Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pteronotus_20parnellii_20[genbank_20GCA_5F000465405.1_202013-09-13] 177,401 sequences; 1,960,317,893 total letters Query= NC_003494.1 Length=111362 Score E Sequences producing significant alignments: (Bits) Value seq6383 102 6e-17 >seq6383 Length=23588 Score = 102 bits (112), Expect = 6e-17 Identities = 281/419 (67%), Gaps = 14/419 (3%) Strand=Plus/Minus Query 22748 TGGCCTTTGCGGCTGTTGAAGGCGTCATGTTTTCTGGGTCATTTGCGGCCATATTCTGGC 22807 |||| ||||| | || ||||| || | || |||||||| || | | |||||||||| Sbjct 7684 TGGCGTTTGCTGAGGTGGAAGGAATCTTCTTCTCTGGGTCTTTCACATCGATATTCTGGC 7625 Query 22808 TGAAGAAACGTTCGCTCATGCCAGGGTTGGCGTTTTCCAACGAGTTGATTAGCCGTGACG 22867 | ||||| || ||| ||||| || | | || |||| |||| | |||||| | || | Sbjct 7624 TCAAGAAGCGAGGGCTGATGCCCGGCCTCACATTCTCCAGCGAGCTTATTAGCAGAGATG 7565 Query 22868 AAGGTCTACACTGTGACTTTGCTTGTATGCTGTTTAGGCAAATGGCAAACAAACCGTGTC 22927 | || | |||||||||||||| || || |||| | || ||||| ||||||| | Sbjct 7564 AGGGCTTGCACTGTGACTTTGCCTGCCTGATGTTCAAACACCTGGCACACAAACCTTCGG 7505 Query 22928 AGGACGATGCACATCAAATCAT-ATCTGATGCCGTTGACATTGAGACGGCTTTCTTCCAA 22986 || | | | | | ||||||| ||| |||| || | || || || ||| || Sbjct 7504 AGCAGAAAGTAAAGGAAATCATCATC-AATGCATTTAAGATAGAACAGGAGTTCCTCACG 7446 Query 22987 GAGGCACT-AAAGACACCCCTACTTGGTATGAATAGTGACAGT-ATGAGACTGTACATAC 23044 ||||| | || | || |||| |||||| || || | |||| || |||||| Sbjct 7445 GAGGCCTTGCCAGTGA-AGCTCATTGGGATGAATTGT-ACTTTGATGAAACAGTACATTG 7388 Query 23045 AGTTTGTTGCAGA---TCGCCTGCTCGATGCCCTGGGTTAT-GCAAAGATGTATAACGTT 23100 | ||||| || || | |||||| || ||||||| | |||| | | | | || Sbjct 7387 AATTTGTGGCCGACAGGCTCCTGCTGGA---GCTGGGTTTTAGCAAGGCTTTCCGA-GTG 7332 Query 23101 GCCAATCCATTTGATTTCATGGATAACATTAGCATTGAAGGTAAAACAAACTTCTTTGA 23159 | || || ||||| |||||||| ||||| | ||||| || || ||||||||||| Sbjct 7331 GAAAACCCGTTTGACTTCATGGAGAACATCTCACTAGAAGGGAAGACCAACTTCTTTGA 7273 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 355463396350603