Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pteronotus_20parnellii_20[genbank_20GCA_5F000465405.1_202013-09-13] 177,401 sequences; 1,960,317,893 total letters Query= NC_004003.1 Length=149599 Score E Sequences producing significant alignments: (Bits) Value seq6383 205 9e-48 seq39192 134 1e-26 seq41434 125 7e-24 seq32390 107 2e-18 seq121209 105 6e-18 >seq6383 Length=23588 Score = 205 bits (226), Expect = 9e-48 Identities = 564/856 (66%), Gaps = 10/856 (1%) Strand=Plus/Plus Query 13354 GAAATAACGCCCATTTTTTGATATTCACTAACTCTTTTTTCAAAAAAGTTAGTTTTACCT 13413 || || || ||||| | |||| || | ||| | || ||||| ||||| || || ||| Sbjct 7234 GACATCACCCCCATCCTCTGATTCTCGCCTACTTTCTTCTCAAAGAAGTTGGTCTTCCCT 7293 Query 13414 TCCAGTGATATATTTTCCATAAAATCGAATGGATTTGTTGACAT--AAACACTTTATCAC 13471 || ||||| || || ||||| || || || || ||| | || ||| ||| | | Sbjct 7294 TCTAGTGAGATGTTCTCCATGAAGTCAAACGGGTTT-TCCACTCGGAAAGCCTTGCTAA- 7351 Query 13472 AACCTAGTTCTAATAATAATCTATCAGCAATAAACTCAATATATTGAGACATTAAATCAC 13531 |||| || || | | | || || || | ||| ||||| || || ||| ||| || Sbjct 7352 AACCCAGCTCCAGCAGGAGCCTGTCGGCCACAAATTCAATGTACTGTTTCATCAAAGTAC 7411 Query 13532 AATTCATACCTATTAGTTTTACAGGAATTATATTAGTTAAAAATTCTTTTTCTATAGACA 13591 ||||||| || || || || || || | | || | || || | |||||| | Sbjct 7412 AATTCATCCCAATGAGCTTCACTGGCAAGGCCTCCGTGAGGAACTCCTGTTCTATCTTAA 7471 Query 13592 CAGCCTCGTTTATAATAATCTTAATAATGTCATTAGAAGGAGGATATTTTAGATGTTTAA 13651 || | | | || || ||| | | | | ||||| | | || ||||| | Sbjct 7472 ATGCATTGATGATGATTTCCTTTACTTTCTGCTCCGAAGGTTTGTGTGCCAGGTGTTTGA 7531 Query 13652 AAATTAAACACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAA 13711 | || | || ||||| ||||| || | |||||||||||| |||||||| ||| | || | Sbjct 7532 ACATCAGGCAGGCAAAGTCACAGTGCAAGCCCTCATCTCTGCTAATAAGCTCGCTGGAGA 7591 Query 13712 ATGTTAATCCTGGCATCAATCCTCGtttttttAACCAAAATATTGCAGCGAATGATCCGG 13771 |||| | || ||||||| ||||| || || | ||| ||||| | | ||| || || | Sbjct 7592 ATGTGAGGCCGGGCATCAGCCCTCGCTTCTTGAGCCAGAATATCGATGTGAAAGACCCAG 7651 Query 13772 AAAAGAATATTCCCTCAACTGCAGCAAACGCTATTAGTCGTTCTCCAAACGATGCTTTTT 13831 | ||||| ||||| || || |||||||||| | | || |||||| | | || | || Sbjct 7652 AGAAGAAGATTCCTTCCACCTCAGCAAACGCCACCACGCGCTCTCCATAGGTGGCCTCTT 7711 Query 13832 TGTTTGATATCCATTTTCTAGCCCATTCAGAtttttttttAATAAAATCCATTGTTTCGA 13891 ||| ||||| ||||| || | || || || | | || ||| | |||| Sbjct 7712 TGTCCCCAATCCAACGCAAGGCCCAGTCTGCCTTCTTCTTGACACAAGGCATCTTCTCGA 7771 Query 13892 