Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pteronotus_20parnellii_20[genbank_20GCA_5F000465405.1_202013-09-13] 177,401 sequences; 1,960,317,893 total letters Query= NC_003278.1 Length=35580 Score E Sequences producing significant alignments: (Bits) Value seq174924 239 1e-58 >seq174924 Length=7573 Score = 239 bits (264), Expect = 1e-58 Identities = 377/530 (71%), Gaps = 9/530 (2%) Strand=Plus/Minus Query 1532 GCTGCGTCGCTAATGGATCCGAACCCACCAGCGTTCTGCGGCACCACCCCCATCAGCTGC 1591 || || || | ||| || ||||| |||||||| ||||| || || | || | ||||||| Sbjct 3223 GCCGCATCCCGAATCGAACCGAATCCACCAGCATTCTGAGGGACGATACCGAGCAGCTGC 3164 Query 1592 GGATAGACCCGCAGGCCGGCGAGCTGGTCGTCGCGGCTGATGTTCTTGATTGAGCCGAAC 1651 || | || ||||| | || || ||| || ||| | | | |||||| | |||| Sbjct 3163 GGGT-GATGCGCAGCGCCGCCAGTATGTCATCACGGGTCACGCGCTTGATCCCGGTGAAC 3105 Query 1652 TCGTCCTTGGCCGCCACCTCGCTGACCGGAATCAGTTGGATCCCCTCCTTCTTCCCGTTC 1711 || ||||| || || || ||||||| |||||||| || | ||| ||||| || || || Sbjct 3104 TCATCCTTTGCGGCAACTTCGCTGATAGGAATCAGCTGCAACCCGTCCTTGTTGCCATTG 3045 Query 1712 GGCGCGTAGACGAACAGGTTGCGGAAATTGCCAGGCCCCTTCGCG-GTCTT-CAGCGCCG 1769 |||| || |||| |||||||||||||||||| ||||| |||| |||| ||||||| Sbjct 3044 GGCGAGTGCACGAGCAGGTTGCGGAAATTGCCTGGCCCA--CGCGAGTCTCGCAGCGCCT 2987 Query 1770 TGCGCAGCGCGTCGATGTCTTCCTCATTCTG-TGCGGCGTCGGTCATGTAGAGGATGAAG 1828 |||| ||||| | ||| | | | | ||||| |||||||||||| ||||||| Sbjct 2986 CACGCAAGGCGTCCACGTCCATGCCCTCCGGCTGCGG-GTCGGTCATGTAATGGATGAAC 2928 Query 1829 CCGGCGTGGCTGCCGTTGTTGTAGTACTTACGCCGGAACAGCGTGGCCGACTCGTTCAGC 1888 ||||| || |||| | ||||||| || ||||||| ||| ||||| ||||| ||| Sbjct 2927 CCGGCATGCGAGCCGCTTGAGTAGTACCGGCGACGGAACAACGTTGCCGATTCGTTGAGC 2868 Query 1889 AGGGCGCTCTGTAGGGCGCAGAACCACTCCGGCACTCCGTAGATTTCCTGATTGATGTCG 1948 || || ||| | || ||||| ||||||| || ||||||||||||| | ||||| Sbjct 2867 AGCGCCGACTGCACCACGGCCAACCATTCCGGCATCCCATAGATTTCCTGATCGGTGTCG 2808 Query 1949 GCCTCGCGCAGTTGGATCACGCTGCCCTTCTCGAATTCGTGCTCATCCTTCCAGCTGCGC 2008 ||||| ||||| ||| || ||| | || |||||||| || || | ||| Sbjct 2807 GCCTCACGCAGCTGGTATACCGAGCCAAGTGCAAACTCGTGCTCGACCCACCCGGCACGC 2748 Query 2009 ACCTGGTAGAACGTCTCCA-GATCGGTGCCGCGGCGCATGTACTTGGCCA 2057 | ||| ||||| || ||| ||| | ||| ||||||||| ||| |||| Sbjct 2747 AGGTGGAAGAAC-TCACCAGGATGCGCGCCACGGCGCATGCACTGCGCCA 2699 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 113494802919004