Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pteronotus_20parnellii_20[genbank_20GCA_5F000465405.1_202013-09-13]
177,401 sequences; 1,960,317,893 total letters
Query= NC_003083.1
Length=118584
Score E
Sequences producing significant alignments: (Bits) Value
seq161317 107 1e-18
seq548 96.9 3e-15
seq174782 91.5 1e-13
seq79216 89.7 4e-13
seq104553 82.4 6e-11
>seq161317
Length=2104
Score = 107 bits (118), Expect = 1e-18
Identities = 162/228 (71%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 18099 CCTCCCCGTAGTCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCC 18158
|| || || |||| || || | |||||| ||||| || || |||||||||||||||
Sbjct 1078 CCACCGCGAAGTCGGAGAACGAGGTGAAGAGTTGACTCCTTCTGAATGTTGTAGTCGCTT 1137
Query 18159 ATTGTTTTACAATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGC 18218
| || || ||||||||| || || || || ||||||| | |||||||| |||
Sbjct 1138 AAGGTGCGACCATCTTCCAACTGCTTACCAGCGAAGATAAGACGCTGTTGATCAGGGGGA 1197
Query 18219 ACGCCTTCCTTATCGGCAAT-TTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGT 18277
| || ||||| || ||| ||| | ||| || | | | |||||||| || ||||
Sbjct 1198 ATACCCTCCTTGTCCTGAATCTTGCT-CTTCACGTTGTCGATAGTGTCACTGGACTCGAC 1256
Query 18278 TTCAATGGTGATGCTTTTGCCGGTCAATGTTTTTACAAAAATTTGCAT 18325
|||| ||||||| | || ||||| | || || |||||||| |||||
Sbjct 1257 CTCAAGGGTGATGGTCTTTCCGGTGAGAGTCTTCACAAAAATCTGCAT 1304
>seq548
Length=19863
Score = 96.9 bits (106), Expect = 3e-15
Identities = 158/225 (70%), Gaps = 2/225 (1%)
Strand=Plus/Minus
Query 18102 CCCCGTAGTCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATT 18161
|||| || | ||| |||| ||| || || || ||||| |||||||||||||| | |
Sbjct 10979 CCCCACAGACGAAGCACCAAGTGCAGGGTGGACTCTTTCTGAATGTTGTAGTCCGAGAGA 10920
Query 18162 GTTTTACAATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACG 18221
|| | ||| |||| ||||||||| || | || |||| || || || || | |
Sbjct 10919 GTGCAGCCATCCTCCAGCTGTTTGCCCACAAACATCAGTCACTGCTGGTCAGGTGGGATG 10860
Query 18222 CCTTCCTTATCGGCAATTTGTTGC-TTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTC 18280
|| ||||| || |||| | || ||||| | ||| ||||||| ||||||| ||
Sbjct 10859 CCCTCCTTGTCTTGGATTT-TAGCTTTGACATTCTCAATGGTGTCACTGGGCTCGACCTC 10801
Query 18281 AATGGTGATGCTTTTGCCGGTCAATGTTTTTACAAAAATTTGCAT 18325
|| ||||||| | ||||| |||| || || ||||| || |||||
Sbjct 10800 AAGGGTGATGGTCTTGCCAGTCAGGGTCTTCACAAAGATCTGCAT 10756
>seq174782
Length=7384
Score = 91.5 bits (100), Expect = 1e-13
Identities = 115/157 (73%), Gaps = 2/157 (1%)
Strand=Plus/Plus
Query 18078 AATACATTTTCTTTTTGTTATC--CTCCCCGTAGTCTAAGTACCATGTGAAGTGTTGATT 18135
|| || |||||||||| ||| | | || | ||||| | ||| | ||||| || || |
Sbjct 90 AAGACTTTTTCTTTTTCTTAGCGCCACCACAAAGTCTCAATACAAGATGAAGAGTAGACT 149
Query 18136 CTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCTTCCAATTGTTTGCCCGCATAGA 18195
| ||||||||||||||||| | || || | |||||||| ||| || || ||| |||
Sbjct 150 CCTTTTGAATGTTGTAGTCAGACAAAGTACGTCCATCTTCCAGTTGCTTTCCAGCAAAGA 209
Query 18196 TAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATC 18232
| |||||||| ||||| || | |||||||||||
Sbjct 210 TCAGTCTTTGCTGATCAGGAGGAATTCCTTCCTTATC 246
>seq79216
Length=33065
Score = 89.7 bits (98), Expect = 4e-13
Identities = 151/216 (70%), Gaps = 2/216 (1%)
Strand=Plus/Plus
Query 18114 AGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCT 18173
|| |||| ||| || || || ||||| || ||||||||||| | | || | ||||
Sbjct 3650 AGGACCAGGTGCAGGGTGGACTCTTTCTGGATGTTGTAGTCAGAAAGAGTGCGGCCATCT 3709
Query 18174 TCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATCG 18233
|||| || ||||| ||| |||| || || || || || ||| | ||||||||||||
Sbjct 3710 TCCAGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTCTGGGGGGATGCCTTCCTTATCT 3769
Query 18234 GCAATTTGTTGC-TTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCT 18292
|| | | || || || | ||| ||||| | |||||| || | ||||||| |
Sbjct 3770 TGGATCT-TGGCTTTCACATTCTCAATGGTGTCGCTGGGCTCCACCTCCAGGGTGATGGT 3828
Query 18293 TTTGCCGGTCAATGTTTTTACAAAAATTTGCATTTT 18328
||||| |||| || || ||||| || ||||||||
Sbjct 3829 CTTGCCTGTCAGGGTCTTCACAAAGATCTGCATTTT 3864
>seq104553
Length=43841
Score = 82.4 bits (90), Expect = 6e-11
Identities = 113/157 (72%), Gaps = 2/157 (1%)
Strand=Plus/Plus
Query 18078 AATACATTTTCTTTTTGTTATC--CTCCCCGTAGTCTAAGTACCATGTGAAGTGTTGATT 18135
|| || | ||| |||| ||| | | || || ||||| | || | ||||| || || |
Sbjct 35444 AAGACTTCTTCCTTTTCTTAGCACCACCACGAAGTCTCAACACAAGATGAAGAGTAGACT 35503
Query 18136 CTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCTTCCAATTGTTTGCCCGCATAGA 18195
| ||||||||||||||||| | || || | |||||||| ||| ||||| ||| |||
Sbjct 35504 CCTTTTGAATGTTGTAGTCAGACAAAGTACGCCCATCTTCCAGTTGCTTGCCAGCAAAGA 35563
Query 18196 TAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATC 18232
| ||| |||| ||||| || | |||||||||||
Sbjct 35564 TCAGTTTTTGCTGATCAGGAGGAATTCCTTCCTTATC 35600
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 378523829939745
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |