Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pteronotus_20parnellii_20[genbank_20GCA_5F000465405.1_202013-09-13]
177,401 sequences; 1,960,317,893 total letters
Query= NC_003027.1
Length=150773
Score E
Sequences producing significant alignments: (Bits) Value
seq6383 199 4e-46
seq41434 136 4e-27
seq39192 129 6e-25
seq32390 107 2e-18
seq121209 105 6e-18
>seq6383
Length=23588
Score = 199 bits (220), Expect = 4e-46
Identities = 565/858 (66%), Gaps = 14/858 (2%)
Strand=Plus/Plus
Query 13898 GAAATAACGCCCATTTTTTGATATTCACTAACTCTTTTTTCAAAGAAGTTAGTTTTACCT 13957
|| || || ||||| | |||| || | ||| | || ||||||||||| || || |||
Sbjct 7234 GACATCACCCCCATCCTCTGATTCTCGCCTACTTTCTTCTCAAAGAAGTTGGTCTTCCCT 7293
Query 13958 TCCAGTGATATATTTTCCATAAAATCAAATGGATTTGTTGACAT--AAACACTTTATCAC 14015
|| ||||| || || ||||| || ||||| || ||| | || ||| ||| | |
Sbjct 7294 TCTAGTGAGATGTTCTCCATGAAGTCAAACGGGTTT-TCCACTCGGAAAGCCTTGCTAA- 7351
Query 14016 AACCTAGTTCTAATAGTAATCTATCCGCAATGAACTCAATATATTGAGACATTAAATCAC 14075
|||| || || | || | || || || | || ||||| || || ||| ||| ||
Sbjct 7352 AACCCAGCTCCAGCAGGAGCCTGTCGGCCACAAATTCAATGTACTGTTTCATCAAAGTAC 7411
Query 14076 AATTCATACCTATTAGTTTTACAGGAATTATATTGGTTAAAAATTCTTTTTCTATAGACA 14135
||||||| || || || || || || | | || | || || | |||||| |
Sbjct 7412 AATTCATCCCAATGAGCTTCACTGGCAAGGCCTCCGTGAGGAACTCCTGTTCTATCTTAA 7471
Query 14136 CAGCCTCGTTTATAATAATCGTAATAATTTCA--TTAGAAGGAGGATATTTTAGATGTTT 14193
|| | | | || || | | || |||| | ||||| | | || |||||
Sbjct 7472 ATGCATTGATGATGATTTCCTT--TACTTTCTGCTCCGAAGGTTTGTGTGCCAGGTGTTT 7529
Query 14194 AAAAATTAAACACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGA 14253
|| || | || ||||| ||||| || | |||||||||||| |||||||| ||| | ||
Sbjct 7530 GAACATCAGGCAGGCAAAGTCACAGTGCAAGCCCTCATCTCTGCTAATAAGCTCGCTGGA 7589
Query 14254 AAATGTTAATCCTGGCATCAATCCTCGtttttttAACCAAAATATTGCAGCGAATGATCC 14313
||||| | || ||||||| ||||| || || | ||| ||||| | | ||| || ||
Sbjct 7590 GAATGTGAGGCCGGGCATCAGCCCTCGCTTCTTGAGCCAGAATATCGATGTGAAAGACCC 7649
Query 14314 GGAAAAGAATATTCCCTCAACTGCAGCAAACGCTATTAATCGTTCTCCAAACGATGCTTT 14373
|| ||||| ||||| || || |||||||||| | | || |||||| | | || |
Sbjct 7650 AGAGAAGAAGATTCCTTCCACCTCAGCAAACGCCACCACGCGCTCTCCATAGGTGGCCTC 7709
Query 14374 TTTGTTCGATATCCATTTTCTAGCCCATTCAGAtttttttttAATAAAATCCATTGTTTC 14433
||||| | ||||| ||||| || | || || || | | || ||| | ||
Sbjct 7710 TTTGTCCCCAATCCAACGCAAGGCCCAGTCTGCCTTCTTCTTGACACAAGGCATCTTCTC 7769
