Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pteronotus_20parnellii_20[genbank_20GCA_5F000465405.1_202013-09-13] 177,401 sequences; 1,960,317,893 total letters Query= NC_003027.1 Length=150773 Score E Sequences producing significant alignments: (Bits) Value seq6383 199 4e-46 seq41434 136 4e-27 seq39192 129 6e-25 seq32390 107 2e-18 seq121209 105 6e-18 >seq6383 Length=23588 Score = 199 bits (220), Expect = 4e-46 Identities = 565/858 (66%), Gaps = 14/858 (2%) Strand=Plus/Plus Query 13898 GAAATAACGCCCATTTTTTGATATTCACTAACTCTTTTTTCAAAGAAGTTAGTTTTACCT 13957 || || || ||||| | |||| || | ||| | || ||||||||||| || || ||| Sbjct 7234 GACATCACCCCCATCCTCTGATTCTCGCCTACTTTCTTCTCAAAGAAGTTGGTCTTCCCT 7293 Query 13958 TCCAGTGATATATTTTCCATAAAATCAAATGGATTTGTTGACAT--AAACACTTTATCAC 14015 || ||||| || || ||||| || ||||| || ||| | || ||| ||| | | Sbjct 7294 TCTAGTGAGATGTTCTCCATGAAGTCAAACGGGTTT-TCCACTCGGAAAGCCTTGCTAA- 7351 Query 14016 AACCTAGTTCTAATAGTAATCTATCCGCAATGAACTCAATATATTGAGACATTAAATCAC 14075 |||| || || | || | || || || | || ||||| || || ||| ||| || Sbjct 7352 AACCCAGCTCCAGCAGGAGCCTGTCGGCCACAAATTCAATGTACTGTTTCATCAAAGTAC 7411 Query 14076 AATTCATACCTATTAGTTTTACAGGAATTATATTGGTTAAAAATTCTTTTTCTATAGACA 14135 ||||||| || || || || || || | | || | || || | |||||| | Sbjct 7412 AATTCATCCCAATGAGCTTCACTGGCAAGGCCTCCGTGAGGAACTCCTGTTCTATCTTAA 7471 Query 14136 CAGCCTCGTTTATAATAATCGTAATAATTTCA--TTAGAAGGAGGATATTTTAGATGTTT 14193 || | | | || || | | || |||| | ||||| | | || ||||| Sbjct 7472 ATGCATTGATGATGATTTCCTT--TACTTTCTGCTCCGAAGGTTTGTGTGCCAGGTGTTT 7529 Query 14194 AAAAATTAAACACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGA 14253 || || | || ||||| ||||| || | |||||||||||| |||||||| ||| | || Sbjct 7530 GAACATCAGGCAGGCAAAGTCACAGTGCAAGCCCTCATCTCTGCTAATAAGCTCGCTGGA 7589 Query 14254 AAATGTTAATCCTGGCATCAATCCTCGtttttttAACCAAAATATTGCAGCGAATGATCC 14313 ||||| | || ||||||| ||||| || || | ||| ||||| | | ||| || || Sbjct 7590 GAATGTGAGGCCGGGCATCAGCCCTCGCTTCTTGAGCCAGAATATCGATGTGAAAGACCC 7649 Query 14314 GGAAAAGAATATTCCCTCAACTGCAGCAAACGCTATTAATCGTTCTCCAAACGATGCTTT 14373 || ||||| ||||| || || |||||||||| | | || |||||| | | || | Sbjct 7650 AGAGAAGAAGATTCCTTCCACCTCAGCAAACGCCACCACGCGCTCTCCATAGGTGGCCTC 7709 Query 14374 TTTGTTCGATATCCATTTTCTAGCCCATTCAGAtttttttttAATAAAATCCATTGTTTC 14433 ||||| | ||||| ||||| || | || || || | | || ||| | || Sbjct 7710 TTTGTCCCCAATCCAACGCAAGGCCCAGTCTGCCTTCTTCTTGACACAAGGCATCTTCTC 7769 Query 14434 AATAGCATTAAATAAATGTTCCTTCTCTTT--AGTACTTGAAATGTATGTATCAATAAGT 14491 || ||||| || | ||| ||||||| || ||| ||||| || || || || Sbjct 7770 GATGGCATTGAAGAGGAACTCCCTCTCTTTGGGGTCTTTG--ATGTAAGTGTCGATGAGG 7827 Query 14492 AAGCTATACATTTCAGAGTGTATGTTTTCCATAGCTATCTGAAAACCATAAAAACATCTA 14551 | ||| ||||| ||||| |||||||||||||| || ||||| || ||||| || || | Sbjct 7828 AGGCTGTACATCTCAGAATGTATGTTTTCCATGGCGATCTGGAAGCCATAGAAGCAGCGG 7887 Query 14552 GCTTCTGACCATTGTACCTCTGAGTAAAATCTTTCGGCCAAATTTTCATTAACTATACCA 14611 ||||||| || || || | || | || |||| |||||||| || || ||| Sbjct 7888 GCTTCTGTGATCTGAACTTCCTGGCTGAACCGCTCCACCAAGTTTTCATTCACGATGCCA 7947 Query 14612 TCACTAGCTGCAAAAAATGCCAATATGTTTTTAATAAAGTATTGCTCTTCATTGCTGAGT 14671 || || |||||||| || |||| | || ||| ||||| ||| || | | || Sbjct 7948 TCGCTGGCTGCAAAGAACGCCAGGACGTGCGAAATGAAGTACCTCTCGTCGTCCTTCAGG 8007 Query 14672 TTTTTCCAAT-CGGCTAAATCCTTAGAAAGATCTACTTCATCAACTGTCCAAAAACTAGC 14730 | | ||| | | || | ||||| ||||| || || || || ||||||| || ||| Sbjct 8008 GTCTCCCAGTGCAGC-AGGTCCTTGGAAAGGTCCACCTCCTCCGCTGTCCAGAAGGAAGC 8066 Query 14731 AACAGCTTTTTTATACAT 14748 | || || || ||||| Sbjct 8067 CTCGGCCTTCTTGTACAT 8084 >seq41434 Length=11022 Score = 136 bits (150), Expect = 4e-27 Identities = 479/735 (65%), Gaps = 16/735 (2%) Strand=Plus/Minus Query 13907 CCCATTTTTTGATATTCACTAACTCTTTTTTCAAAGAAGTTAGTTTTACCTTCCAGTGAT 13966 ||||| | |||||||| | | ||||| ||||||||||| || || || |||||||| Sbjct 7889 CCCATCCTCTGATATTCGCCTTCGCTTTTCTCAAAGAAGTTGGTCTTCCCCTCCAGTGAA 7830 Query 13967 ATATTTTCCATAAAATCAAATGGATTTGTTGACAT--AAACACTTTATCACAACCTAGTT 14024 ||||| ||||| || ||||| | ||| | || | ||| ||| | | |||| | | Sbjct 7829 ATATTCTCCATGAAGTCAAACCGGTTT-TCAACTTGGAAAGCCTTGCTAA-AACCCAACT 7772 Query 14025 CTAATAGTAATCTATCCGCAATGAACTCAATATATTGAGACATTAAATCACAATTCATAC 14084 | | || | || || || ||||| | ||| || || ||| ||| |||||||| | Sbjct 7771 CCAGCAGGAGCCTGTCAGCCATGAATTGAATGTACTGCTTCATCAAAGTGCAATTCATGC 7712 Query 14085 CTATTAGTTTTACAGGAATTATATTGGTTAAAAATTCTTTTTCTATAGACACAGCCTCGT 14144 | || || || || || | | ||| | || || | |||||| | | || | | Sbjct 7711 CAATGAGCTTCACTGGCAAGGCCTCGGTGAGGAACTCCTCTTCTAT---CCTAACCGCAT 7655 Query 14145 TTATAATAATCGTAATAATT---TCATTAGAAGGAGGATATTTTAGATGTTTAAAAATTA 14201 | ||||| || | | | | | | ||||| || || ||||| || || | Sbjct 7654 TAATAATTATTTCATTTACTCTCTGCTCTGAAGGTTTGTACAACAGGTGTTTGAACATCA 7595 Query 14202 AACACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTA 14261 || ||||| || || ||| |||||||||||| |||||||| ||| | || ||||| | Sbjct 7594 GGCAGGCAAAGTCCCAGTGATAGCCCTCATCTCTGCTAATAAGCTCGCTGGAGAATGTGA 7535 Query 14262 ATCCTGGCATCAATCCTCGtttttttAACCAAAATATTGCAGCGAATGATCCGGAAAAGA 14321 || ||||||| ||||| || | | ||| ||||||| | ||| || || ||||||| Sbjct 7534 GACCAGGCATCAGCCCTCGCTTCCTGAGCCAGAATATTGATGTGAAAGACCCAGAAAAGA 7475 Query 14322 ATATTCCCTCAACTGCAGCAAACGCTATTAATCGTTCTCCAAACGATGCTTTTTTGTTCG 14381 | |||| | || ||||||| || | | | |||||| | | | | ||||| | Sbjct 7474 AGGTTCCTTGCACCTCAGCAAAGGCCACCACATGCTCTCCACAGGTGGTCTCTTTGTCCC 7415 Query 14382 ATATCCATTTTCTAGCCCATTCAGAtttttttttAATAAAATCCAT-TGTTTCAATAGCA 14440 ||||| ||||| | || || || | | || ||| |||| || ||| Sbjct 7414 CGATCCAGCGCAAGGCCCAGTATACCTTCTTCTTGACACAAGGCATCAGTTTGAA-GGCA 7356 Query 14441 TTAAATA-AATGTTCCTTCTCTTTAGTACTTGAAATGTATGTATCAATAAGTAAGCTATA 14499 || || | | | |||| ||| | ||| || || || | | || | ||| || Sbjct 7355 TTGAAGAGGAACTCCCTTTCCTTGTGATCTT-TGATATAAGTGTTGAGGAGGAGGCTGTA 7297 Query 14500 CATTTCAGAGTGTATGTTTTCCATAGCTATCTGAAAACCATAAAAACATCTAGCTTCTGA 14559 ||| ||||| ||||| |||||||| || ||||| || || || || || | ||||||| Sbjct 7296 CATCTCAGAATGTATATTTTCCATGGCAATCTGGAAGCCGTAGAAGCAGCAGGCTTCTGT 7237 Query 14560 CCATTGTACCT-CTGAGTAAAATCTTTCGGCCAAATTTTCATTAACTATACCATCACTAG 14618 || || | ||| || | | || |||| |||||||| || || |||| ||| | Sbjct 7236 GATCTGAACTTGCTGGCTATACT-GCTCCACCAAGTTTTCATTCACAATGCCATTACTTG 7178 Query 14619 CTGCAAAAAATGCCA 14633 || |||| ||| ||| Sbjct 7177 CTACAAAGAATCCCA 7163 >seq39192 Length=20454 Score = 129 bits (142), Expect = 6e-25 Identities = 359/542 (66%), Gaps = 9/542 (2%) Strand=Plus/Minus Query 14186 AGATGTTTAAAAATTAAACACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGT 14245 || ||||| || || | || ||||| ||||| || | ||||||||||| ||||||| Sbjct 14314 AGGTGTTTGAACATCAGGCAGGCAAAGTCACAGTGCAA-CCCTCATCTCTGTTAATAAGC 14256 Query 14246 TCGTTTGAAAATGTTAATCCTGGCATCAATCCTCGtttttttAACCAAAATATTGCAGCG 14305 || || || ||||| | || ||||||| ||||| || || | || ||||| | | Sbjct 14255 TCATTGGAGAATGTGAGGCCAGGCATCAGCCCTCGCTTCTTGAGCCCGAATATCAATGTG 14196 Query 14306 AATGATCCGGAAAAGAATATTCCCTCAACTGCAGCAAACGCTATTAATCGTTCTCCAAAC 14365 | || || |||||||| ||||| || | |||||||| | | | || |||||| | Sbjct 14195 GAAGACCCAGAAAAGAAGATTCCTTCCATGGCAGCAAAGGTCACCACACGATCTCCATAG 14136 Query 14366 GATGCTTTTTTGTTCGATATCCATTTTCTAGCCCATTCAGAtttttttttAATAAAATCC 14425 | || | ||||| | ||||| || || || | | || || | | || | Sbjct 14135 GGGGCCTCTTTGTCCCCAATCCAACGCAAGGCTCAGTC---TGTCTTCTTGACACAAGGC 14079 Query 14426 ATTGTTTCAATAGCATTAAATAAATGTTCCTTC-TCTT-TAGTACTTGAAATGTATGTAT 14483 || ||||||| | || || | ||| || |||| || |||| |||||| || | Sbjct 14078 ATCATTTCAATGACGTTGAAGAGGCACTCCCTCTTCTTGGGGTCCTTG-AATGTAAGTGT 14020 Query 14484 CAATAAGTAAGCTATACATTTCAGAGTGTATGTTTTCCATAGCTATCTGAAAACCATAAA 14543 | || || |||||||||| ||||| |||||||||||||| || | ||| || || || | Sbjct 14019 CTATGAGGAAGCTATACACCTCAGAATGTATGTTTTCCATGGCAACCTGGAAGCCGTAGA 13960 Query 14544 AACATCTAGCTTCTGACCATTGTACCTCTGAGTAAAATCTTTCGGCCAAATTTTCATTAA 14603 | || | |||| || || || || | ||| | || |||| ||| |||| | Sbjct 13959 AGCAGCAGGCTTTTGTGATCTGAACTTCCTGGCTAAACCGCTCCACCAAGTTTGCATTCA 13900 Query 14604 CTATACCATCACTAGCTGCAAAAAATGCCAATATGTTTTTAATAAAGTATTGCTCTTCAT 14663 || |||||||| ||||||| || |||| | || ||| ||||| || || | Sbjct 13899 TGATGCCATCACTCACTGCAAAGAACGCCAGGACGTGGGAAATGAAGTACCTCTTGTCGT 13840 Query 14664 TGCTGAGTTTTTTCCAAT-CGGCTAAATCCTTAGAAAGATCTACTTCATCAACTGTCCAA 14722 | | | | ||| | | || | | ||| ||||| ||||| || ||| |||||||| Sbjct 13839 GCTTCATGGTCTCCCAGTGCAGC-AGGTTCTTGGAAAGGTCTACCTCCTCAGCTGTCCAA 13781 Query 14723 AA 14724 || Sbjct 13780 AA 13779 >seq32390 Length=18494 Score = 107 bits (118), Expect = 2e-18 Identities = 95/119 (80%), Gaps = 0/119 (0%) Strand=Plus/Minus Query 14228 TCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCTGGCATCAATCCTCGttttttt 14287 |||||||| || || ||||| || ||||| || | ||| ||||| | |||| ||| ||| Sbjct 1993 TCATCTCTGCTGATGAGTTCATTGGAAAAGGTGAGTCCAGGCATAAGACCTCTTTTCTTT 1934 Query 14288 AACCAAAATATTGCAGCGAATGATCCGGAAAAGAATATTCCCTCAACTGCAGCAAACGC 14346 ||||| ||||||||||| || ||||| || ||||| ||||| || || |||||||| || Sbjct 1933 AACCAGAATATTGCAGCAAAAGATCCCGAGAAGAAAATTCCTTCTACAGCAGCAAAGGC 1875 >seq121209 Length=2218 Score = 105 bits (116), Expect = 6e-18 Identities = 96/121 (79%), Gaps = 0/121 (0%) Strand=Plus/Plus Query 14226 CCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCTGGCATCAATCCTCGttttt 14285 |||||||||| |||||||| ||||| || ||||| | || ||||||| ||||| |||| Sbjct 1711 CCTCATCTCTGCTAATAAGCTCGTTGGAGAATGTGAGGCCGGGCATCAGCCCTCGCTTTT 1770 Query 14286 ttAACCAAAATATTGCAGCGAATGATCCGGAAAAGAATATTCCCTCAACTGCAGCAAACG 14345 | | ||| ||||| | ||||| || || || ||||| ||||| || || |||||||||| Sbjct 1771 TGAGCCAGAATATCGATGCGAAAGACCCAGAGAAGAAGATTCCTTCCACCGCAGCAAACG 1830 Query 14346 C 14346 | Sbjct 1831 C 1831 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 481275992602680