TTGCATTGAATAAATGTTCCTTCTCTTT--AGTACTTGAAATGTATGTATCAATAAGTAA 13949 | |||||||| | ||| ||||||| || ||| ||||| || || || || | Sbjct 7772 TGGCATTGAAGAGGAACTCCCTCTCTTTGGGGTCTTTG--ATGTAAGTGTCGATGAGGAG 7829 Query 13950 GCTATACATTTCAGAGTGTATGTTTTCTATAGCTATCTGAAAACCATAAAAACATCTAGC 14009 ||| ||||| ||||| ||||||||||| || || ||||| || ||||| || || | || Sbjct 7830 GCTGTACATCTCAGAATGTATGTTTTCCATGGCGATCTGGAAGCCATAGAAGCAGCGGGC 7889 Query 14010 TTCTGACCATTGTACCTCCGAGTAAAATCTTTCTGCCAAGTTTTCATTAACAATACCATC 14069 ||||| || || ||| | || | || ||||||||||||| || || ||||| Sbjct 7890 TTCTGTGATCTGAACTTCCTGGCTGAACCGCTCCACCAAGTTTTCATTCACGATGCCATC 7949 Query 14070 ACTAGCTGCAAAAAATGCCAATATGTTTTTAATAAAGTATTGCTCTTCATTGTTGAGTTT 14129 || |||||||| || |||| | || ||| ||||| ||| || | || || | Sbjct 7950 GCTGGCTGCAAAGAACGCCAGGACGTGCGAAATGAAGTACCTCTCGTCGTCCTTCAGGGT 8009 Query 14130 TTTCCAAT-CGGCTAAATCCTTAGAAAGATCTACTTCATCAACTGTCCAAAAACTAGCGA 14188 | ||| | | || | ||||| ||||| || || || || ||||||| || ||| Sbjct 8010 CTCCCAGTGCAGC-AGGTCCTTGGAAAGGTCCACCTCCTCCGCTGTCCAGAAGGAAGCCT 8068 Query 14189 CAGCTTTTTTATACAT 14204 | || || || ||||| Sbjct 8069 CGGCCTTCTTGTACAT 8084 >seq39192 Length=20454 Score = 134 bits (148), Expect = 1e-26 Identities = 359/542 (66%), Gaps = 9/542 (2%) Strand=Plus/Minus Query 13642 AGATGTTTAAAAATTAAACACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGT 13701 || ||||| || || | || ||||| ||||| || | ||||||||||| ||||||| Sbjct 14314 AGGTGTTTGAACATCAGGCAGGCAAAGTCACAGTGCAA-CCCTCATCTCTGTTAATAAGC 14256 Query 13702 TCGTTTGAAAATGTTAATCCTGGCATCAATCCTCGtttttttAACCAAAATATTGCAGCG 13761 || || || ||||| | || ||||||| ||||| || || | || ||||| | | Sbjct 14255 TCATTGGAGAATGTGAGGCCAGGCATCAGCCCTCGCTTCTTGAGCCCGAATATCAATGTG 14196 Query 13762 AATGATCCGGAAAAGAATATTCCCTCAACTGCAGCAAACGCTATTAGTCGTTCTCCAAAC 13821 | || || |||||||| ||||| || | |||||||| | | | || |||||| | Sbjct 14195 GAAGACCCAGAAAAGAAGATTCCTTCCATGGCAGCAAAGGTCACCACACGATCTCCATAG 14136 Query 13822 GATGCTTTTTTGTTTGATATCCATTTTCTAGCCCATTCAGAtttttttttAATAAAATCC 13881 | || | ||||| ||||| || || || | | || || | | || | Sbjct 14135 GGGGCCTCTTTGTCCCCAATCCAACGCAAGGCTCAGTCTG---TCTTCTTGACACAAGGC 14079 Query 13882 ATTGTTTCGATTGCATTGAATAAATGTTCCTTCTCTTTAG--TACTTGAAATGTATGTAT 13939 || |||| || | ||||| | ||| ||| || | | |||||| |||| || | Sbjct 14078 ATCATTTCAATGACGTTGAAGAGGCACTCCCTCTTCTTGGGGTCCTTGAA-TGTAAGTGT 14020 Query 13940 CAATAAGTAAGCTATACATTTCAGAGTGTATGTTTTCTATAGCTATCTGAAAACCATAAA 