Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pteronotus_20parnellii_20[genbank_20GCA_5F000465405.1_202013-09-13]
177,401 sequences; 1,960,317,893 total letters
Query= NC_003278.1
Length=35580
Score E
Sequences producing significant alignments: (Bits) Value
seq174924 239 1e-58
>seq174924
Length=7573
Score = 239 bits (264), Expect = 1e-58
Identities = 377/530 (71%), Gaps = 9/530 (2%)
Strand=Plus/Minus
Query 1532 GCTGCGTCGCTAATGGATCCGAACCCACCAGCGTTCTGCGGCACCACCCCCATCAGCTGC 1591
|| || || | ||| || ||||| |||||||| ||||| || || | || | |||||||
Sbjct 3223 GCCGCATCCCGAATCGAACCGAATCCACCAGCATTCTGAGGGACGATACCGAGCAGCTGC 3164
Query 1592 GGATAGACCCGCAGGCCGGCGAGCTGGTCGTCGCGGCTGATGTTCTTGATTGAGCCGAAC 1651
|| | || ||||| | || || ||| || ||| | | | |||||| | ||||
Sbjct 3163 GGGT-GATGCGCAGCGCCGCCAGTATGTCATCACGGGTCACGCGCTTGATCCCGGTGAAC 3105
Query 1652 TCGTCCTTGGCCGCCACCTCGCTGACCGGAATCAGTTGGATCCCCTCCTTCTTCCCGTTC 1711
|| ||||| || || || ||||||| |||||||| || | ||| ||||| || || ||
Sbjct 3104 TCATCCTTTGCGGCAACTTCGCTGATAGGAATCAGCTGCAACCCGTCCTTGTTGCCATTG 3045
Query 1712 GGCGCGTAGACGAACAGGTTGCGGAAATTGCCAGGCCCCTTCGCG-GTCTT-CAGCGCCG 1769
|||| || |||| |||||||||||||||||| ||||| |||| |||| |||||||
Sbjct 3044 GGCGAGTGCACGAGCAGGTTGCGGAAATTGCCTGGCCCA--CGCGAGTCTCGCAGCGCCT 2987
Query 1770 TGCGCAGCGCGTCGATGTCTTCCTCATTCTG-TGCGGCGTCGGTCATGTAGAGGATGAAG 1828
|||| ||||| | ||| | | | | ||||| |||||||||||| |||||||
Sbjct 2986 CACGCAAGGCGTCCACGTCCATGCCCTCCGGCTGCGG-GTCGGTCATGTAATGGATGAAC 2928
Query 1829 CCGGCGTGGCTGCCGTTGTTGTAGTACTTACGCCGGAACAGCGTGGCCGACTCGTTCAGC 1888
||||| || |||| | ||||||| || ||||||| ||| ||||| ||||| |||
Sbjct 2927 CCGGCATGCGAGCCGCTTGAGTAGTACCGGCGACGGAACAACGTTGCCGATTCGTTGAGC 2868
Query 1889 AGGGCGCTCTGTAGGGCGCAGAACCACTCCGGCACTCCGTAGATTTCCTGATTGATGTCG 1948
|| || ||| | || ||||| ||||||| || ||||||||||||| | |||||
Sbjct 2867 AGCGCCGACTGCACCACGGCCAACCATTCCGGCATCCCATAGATTTCCTGATCGGTGTCG 2808
Query 1949 GCCTCGCGCAGTTGGATCACGCTGCCCTTCTCGAATTCGTGCTCATCCTTCCAGCTGCGC 2008
||||| ||||| ||| || ||| | || |||||||| || || | |||
Sbjct 2807 GCCTCACGCAGCTGGTATACCGAGCCAAGTGCAAACTCGTGCTCGACCCACCCGGCACGC 2748
Query 2009 ACCTGGTAGAACGTCTCCA-GATCGGTGCCGCGGCGCATGTACTTGGCCA 2057
| ||| ||||| || ||| ||| | ||| ||||||||| ||| ||||
Sbjct 2747 AGGTGGAAGAAC-TCACCAGGATGCGCGCCACGGCGCATGCACTGCGCCA 2699
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 113494802919004
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |