Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pteronotus_20parnellii_20[genbank_20GCA_5F000465405.1_202013-09-13] 177,401 sequences; 1,960,317,893 total letters Query= NC_004002.1 Length=149955 Score E Sequences producing significant alignments: (Bits) Value seq6383 212 6e-50 seq39192 158 1e-33 seq41434 147 2e-30 seq32390 107 2e-18 seq121209 105 6e-18 >seq6383 Length=23588 Score = 212 bits (234), Expect = 6e-50 Identities = 566/858 (66%), Gaps = 14/858 (2%) Strand=Plus/Plus Query 13566 GAAATAACGCCCATTTTTTGATATTCACTAACTCTTTTTTCAAAGAAGTTAGTTTTACCT 13625 || || || ||||| | |||| || | ||| | || ||||||||||| || || ||| Sbjct 7234 GACATCACCCCCATCCTCTGATTCTCGCCTACTTTCTTCTCAAAGAAGTTGGTCTTCCCT 7293 Query 13626 TCCAGTGATATATTTTCCATAAAATCAAATGGATTTATTGACAT--AAACACTTTATCAC 13683 || ||||| || || ||||| || ||||| || ||| | || ||| ||| | | Sbjct 7294 TCTAGTGAGATGTTCTCCATGAAGTCAAACGGGTTT-TCCACTCGGAAAGCCTTGCTAA- 7351 Query 13684 AACCTAGTTCTAATAGTAATCTATCAGCAATAAACTCAATATATTGAGACATTAAATCAC 13743 |||| || || | || | || || || | ||| ||||| || || ||| ||| || Sbjct 7352 AACCCAGCTCCAGCAGGAGCCTGTCGGCCACAAATTCAATGTACTGTTTCATCAAAGTAC 7411 Query 13744 AATTCATACCTATTAGTTTTACAGGAATTATATTGGTTAAAAATTCTTTTTCTATAGACA 13803 ||||||| || || || || || || | | || | || || | |||||| | Sbjct 7412 AATTCATCCCAATGAGCTTCACTGGCAAGGCCTCCGTGAGGAACTCCTGTTCTATCTTAA 7471 Query 13804 CAGCCTCTTTTATAATAATTGTAATAA---TCTCATTAGAAGGAGGATATTTTAGATGTT 13860 || | | || || ||| | | ||| | ||||| | | || |||| Sbjct 7472 ATGCAT---TGATGATGATTTCCTTTACTTTCTGCTCCGAAGGTTTGTGTGCCAGGTGTT 7528 Query 13861 TAAAAATTAAACACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTG 13920 | || || | || ||||| ||||| || | |||||||||||| |||||||| ||| | | Sbjct 7529 TGAACATCAGGCAGGCAAAGTCACAGTGCAAGCCCTCATCTCTGCTAATAAGCTCGCTGG 7588 Query 13921 AAAATGTTAATCCTGGCATCAATCCTCGtttttttAACCAAAATATTGCAGCAAATGACC 13980 | ||||| | || ||||||| ||||| || || | ||| ||||| | | || |||| Sbjct 7589 AGAATGTGAGGCCGGGCATCAGCCCTCGCTTCTTGAGCCAGAATATCGATGTGAAAGACC 7648 Query 13981 CGGAAAAGAATATTCCCTCAACTGCAGCAAACGCTATTAATCGTTCTCCAAACGATGCTT 14040 | || ||||| ||||| || || |||||||||| | | || |||||| | | || | Sbjct 7649 CAGAGAAGAAGATTCCTTCCACCTCAGCAAACGCCACCACGCGCTCTCCATAGGTGGCCT 7708 Query 14041 TTTTGTTCGATATCCATTTTCTAGCCCATTCAGAtttttttttAATAAAATCCATTGTTT 14100 ||||| | ||||| ||||| || | || || || | | || ||| | | Sbjct 7709 CTTTGTCCCCAATCCAACGCAAGGCCCAGTCTGCCTTCTTCTTGACACAAGGCATCTTCT 7768 Query 14101 CAATAGCATTAAATAAATATTCCTTCTCTTT--AGTACTTGAAATGTATGTATCAATAAG 14158 | || ||||| || | | ||| ||||||| || ||| ||||| || || || || Sbjct 7769 CGATGGCATTGAAGAGGAACTCCCTCTCTTTGGGGTCTTTG--ATGTAAGTGTCGATGAG 7826 Query 14159 TAAGCTATACATTTCAGAGTGTATGTTTTCCATAGCTATCTGAAAACCATAAAAGCATCT 14218 | ||| ||||| ||||| |||||||||||||| || ||||| || ||||| ||||| | Sbjct 7827 GAGGCTGTACATCTCAGAATGTATGTTTTCCATGGCGATCTGGAAGCCATAGAAGCAGCG 7886 Query 14219 AGCTTCCGACCATTGTACTTCCGAGTAAAATCTTTCGGCCAAATTTTCATTAACTATACC 14278 ||||| | || |||||| | || | || |||| |||||||| || || || Sbjct 7887 GGCTTCTGTGATCTGAACTTCCTGGCTGAACCGCTCCACCAAGTTTTCATTCACGATGCC 7946 Query 14279 ATCACTAGCTGCAAAAAATGCCAATATGTTTTTAATAAAGTATTGCTCTTCATTGTTGAG 14338 ||| || |||||||| || |||| | || ||| ||||| ||| || | || || Sbjct 7947 ATCGCTGGCTGCAAAGAACGCCAGGACGTGCGAAATGAAGTACCTCTCGTCGTCCTTCAG 8006 Query 14339 TTTTTTCCAATCGGATAAATCCTTAGAAAGATCTACTTCATCAACTGTCCAAAAACTAGC 14398 | | ||| | | ||||| ||||| || || || || ||||||| || ||| Sbjct 8007 GGTCTCCCAGTGCAGCAGGTCCTTGGAAAGGTCCACCTCCTCCGCTGTCCAGAAGGAAGC 8066 Query 14399 GACAGCTTTTTTATACAT 14416 | || || || ||||| Sbjct 8067 CTCGGCCTTCTTGTACAT 8084 >seq39192 Length=20454 Score = 158 bits (174), Expect = 1e-33 Identities = 548/842 (65%), Gaps = 25/842 (3%) Strand=Plus/Minus Query 13566 GAAATAACGCCCATTTTTTGATATTCACTAACTCTTTT--TTCAAAGAA------GTTAG 13617 || || || ||||| | ||||| |||| |||||| | |||||| || ||| | Sbjct 14610 GACATCACTCCCATCCTCTGATACTCACCTACTCTTCTCTTTCAAACAAAAGGATGTTTG 14551 Query 13618 TTTTACCTTCCAGTGATATATTTTCCATAAAATCAAATGGATTTATTGACATAAACA-CT 13676 | || | ||||||||| | |||||||| || |||||||| ||| | ||| | | | | Sbjct 14550 TCTTCCTTTCCAGTGAAGTGTTTTCCATGAAGTCAAATGGGTTT-TAGACTTGGAAAGCC 14492 Query 13677 TTATCACAACCTAGTTCTAATAGTAATCTATCAGCAATAAACTCAATATATTGAGACATT 13736 || | |||||| || || | || | || | || | ||| ||||| || || || Sbjct 14491 TTGTTACAACCCAGCTCCAGCAGGAGCCTGTTGGCCACAAATTCAATGTACTGCTTCACC 14432 Query 13737 AAATCACAATTCATACCTATTAGTTTTACAGGAATTATATTGGTTAAAAA-TTCTTTTTC 13795 ||| ||||||||| || | || || || || | | || | || |||| ||| Sbjct 14431 AAAGTACAATTCATCCCATTGAGCTTCACTGGCAAGGCCTCTGTGAGGAACTTCTGTTT- 14373 Query 13796 TATAGACACAGCCTCTTTTATAATAATTGTAATAA---TCTCATTAGAAGGAGGATATTT 13852 ||| | | || | || ||||| ||| | | | ||| || || | | | Sbjct 14372 TAT---CCTAACCACATTGATAATGATTTCATTTACTCTCTGATCCAAATGTTTGTGTAG 14316 Query 13853 TAGATGTTTAAAAATTAAACACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAG 13912 || ||||| || || | || ||||| ||||| || | ||||||||||| ||||||| Sbjct 14315 CAGGTGTTTGAACATCAGGCAGGCAAAGTCACAGTGCAA-CCCTCATCTCTGTTAATAAG 14257 Query 13913 TTCGTTTGAAAATGTTAATCCTGGCATCAATCCTCGtttttttAACCAAAATATTGCAGC 13972 || || || ||||| | || ||||||| ||||| || || | || ||||| | Sbjct 14256 CTCATTGGAGAATGTGAGGCCAGGCATCAGCCCTCGCTTCTTGAGCCCGAATATCAATGT 14197 Query 13973 AAATGACCCGGAAAAGAATATTCCCTCAACTGCAGCAAACGCTATTAATCGTTCTCCAAA 14032 | ||||| |||||||| ||||| || | |||||||| | | | || |||||| | Sbjct 14196 GGAAGACCCAGAAAAGAAGATTCCTTCCATGGCAGCAAAGGTCACCACACGATCTCCATA 14137 Query 14033 CGATGCTTTTTTGTTCGATATCCATTTTCTAGCCCATTCAGAtttttttttAATAAAATC 14092 | || | ||||| | ||||| || || || | | || || | | || Sbjct 14136 GGGGGCCTCTTTGTCCCCAATCCAACGCAAGGCTCAGTC---TGTCTTCTTGACACAAGG 14080 Query 14093 CATTGTTTCAATAGCATTAAATAAATATTCCTTC-TCTT-TAGTACTTGAAATGTATGTA 14150 ||| ||||||| | || || | | ||| || |||| || |||| |||||| || Sbjct 14079 CATCATTTCAATGACGTTGAAGAGGCACTCCCTCTTCTTGGGGTCCTTG-AATGTAAGTG 14021 Query 14151 TCAATAAGTAAGCTATACATTTCAGAGTGTATGTTTTCCATAGCTATCTGAAAACCATAA 14210 || || || |||||||||| ||||| |||||||||||||| || | ||| || || || Sbjct 14020 TCTATGAGGAAGCTATACACCTCAGAATGTATGTTTTCCATGGCAACCTGGAAGCCGTAG 13961 Query 14211 AAGCATCTAGCTTCCGACCATTGTACTTCCGAGTAAAATCTTTCGGCCAAATTTTCATTA 14270 ||||| | |||| | || |||||| | ||| | || |||| ||| |||| Sbjct 13960 AAGCAGCAGGCTTTTGTGATCTGAACTTCCTGGCTAAACCGCTCCACCAAGTTTGCATTC 13901 Query 14271 ACTATACCATCACTAGCTGCAAAAAATGCCAATATGTTTTTAATAAAGTATTGCTCTTCA 14330 | || |||||||| ||||||| || |||| | || ||| ||||| || || Sbjct 13900 ATGATGCCATCACTCACTGCAAAGAACGCCAGGACGTGGGAAATGAAGTACCTCTTGTCG 13841 Query 14331 TTGTTGAGTTTTTTCCAATCGGATAAATCCTTAGAAAGATCTACTTCATCAACTGTCCAA 14390 | || | | | ||| | | | ||| ||||| ||||| || ||| |||||||| Sbjct 13840 TGCTTCATGGTCTCCCAGTGCAGCAGGTTCTTGGAAAGGTCTACCTCCTCAGCTGTCCAA 13781 Query 14391 AA 14392 || Sbjct 13780 AA 13779 >seq41434 Length=11022 Score = 147 bits (162), Expect = 2e-30 Identities = 477/733 (65%), Gaps = 12/733 (2%) Strand=Plus/Minus Query 13575 CCCATTTTTTGATATTCACTAACTCTTTTTTCAAAGAAGTTAGTTTTACCTTCCAGTGAT 13634 ||||| | |||||||| | | ||||| ||||||||||| || || || |||||||| Sbjct 7889 CCCATCCTCTGATATTCGCCTTCGCTTTTCTCAAAGAAGTTGGTCTTCCCCTCCAGTGAA 7830 Query 13635 ATATTTTCCATAAAATCAAATGGATTTATTGACAT--AAACACTTTATCACAACCTAGTT 13692 ||||| ||||| || ||||| | ||| | || | ||| ||| | | |||| | | Sbjct 7829 ATATTCTCCATGAAGTCAAACCGGTTT-TCAACTTGGAAAGCCTTGCTAA-AACCCAACT 7772 Query 13693 CTAATAGTAATCTATCAGCAATAAACTCAATATATTGAGACATTAAATCACAATTCATAC 13752 | | || | || ||||| || || | ||| || || ||| ||| |||||||| | Sbjct 7771 CCAGCAGGAGCCTGTCAGCCATGAATTGAATGTACTGCTTCATCAAAGTGCAATTCATGC 7712 Query 13753 CTATTAGTTTTACAGGAATTATATTGGTTAAAAATTCTTTTTCTATAGACACAGCCTCTT 13812 | || || || || || | | ||| | || || | |||||| | | || | | Sbjct 7711 CAATGAGCTTCACTGGCAAGGCCTCGGTGAGGAACTCCTCTTCTAT---CCTAACCGCAT 7655 Query 13813 TTATAATAATTGTAATAA---TCTCATTAGAAGGAGGATATTTTAGATGTTTAAAAATTA 13869 | ||||| ||| | | | ||| | ||||| || || ||||| || || | Sbjct 7654 TAATAATTATTTCATTTACTCTCTGCTCTGAAGGTTTGTACAACAGGTGTTTGAACATCA 7595 Query 13870 AACACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTA 13929 || ||||| || || ||| |||||||||||| |||||||| ||| | || ||||| | Sbjct 