Query 14434 AATAGCATTAAATAAATGTTCCTTCTCTTT--AGTACTTGAAATGTATGTATCAATAAGT 14491
|| ||||| || | ||| ||||||| || ||| ||||| || || || ||
Sbjct 7770 GATGGCATTGAAGAGGAACTCCCTCTCTTTGGGGTCTTTG--ATGTAAGTGTCGATGAGG 7827
Query 14492 AAGCTATACATTTCAGAGTGTATGTTTTCCATAGCTATCTGAAAACCATAAAAACATCTA 14551
| ||| ||||| ||||| |||||||||||||| || ||||| || ||||| || || |
Sbjct 7828 AGGCTGTACATCTCAGAATGTATGTTTTCCATGGCGATCTGGAAGCCATAGAAGCAGCGG 7887
Query 14552 GCTTCTGACCATTGTACCTCTGAGTAAAATCTTTCGGCCAAATTTTCATTAACTATACCA 14611
||||||| || || || | || | || |||| |||||||| || || |||
Sbjct 7888 GCTTCTGTGATCTGAACTTCCTGGCTGAACCGCTCCACCAAGTTTTCATTCACGATGCCA 7947
Query 14612 TCACTAGCTGCAAAAAATGCCAATATGTTTTTAATAAAGTATTGCTCTTCATTGCTGAGT 14671
|| || |||||||| || |||| | || ||| ||||| ||| || | | ||
Sbjct 7948 TCGCTGGCTGCAAAGAACGCCAGGACGTGCGAAATGAAGTACCTCTCGTCGTCCTTCAGG 8007
Query 14672 TTTTTCCAAT-CGGCTAAATCCTTAGAAAGATCTACTTCATCAACTGTCCAAAAACTAGC 14730
| | ||| | | || | ||||| ||||| || || || || ||||||| || |||
Sbjct 8008 GTCTCCCAGTGCAGC-AGGTCCTTGGAAAGGTCCACCTCCTCCGCTGTCCAGAAGGAAGC 8066
Query 14731 AACAGCTTTTTTATACAT 14748
| || || || |||||
Sbjct 8067 CTCGGCCTTCTTGTACAT 8084
>seq41434
Length=11022
Score = 136 bits (150), Expect = 4e-27
Identities = 479/735 (65%), Gaps = 16/735 (2%)
Strand=Plus/Minus
Query 13907 CCCATTTTTTGATATTCACTAACTCTTTTTTCAAAGAAGTTAGTTTTACCTTCCAGTGAT 13966
||||| | |||||||| | | ||||| ||||||||||| || || || ||||||||
Sbjct 7889 CCCATCCTCTGATATTCGCCTTCGCTTTTCTCAAAGAAGTTGGTCTTCCCCTCCAGTGAA 7830
Query 13967 ATATTTTCCATAAAATCAAATGGATTTGTTGACAT--AAACACTTTATCACAACCTAGTT 14024
||||| ||||| || ||||| | ||| | || | ||| ||| | | |||| | |
Sbjct 7829 ATATTCTCCATGAAGTCAAACCGGTTT-TCAACTTGGAAAGCCTTGCTAA-AACCCAACT 7772
Query 14025 CTAATAGTAATCTATCCGCAATGAACTCAATATATTGAGACATTAAATCACAATTCATAC 14084
| | || | || || || ||||| | ||| || || ||| ||| |||||||| |
Sbjct 7771 CCAGCAGGAGCCTGTCAGCCATGAATTGAATGTACTGCTTCATCAAAGTGCAATTCATGC 7712
Query 14085 CTATTAGTTTTACAGGAATTATATTGGTTAAAAATTCTTTTTCTATAGACACAGCCTCGT 14144
| || || || || || | | ||| | || || | |||||| | | || | |
Sbjct 7711 CAATGAGCTTCACTGGCAAGGCCTCGGTGAGGAACTCCTCTTCTAT---CCTAACCGCAT 7655
Query 14145 TTATAATAATCGTAATAATT---TCATTAGAAGGAGGATATTTTAGATGTTTAAAAATTA 14201
| ||||| || | | | | | | ||||| || || ||||| || || |
Sbjct 7654 TAATAATTATTTCATTTACTCTCTGCTCTGAAGGTTTGTACAACAGGTGTTTGAACATCA 7595
Query 14202 AACACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTA 14261
|| ||||| || || ||| |||||||||||| |||||||| ||| | || ||||| |
Sbjct 7594 GGCAGGCAAAGTCCCAGTGATAGCCCTCATCTCTGCTAATAAGCTCGCTGGAGAATGTGA 7535
Query 14262 ATCCTGGCATCAATCCTCGtttttttAACCAAAATATTGCAGCGAATGATCCGGAAAAGA 14321
|| ||||||| ||||| || | | ||| ||||||| | ||| || || |||||||
Sbjct 7534 GACCAGGCATCAGCCCTCGCTTCCTGAGCCAGAATATTGATGTGAAAGACCCAGAAAAGA 7475
Query 14322 ATATTCCCTCAACTGCAGCAAACGCTATTAATCGTTCTCCAAACGATGCTTTTTTGTTCG 14381
| |||| | || ||||||| || | | | |||||| | | | | ||||| |
Sbjct 7474 AGGTTCCTTGCACCTCAGCAAAGGCCACCACATGCTCTCCACAGGTGGTCTCTTTGTCCC 7415
Query 14382 ATATCCATTTTCTAGCCCATTCAGAtttttttttAATAAAATCCAT-TGTTTCAATAGCA 14440
||||| ||||| | || || || | | || ||| |||| || |||
Sbjct 7414 CGATCCAGCGCAAGGCCCAGTATACCTTCTTCTTGACACAAGGCATCAGTTTGAA-GGCA 7356
Query 14441 TTAAATA-AATGTTCCTTCTCTTTAGTACTTGAAATGTATGTATCAATAAGTAAGCTATA 14499
|| || | | | |||| ||| | ||| || || || | | || | ||| ||
Sbjct 7355 TTGAAGAGGAACTCCCTTTCCTTGTGATCTT-TGATATAAGTGTTGAGGAGGAGGCTGTA 7297
Query 14500 CATTTCAGAGTGTATGTTTTCCATAGCTATCTGAAAACCATAAAAACATCTAGCTTCTGA 14559
||| ||||| ||||| |||||||| || ||||| || || || || || | |||||||
Sbjct 7296 CATCTCAGAATGTATATTTTCCATGGCAATCTGGAAGCCGTAGAAGCAGCAGGCTTCTGT 7237
Query 14560 CCATTGTACCT-CTGAGTAAAATCTTTCGGCCAAATTTTCATTAACTATACCATCACTAG 14618
|| || | ||| || | | || |||| |||||||| || || |||| ||| |
Sbjct 7236 GATCTGAACTTGCTGGCTATACT-GCTCCACCAAGTTTTCATTCACAATGCCATTACTTG 7178
Query 14619 CTGCAAAAAATGCCA 14633
|| |||| ||| |||
Sbjct 7177 CTACAAAGAATCCCA 7163
>seq39192
Length=20454
Score = 129 bits (142), Expect = 6e-25
Identities = 359/542 (66%), Gaps = 9/542 (2%)
Strand=Plus/Minus
Query 14186 AGATGTTTAAAAATTAAACACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGT 14245
|| ||||| || || | || ||||| ||||| || | ||||||||||| |||||||
Sbjct 14314 AGGTGTTTGAACATCAGGCAGGCAAAGTCACAGTGCAA-CCCTCATCTCTGTTAATAAGC 14256
Query 14246 TCGTTTGAAAATGTTAATCCTGGCATCAATCCTCGtttttttAACCAAAATATTGCAGCG 14305
|| || || ||||| | || ||||||| ||||| || || | || ||||| | |
Sbjct 14255 TCATTGGAGAATGTGAGGCCAGGCATCAGCCCTCGCTTCTTGAGCCCGAATATCAATGTG 14196
Query 14306 AATGATCCGGAAAAGAATATTCCCTCAACTGCAGCAAACGCTATTAATCGTTCTCCAAAC 14365
| || || |||||||| ||||| || | |||||||| | | | || |||||| |
Sbjct 14195 GAAGACCCAGAAAAGAAGATTCCTTCCATGGCAGCAAAGGTCACCACACGATCTCCATAG 14136
Query 14366 GATGCTTTTTTGTTCGATATCCATTTTCTAGCCCATTCAGAtttttttttAATAAAATCC 14425
| || | ||||| | ||||| || || || | | || || | | || |
Sbjct 14135 GGGGCCTCTTTGTCCCCAATCCAACGCAAGGCTCAGTC---TGTCTTCTTGACACAAGGC 14079
Query 14426 ATTGTTTCAATAGCATTAAATAAATGTTCCTTC-TCTT-TAGTACTTGAAATGTATGTAT 14483
|| ||||||| | || || | ||| || |||| || |||| |||||| || |
Sbjct 14078 ATCATTTCAATGACGTTGAAGAGGCACTCCCTCTTCTTGGGGTCCTTG-AATGTAAGTGT 14020
Query 14484 CAATAAGTAAGCTATACATTTCAGAGTGTATGTTTTCCATAGCTATCTGAAAACCATAAA 14543
| || || |||||||||| ||||| |||||||||||||| || | ||| || || || |
Sbjct 14019 CTATGAGGAAGCTATACACCTCAGAATGTATGTTTTCCATGGCAACCTGGAAGCCGTAGA 13960
Query 14544 AACATCTAGCTTCTGACCATTGTACCTCTGAGTAAAATCTTTCGGCCAAATTTTCATTAA 14603
| || | |||| || || || || | ||| | || |||| ||| |||| |
Sbjct 13959 AGCAGCAGGCTTTTGTGATCTGAACTTCCTGGCTAAACCGCTCCACCAAGTTTGCATTCA 13900
Query 14604 CTATACCATCACTAGCTGCAAAAAATGCCAATATGTTTTTAATAAAGTATTGCTCTTCAT 14663
|| |||||||| ||||||| || |||| | || ||| ||||| || || |
Sbjct 13899 TGATGCCATCACTCACTGCAAAGAACGCCAGGACGTGGGAAATGAAGTACCTCTTGTCGT 13840
Query 14664 TGCTGAGTTTTTTCCAAT-CGGCTAAATCCTTAGAAAGATCTACTTCATCAACTGTCCAA 14722
| | | | ||| | | || | | ||| ||||| ||||| || ||| ||||||||
Sbjct 13839 GCTTCATGGTCTCCCAGTGCAGC-AGGTTCTTGGAAAGGTCTACCTCCTCAGCTGTCCAA 13781
Query 14723 AA 14724
||
Sbjct 13780 AA 13779
>seq32390
Length=18494
Score = 107 bits (118), Expect = 2e-18
Identities = 95/119 (80%), Gaps = 0/119 (0%)
Strand=Plus/Minus
Query 14228 TCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCTGGCATCAATCCTCGttttttt 14287
|||||||| || || ||||| || ||||| || | ||| ||||| | |||| ||| |||
Sbjct 1993 TCATCTCTGCTGATGAGTTCATTGGAAAAGGTGAGTCCAGGCATAAGACCTCTTTTCTTT 1934
Query 14288 AACCAAAATATTGCAGCGAATGATCCGGAAAAGAATATTCCCTCAACTGCAGCAAACGC 14346
||||| ||||||||||| || ||||| || ||||| ||||| || || |||||||| ||
Sbjct 1933 AACCAGAATATTGCAGCAAAAGATCCCGAGAAGAAAATTCCTTCTACAGCAGCAAAGGC 1875
>seq121209
Length=2218
Score = 105 bits (116), Expect = 6e-18
Identities = 96/121 (79%), Gaps = 0/121 (0%)
Strand=Plus/Plus
Query 14226 CCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCTGGCATCAATCCTCGttttt 14285
|||||||||| |||||||| ||||| || ||||| | || ||||||| ||||| ||||
Sbjct 1711 CCTCATCTCTGCTAATAAGCTCGTTGGAGAATGTGAGGCCGGGCATCAGCCCTCGCTTTT 1770
Query 14286 ttAACCAAAATATTGCAGCGAATGATCCGGAAAAGAATATTCCCTCAACTGCAGCAAACG 14345
| | ||| ||||| | ||||| || || || ||||| ||||| || || ||||||||||
Sbjct 1771 TGAGCCAGAATATCGATGCGAAAGACCCAGAGAAGAAGATTCCTTCCACCGCAGCAAACG 1830
Query 14346 C 14346
|
Sbjct 1831 C 1831
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 481275992602680
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