13999 | || || |||||||||| ||||| ||||||||||| || || | ||| || || || | Sbjct 14019 CTATGAGGAAGCTATACACCTCAGAATGTATGTTTTCCATGGCAACCTGGAAGCCGTAGA 13960 Query 14000 AACATCTAGCTTCTGACCATTGTACCTCCGAGTAAAATCTTTCTGCCAAGTTTTCATTAA 14059 | || | |||| || || || ||| | ||| | || |||||||| |||| | Sbjct 13959 AGCAGCAGGCTTTTGTGATCTGAACTTCCTGGCTAAACCGCTCCACCAAGTTTGCATTCA 13900 Query 14060 CAATACCATCACTAGCTGCAAAAAATGCCAATATGTTTTTAATAAAGTATTGCTCTTCAT 14119 || |||||||| ||||||| || |||| | || ||| ||||| || || | Sbjct 13899 TGATGCCATCACTCACTGCAAAGAACGCCAGGACGTGGGAAATGAAGTACCTCTTGTCGT 13840 Query 14120 TGTTGAGTTTTTTCCAAT-CGGCTAAATCCTTAGAAAGATCTACTTCATCAACTGTCCAA 14178 || | | | ||| | | || | | ||| ||||| ||||| || ||| |||||||| Sbjct 13839 GCTTCATGGTCTCCCAGTGCAGC-AGGTTCTTGGAAAGGTCTACCTCCTCAGCTGTCCAA 13781 Query 14179 AA 14180 || Sbjct 13780 AA 13779 >seq41434 Length=11022 Score = 125 bits (138), Expect = 7e-24 Identities = 472/733 (64%), Gaps = 12/733 (2%) Strand=Plus/Minus Query 13363 CCCATTTTTTGATATTCACTAACTCTTTTTTCAAAAAAGTTAGTTTTACCTTCCAGTGAT 13422 ||||| | |||||||| | | ||||| ||||| ||||| || || || |||||||| Sbjct 7889 CCCATCCTCTGATATTCGCCTTCGCTTTTCTCAAAGAAGTTGGTCTTCCCCTCCAGTGAA 7830 Query 13423 ATATTTTCCATAAAATCGAATGGATTTGTTGACAT--AAACACTTTATCACAACCTAGTT 13480 ||||| ||||| || || || | ||| | || | ||| ||| | | |||| | | Sbjct 7829 ATATTCTCCATGAAGTCAAACCGGTTT-TCAACTTGGAAAGCCTTGCTAA-AACCCAACT 7772 Query 13481 CTAATAATAATCTATCAGCAATAAACTCAATATATTGAGACATTAAATCACAATTCATAC 13540 | | | | || ||||| || || | ||| || || ||| ||| |||||||| | Sbjct 7771 CCAGCAGGAGCCTGTCAGCCATGAATTGAATGTACTGCTTCATCAAAGTGCAATTCATGC 7712 Query 13541 CTATTAGTTTTACAGGAATTATATTAGTTAAAAATTCTTTTTCTATAGACACAGCCTCGT 13600 | || || || || || | | || | || || | |||||| | | || | | Sbjct 7711 CAATGAGCTTCACTGGCAAGGCCTCGGTGAGGAACTCCTCTTCTAT---CCTAACCGCAT 7655 Query 13601 TTATAATAATCTTAATAA---TGTCATTAGAAGGAGGATATTTTAGATGTTTAAAAATTA 13657 | ||||| || | | | | | | | ||||| || || ||||| || || | Sbjct 7654 TAATAATTATTTCATTTACTCTCTGCTCTGAAGGTTTGTACAACAGGTGTTTGAACATCA 7595 Query 13658 AACACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTA 13717 || ||||| || || ||| |||||||||||| |||||||| ||| | || ||||| | Sbjct 7594 GGCAGGCAAAGTCCCAGTGATAGCCCTCATCTCTGCTAATAAGCTCGCTGGAGAATGTGA 7535 Query 13718 ATCCTGGCATCAATCCTCGtttttttAACCAAAATATTGCAGCGAATGATCCGGAAAAGA 13777 || ||||||| ||||| || | | ||| ||||||| | ||| || || ||||||| Sbjct 7534 GACCAGGCATCAGCCCTCGCTTCCTGAGCCAGAATATTGATGTGAAAGACCCAGAAAAGA 