |||| || ||||| Sbjct 1292 CAAAAATCTGCAT 1304 Score = 105 bits (116), Expect = 5e-18 Identities = 148/208 (71%), Gaps = 0/208 (0%) Strand=Plus/Plus Query 45133 GTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTG 45192 ||| || ||| |||||||||||||||||| || || ||| |||| || || || Sbjct 1839 GTGAAGAGTGGACTCCTTCTGAATGTTGTAATCAGAGAGAGTGCGGCCGTCCTCAAGCTG 1898 Query 45193 TTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTT 45252 || |||||||| ||||| || || |||||||| || | |||||||||||| ||| || Sbjct 1899 CTTGCCGGCGAAAATCAAGCGTTGCTGGTCGGGGGGGATGCCCTCCTTGTCCTGAATCTT 1958 Query 45253 TTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGT 45312 ||| || | | |||| | ||| ||||| | ||| || |||||||| || Sbjct 1959 GGACTTGACATTGTCGATAGTGTCGGAAGACTCAACCTCGAGGGTGATGGTCTTGCCGGT 2018 Query 45313 CAGAGTCTTCACAAAGATTTGCATGTTG 45340 || ||||| || ||||| |||||| || Sbjct 2019 CAAGGTCTTGACGAAGATCTGCATGATG 2046 Score = 98.7 bits (108), Expect = 8e-16 Identities = 147/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187 |||||||| || || ||||||||||||||||||||| || || | || || Sbjct 1324 ACCAAGTGGAGAGTAGATTCCTTCTGAATGTTGTAGTCGGAAAGAGTTCGGCCATCTTCA 1383 Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247 ||||| || || ||||| || | |||||||| |||||||| | ||||||||||||| Sbjct 1384 AGTTGCTTGCCAGCGAAGATGAGTCGCTGTTGATCGGGAGGAATACCCTCCTTGTCCTGG 1443 Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307 || || ||| || | | | | || ||| || |||| ||||| ||||| Sbjct 1444 ATCTTGCTCTTCACATTATCAATGGTATCGGATGACTCGACTTCCAGAGTAATGGTCTTT 1503 Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCAT 45336 || || || ||||| || ||||||||||| Sbjct 1504 CCAGTGAGGGTCTTGACGAAGATTTGCAT 1532 Score = 86.0 bits (94), Expect = 5e-12 Identities = 129/182 (71%), Gaps = 6/182 (3%) Strand=Plus/Plus Query 45146 TCCTTCTGAATGTTGTAGTCGTTCAG---TTGGCGATCGTCGTCCAGTTGTTTTCCGGCG 45202 ||||||||||||||||||||| || | ||| ||| ||| ||||| ||||| || Sbjct 1570 TCCTTCTGAATGTTGTAGTCGGCAAGGGTTCGGCCATCTTCG---AGTTGCTTTCCAGCA 1626 Query 45203 AATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTTTTGCTTAACC 45262 || |||| ||||| ||||| ||||| | |||||||||||| ||| ||| |||||| Sbjct 1627 AAGATCAGGCGCTGCTGGTCAGGAGGGATGCCCTCCTTGTCCTGAATCTTTGACTTAACA 1686 Query 45263 GCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTC 45322 | | | | || ||| ||||| | || || |||||||| || || ||||| Sbjct 1687 TTGTCGATGGTATCGGACGACTCGACCTCAAGAGTGATGGTCTTGCCAGTGAGGGTCTTG 1746 Query 45323 AC 45324 || Sbjct 1747 AC 1748 >seq548 Length=19863 Score = 107 bits (118), Expect = 2e-18 Identities = 149/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187 ||||||||||| ||| ||| ||||||||||||||||| || || | || ||| Sbjct 10964 ACCAAGTGCAGGGTGGACTCTTTCTGAATGTTGTAGTCCGAGAGAGTGCAGCCATCCTCC 10905 Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247 || ||||| || | || |||| | ||| ||||| || || | ||||||||||| Sbjct 10904 AGCTGTTTGCCCACAAACATCAGTCACTGCTGGTCAGGTGGGATGCCCTCCTTGTCTTGG 10845 Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307 ||||| || || | | | | |||| | ||| ||||| | ||| || |||||| Sbjct 10844 ATTTTAGCTTTGACATTCTCAATGGTGTCACTGGGCTCGACCTCAAGGGTGATGGTCTTG 10785 Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCAT 45336 || ||||| |||||||||||||| ||||| Sbjct 10784 CCAGTCAGGGTCTTCACAAAGATCTGCAT 10756 >seq94837 Length=4094 Score = 100 bits (110), Expect = 2e-16 Identities = 141/198 (71%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 45146 TCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAAT 45205 |||||||| |||||||||||| |||| ||| | || || || || || || || || Sbjct 4094 TCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGTCCATCCTCGAGCTGCTTGCCAGCAAAG 4035 Query 45206 ATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCC 45265 || | ||||| ||||| || || | |||||||||||| || || ||| || Sbjct 4034 ATGAGTCGCTGCTGGTCAGGGGGGATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTTG 3975 Query 45266 GCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACA 45325 | | | |||| | ||||||||| | ||| |||||||| ||||| || ||||| || Sbjct 3974 TCGATGGTGTCGGAAGACTCCACCTCAAGGGTGATCGTCTTCCCCGTGAGGGTCTTGACG 3915 Query 45326 AAGATTTGCATGTTGCCT 45343 || || ||||| |||||| Sbjct 3914 AAAATCTGCATCTTGCCT 3897 >seq8818 Length=48227 Score = 100 bits (110), Expect = 2e-16 Identities = 150/213 (70%), Gaps = 4/213 (2%) Strand=Plus/Plus Query 45128 ACCAAGTGCAGCGTGCT----CTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTC 45183 ||||||||||||||| ||| ||||||||||||||||| || ||| | || Sbjct 8719 ACCAAGTGCAGCGTGGAGGGACTCTTTCTGAATGTTGTAGTCCGAGAGAGTGCGGCCATC 8778 Query 45184 GTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTC 45243 ||||| |||| || || || |||| ||||| ||||| || || | ||||||||||| Sbjct 8779 CTCCAGCCGTTTGCCCGCAAAAATCAGTCGCTGCTGGTCAGGCGGGATGCCCTCCTTGTC 8838 Query 45244 CGCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGT 45303 ||||| || || | | | |||| | ||| ||||| | ||| || || Sbjct 8839 TTGGATTTTAGCTTTGACATTCTCAGTGGTGTCACTGGGCTCAACCTCAAGGGTGATGGT 8898 Query 45304 CTTGCCCGTCAGAGTCTTCACAAAGATTTGCAT 45336 ||||| ||||| |||||||||||||| ||||| Sbjct 8899 CTTGCTAGTCAGGGTCTTCACAAAGATCTGCAT 8931 >seq97981 Length=9611 Score = 98.7 bits (108), Expect = 8e-16 Identities = 147/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187 ||||| ||||| ||| ||| ||||||||||||||||| || ||| || ||| Sbjct 2487 ACCAACTGCAGGGTGGACTCTTTCTGAATGTTGTAGTCTGAAAGAGTATAATCATCTTCC 2546 Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247 || ||||| || || || | || ||||| ||||| | ||| | ||||||||||| Sbjct 2547 AGCTGTTTGCCTGCAAAAACCAGACGCTGCTGGTCAGAAGGGATGCCCTCCTTGTCTTGG 2606 Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307 ||||| || || | | | | |||| | ||| ||||| | ||| || |||||| Sbjct 2607 ATTTTAGCTTTGACAATCTCAATGGTGTCACTGGGCTCAACCTCGAGGGTGATGGTCTTG 2666 Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCAT 45336 || ||||| ||||| ||||||| ||||| Sbjct 2667 CCAGTCAGGGTCTTTGCAAAGATCTGCAT 2695 >seq85393 Length=7687 Score = 91.5 bits (100), Expect = 1e-13 Identities = 146/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 45127 TACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTC 45186 |||||||||||| ||| ||| |||||| |||| ||||| || ||| | || || Sbjct 5671 TACCAAGTGCAGAGTGGACTCTTTCTGAGTGTTTTAGTCCGAGAGAGTGCGGCCATCTTC 5612 Query 45187 CAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGC 45246 ||| ||||| || || || |||| ||||| ||||| || || | ||||||||||| Sbjct 5611 CAGCTGTTTGCCTGCAAAAATCAGTCGCTGCTGGTCAGGCGGGATGCCCTCCTTGTCTTA 5552 Query 45247 AATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTT 45306 ||||| || || | | | |||| | ||| ||||| | | || |||| Sbjct 5551 GATTTTACCTTTGACGTTCTCAGTGGTGTCACTGGGCTCAACCTCAAGCATGATGATCTT 5492 Query 45307 GCCCGTCAGAGTCTTCACAAAGATTTGCAT 45336 ||| ||||| | |||||||||||| ||||| Sbjct 5491 GCCAGTCAGGGCCTTCACAAAGATCTGCAT 5462 >seq110331 Length=4397 Score = 89.7 bits (98), Expect = 4e-13 Identities = 131/184 (71%), Gaps = 6/184 (3%) Strand=Plus/Plus Query 45147 CCTTCTGAATGTTGTAGTCGTTCAG---TTGGCGATCGTCGTCCAGTTGTTTTCCGGCGA 45203 ||||||| |||||||||||| || | ||| ||| ||| || || || || |||| Sbjct 1806 CCTTCTGGATGTTGTAGTCGGAGAGAGTTCGGCCATCCTCG---AGCTGCTTACCAGCGA 1862 Query 45204 ATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTTTTGCTTAACCG 45263 | |||| ||||||||||| || || | |||||||||||| || || ||| || Sbjct 1863 AGATCAGTCGCTGTTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGGACTTGACAT 1922 Query 45264 CCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCA 45323 | | | ||||| ||| ||||| | ||| || |||||||||||||| ||||||| Sbjct 1923 TGTCGATGGTGTCCGAGGACTCGACCTCGAGGGTGATGGTCTTGCCCGTCAGGGTCTTCA 1982 Query 45324 CAAA 45327 | || Sbjct 1983 CGAA 1986 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 394221017910421