7594 GGCAGGCAAAGTCCCAGTGATAGCCCTCATCTCTGCTAATAAGCTCGCTGGAGAATGTGA 7535 Query 13930 ATCCTGGCATCAATCCTCGtttttttAACCAAAATATTGCAGCAAATGACCCGGAAAAGA 13989 || ||||||| ||||| || | | ||| ||||||| | || ||||| ||||||| Sbjct 7534 GACCAGGCATCAGCCCTCGCTTCCTGAGCCAGAATATTGATGTGAAAGACCCAGAAAAGA 7475 Query 13990 ATATTCCCTCAACTGCAGCAAACGCTATTAATCGTTCTCCAAACGATGCTTTTTTGTTCG 14049 | |||| | || ||||||| || | | | |||||| | | | | ||||| | Sbjct 7474 AGGTTCCTTGCACCTCAGCAAAGGCCACCACATGCTCTCCACAGGTGGTCTCTTTGTCCC 7415 Query 14050 ATATCCATTTTCTAGCCCATTCAGAtttttttttAATAAAATCCAT-TGTTTCAATAGCA 14108 ||||| ||||| | || || || | | || ||| |||| || ||| Sbjct 7414 CGATCCAGCGCAAGGCCCAGTATACCTTCTTCTTGACACAAGGCATCAGTTTGAA-GGCA 7356 Query 14109 TTAAATAAATATTCCTTCTCTTTAGTACTTGAAATGTATGTATCAATAAGTAAGCTATAC 14168 || || | | ||| | || || | | || || || | | || | ||| ||| Sbjct 7355 TTGAAGAGGAACTCCCTTTCCTTGTGATCTTTGATATAAGTGTTGAGGAGGAGGCTGTAC 7296 Query 14169 ATTTCAGAGTGTATGTTTTCCATAGCTATCTGAAAACCATAAAAGCATCTAGCTTCCGAC 14228 || ||||| ||||| |||||||| || ||||| || || || ||||| | ||||| | Sbjct 7295 ATCTCAGAATGTATATTTTCCATGGCAATCTGGAAGCCGTAGAAGCAGCAGGCTTCTGTG 7236 Query 14229 CATTGTACTTCCGAGTAAAATCTTTCGGCCAAATTTTCATTAACTATACCATCACTAGCT 14288 || |||| | | | | || |||| |||||||| || || |||| ||| ||| Sbjct 7235 ATCTGAACTTGCTGGCTATACTGCTCCACCAAGTTTTCATTCACAATGCCATTACTTGCT 7176 Query 14289 GCAAAAAATGCCA 14301 |||| ||| ||| Sbjct 7175 ACAAAGAATCCCA 7163 >seq32390 Length=18494 Score = 107 bits (118), Expect = 2e-18 Identities = 95/119 (80%), Gaps = 0/119 (0%) Strand=Plus/Minus Query 13896 TCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCTGGCATCAATCCTCGttttttt 13955 |||||||| || || ||||| || ||||| || | ||| ||||| | |||| ||| ||| Sbjct 1993 TCATCTCTGCTGATGAGTTCATTGGAAAAGGTGAGTCCAGGCATAAGACCTCTTTTCTTT 1934 Query 13956 AACCAAAATATTGCAGCAAATGACCCGGAAAAGAATATTCCCTCAACTGCAGCAAACGC 14014 ||||| |||||||||||||| || || || ||||| ||||| || || |||||||| || Sbjct 1933 AACCAGAATATTGCAGCAAAAGATCCCGAGAAGAAAATTCCTTCTACAGCAGCAAAGGC 1875 >seq121209 Length=2218 Score = 105 bits (116), Expect = 6e-18 Identities = 96/121 (79%), Gaps = 0/121 (0%) Strand=Plus/Plus Query 13894 CCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCTGGCATCAATCCTCGttttt 13953 |||||||||| |||||||| ||||| || ||||| | || ||||||| ||||| |||| Sbjct 1711 CCTCATCTCTGCTAATAAGCTCGTTGGAGAATGTGAGGCCGGGCATCAGCCCTCGCTTTT 1770 Query 13954 ttAACCAAAATATTGCAGCAAATGACCCGGAAAAGAATATTCCCTCAACTGCAGCAAACG 14013 | | ||| ||||| | || || ||||| || ||||| ||||| || || |||||||||| Sbjct 1771 TGAGCCAGAATATCGATGCGAAAGACCCAGAGAAGAAGATTCCTTCCACCGCAGCAAACG 1830 Query 14014 C 14014 | Sbjct 1831 C 1831 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478664197163400