7475 Query 13778 ATATTCCCTCAACTGCAGCAAACGCTATTAGTCGTTCTCCAAACGATGCTTTTTTGTTTG 13837 | |||| | || ||||||| || | | | |||||| | | | | ||||| Sbjct 7474 AGGTTCCTTGCACCTCAGCAAAGGCCACCACATGCTCTCCACAGGTGGTCTCTTTGTCCC 7415 Query 13838 ATATCCATTTTCTAGCCCATTCAGAtttttttttAATAAAATCCATTGTTTCGATTGCAT 13897 ||||| ||||| | || || || | | || ||| || || |||| Sbjct 7414 CGATCCAGCGCAAGGCCCAGTATACCTTCTTCTTGACACAAGGCATCAGTTTGAAGGCAT 7355 Query 13898 TGAATA-AATGTTCCTTCTCTTTAGTACTTGAAATGTATGTATCAATAAGTAAGCTATAC 13956 |||| | | | |||| ||| | ||| || || || | | || | ||| ||| Sbjct 7354 TGAAGAGGAACTCCCTTTCCTTGTGATCTT-TGATATAAGTGTTGAGGAGGAGGCTGTAC 7296 Query 13957 ATTTCAGAGTGTATGTTTTCTATAGCTATCTGAAAACCATAAAAACATCTAGCTTCTGAC 14016 || ||||| ||||| ||||| || || ||||| || || || || || | ||||||| Sbjct 7295 ATCTCAGAATGTATATTTTCCATGGCAATCTGGAAGCCGTAGAAGCAGCAGGCTTCTGTG 7236 Query 14017 CATTGTACCTCCGAGTAAAATCTTTCTGCCAAGTTTTCATTAACAATACCATCACTAGCT 14076 || || | | | | | || ||||||||||||| ||||| |||| ||| ||| Sbjct 7235 ATCTGAACTTGCTGGCTATACTGCTCCACCAAGTTTTCATTCACAATGCCATTACTTGCT 7176 Query 14077 GCAAAAAATGCCA 14089 |||| ||| ||| Sbjct 7175 ACAAAGAATCCCA 7163 >seq32390 Length=18494 Score = 107 bits (118), Expect = 2e-18 Identities = 95/119 (80%), Gaps = 0/119 (0%) Strand=Plus/Minus Query 13684 TCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCTGGCATCAATCCTCGttttttt 13743 |||||||| || || ||||| || ||||| || | ||| ||||| | |||| ||| ||| Sbjct 1993 TCATCTCTGCTGATGAGTTCATTGGAAAAGGTGAGTCCAGGCATAAGACCTCTTTTCTTT 1934 Query 13744 AACCAAAATATTGCAGCGAATGATCCGGAAAAGAATATTCCCTCAACTGCAGCAAACGC 13802 ||||| ||||||||||| || ||||| || ||||| ||||| || || |||||||| || Sbjct 1933 AACCAGAATATTGCAGCAAAAGATCCCGAGAAGAAAATTCCTTCTACAGCAGCAAAGGC 1875 >seq121209 Length=2218 Score = 105 bits (116), Expect = 6e-18 Identities = 96/121 (79%), Gaps = 0/121 (0%) Strand=Plus/Plus Query 13682 CCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCTGGCATCAATCCTCGttttt 13741 |||||||||| |||||||| ||||| || ||||| | || ||||||| ||||| |||| Sbjct 1711 CCTCATCTCTGCTAATAAGCTCGTTGGAGAATGTGAGGCCGGGCATCAGCCCTCGCTTTT 1770 Query 13742 ttAACCAAAATATTGCAGCGAATGATCCGGAAAAGAATATTCCCTCAACTGCAGCAAACG 13801 | | ||| ||||| | ||||| || || || ||||| ||||| || || |||||||||| Sbjct 1771 TGAGCCAGAATATCGATGCGAAAGACCCAGAGAAGAAGATTCCTTCCACCGCAGCAAACG 1830 Query 13802 C 13802 | Sbjct 1831 C 1831 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 477527523353640