Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pteronotus_20parnellii_20[genbank_20GCA_5F000465405.1_202013-09-13]
177,401 sequences; 1,960,317,893 total letters
Query= NC_003225.3
Length=309286
Score E
Sequences producing significant alignments: (Bits) Value
seq41434 127 4e-24
seq172910 87.8 4e-12
seq39192 87.8 4e-12
>seq41434
Length=11022
Score = 127 bits (140), Expect = 4e-24
Identities = 295/439 (67%), Gaps = 7/439 (2%)
Strand=Plus/Plus
Query 101918 GTTGCCTTTGCTGCAGTTGAAGGAATCTTCTTTAGTGGTGCATTCGCATCCATTTTCTGG 101977
|| |||||||||| || |||||| ||||||| ||| | ||| |||| || ||||||
Sbjct 7447 GTGGCCTTTGCTGAGGTGCAAGGAACCTTCTTTTCTGGGTCTTTCACATCAATATTCTGG 7506
Query 101978 ATCAAGAACAGGGGTATTTTGCCTGGTCTCACCTCCTCCAATGAGTTCATTTCTAGGGAC 102037
||| ||| | || | ||||||||||||| | ||||| ||| | ||| || ||
Sbjct 7507 CTCAGGAAGCGAGGGCTGATGCCTGGTCTCACATTCTCCAGCGAGCTTATTAGCAGAGAT 7566
Query 102038 GAAGGTCTTCATCGCGACTTTGCATGCATGCTGTTGAAAAAGGGTTTTGTTGATACCCCA 102097
|| || ||| | |||||||| ||| || |||| ||| | | |||| | |||
Sbjct 7567 GAGGGCTATCACTGGGACTTTGCCTGCCTGATGTTCAAACA-CCTGTTGTACAAACC--- 7622
Query 102098 TCAAGAG-AAAGGATTCTTGAAATTGTCACTGAAGCCGTCCGAATTGAACAAGAATTTCT 102156
| |||| | || | |||||| | | | | || || | || ||| | || || ||
Sbjct 7623 TTCAGAGCAGAGAGTAAATGAAATAATTATTAATGCGGTTAGGATAGAAGAGGAGTTCCT 7682
Query 102157 CACAGTTTCCCTGCCTGTTAAATTAGTGGGAATGAACTGCAAGTTGATGAGCCAGTACAT 102216
||| | || |||| || || | | || ||||| |||| ||||||| ||||||||
Sbjct 7683 CACCGAGGCCTTGCCAGTGAAGCTCATTGGCATGAATTGCACTTTGATGAAGCAGTACAT 7742
Query 102217 TGAATTTGTGGCAGATAAACTATTGGTTGAAATGGG-ACTAGAAAAGCACTATAATGTTA 102275
| |||| |||| || | || || | || |||| ||| || || | || |||
Sbjct 7743 TCAATTCATGGCTGACAGGCTCCTGCTGGAGTTGGGTTTTAGCAAGGCTTTCCAA-GTTG 7801
Query 102276 CCAACCCCTTCCCATTCATGGACAATATTTCCCTCGAGAATAAGACCAACTTTTTTGAAA 102335
|||| || |||||||| |||||||| || ||| ||||||||||| ||||| |
Sbjct 7802 AAAACCGGTTTGACTTCATGGAGAATATTTCACTGGAGGGGAAGACCAACTTCTTTGAGA 7861
Query 102336 AGAGAGTCGCCGAGTATCA 102354
| || | | ||| |||||
Sbjct 7862 AAAGCGAAGGCGAATATCA 7880
>seq172910
Length=5564
Score = 87.8 bits (96), Expect = 4e-12
Identities = 172/252 (68%), Gaps = 2/252 (1%)
Strand=Plus/Plus
Query 94792 CCTCCAGCAGTCTTGGAGATGATTGCCGCCTCCTTAAGAGTATCATAAATACCCTCAATG 94851
|| ||||| |||||||||| || || ||| |||||||| || || ||||||||
Sbjct 3553 CCACCAGCCATCTTGGAGATCATGGCACAGGTCTTGAGAGTATCGTAGATTCCCTCAATA 3612
Query 94852 CTATCATCTTGAAGGCCCAGAAGGAAGCACGAGGAAAGTTGGGGTGTGACTGTT-CCACA 94910
|| || || | | | | | |||||| || || | |||||| ||| | | ||
Sbjct 3613 CTGTCGTCCTTCATATCAACCAAGAAGCAAGATGACAATTGGGGC-TGAGGGGTGCCGGC 3671
Query 94911 ATTAAACAGTGTGGGGGAAGCATGGGTAAAATAGTGCCTCGACATGAGATCATATGTTTC 94970
|| || || ||||| |||||||| || || | | || ||||| || | ||||| ||
Sbjct 3672 GTTGAAGAGCGTGGGAGAAGCATGTGTGAAGAATTTGCTGGACATCAGGTTGTATGTCTC 3731
Query 94971 AATGACAGATTTGATGTCTGATCCGTGAATGCCGACAGCCACACGCATAATCATGTCCTG 95030
| ||| | ||| || || ||| || |||| ||||||||| ||||||| |||
Sbjct 3732 CAAGACTCGCTCGATATCATCACCCCAAATACCAACAGACACACGCATGATCATGTGCTG 3791
Query 95031 AGGGCGCTCAAC 95042
||||||||| ||
Sbjct 3792 AGGGCGCTCGAC 3803
>seq39192
Length=20454
Score = 87.8 bits (96), Expect = 4e-12
Identities = 113/155 (73%), Gaps = 1/155 (1%)
Strand=Plus/Plus
Query 101922 CCTTTGCTGCAGTTGAAGGAATCTTCTTTAGTGGTGCATTCGCATCCATTTTCTGGATCA 101981
|||||||||| | ||||||||||||||| ||| | | | ||| || ||| || |||
Sbjct 14156 CCTTTGCTGCCATGGAAGGAATCTTCTTTTCTGGGTCTTCCACATTGATATTCGGGCTCA 14215
Query 101982 AGAACAGGGGTATTTTGCCTGGTCTCACCTCCTCCAATGAGTTCATTTCTAGGGACGAAG 102041
|||| | || | ||||||| ||||| | |||||||||| | ||| || || || |
Sbjct 14216 AGAAGCGAGGGCTGATGCCTGGCCTCACATTCTCCAATGAGCTTATTAACAGAGATGAGG 14275
Query 102042 GTCTTCATCGCGACTTTGCATGCATGCTGTTGAAA 102076
|| | || | |||||||| ||| || |||| |||
Sbjct 14276 GT-TGCACTGTGACTTTGCCTGCCTGATGTTCAAA 14309
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 987334724737955
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |