Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pteronotus_20parnellii_20[genbank_20GCA_5F000465405.1_202013-09-13]
177,401 sequences; 1,960,317,893 total letters
Query= NC_004003.1
Length=149599
Score E
Sequences producing significant alignments: (Bits) Value
seq6383 205 9e-48
seq39192 134 1e-26
seq41434 125 7e-24
seq32390 107 2e-18
seq121209 105 6e-18
>seq6383
Length=23588
Score = 205 bits (226), Expect = 9e-48
Identities = 564/856 (66%), Gaps = 10/856 (1%)
Strand=Plus/Plus
Query 13354 GAAATAACGCCCATTTTTTGATATTCACTAACTCTTTTTTCAAAAAAGTTAGTTTTACCT 13413
|| || || ||||| | |||| || | ||| | || ||||| ||||| || || |||
Sbjct 7234 GACATCACCCCCATCCTCTGATTCTCGCCTACTTTCTTCTCAAAGAAGTTGGTCTTCCCT 7293
Query 13414 TCCAGTGATATATTTTCCATAAAATCGAATGGATTTGTTGACAT--AAACACTTTATCAC 13471
|| ||||| || || ||||| || || || || ||| | || ||| ||| | |
Sbjct 7294 TCTAGTGAGATGTTCTCCATGAAGTCAAACGGGTTT-TCCACTCGGAAAGCCTTGCTAA- 7351
Query 13472 AACCTAGTTCTAATAATAATCTATCAGCAATAAACTCAATATATTGAGACATTAAATCAC 13531
|||| || || | | | || || || | ||| ||||| || || ||| ||| ||
Sbjct 7352 AACCCAGCTCCAGCAGGAGCCTGTCGGCCACAAATTCAATGTACTGTTTCATCAAAGTAC 7411
Query 13532 AATTCATACCTATTAGTTTTACAGGAATTATATTAGTTAAAAATTCTTTTTCTATAGACA 13591
||||||| || || || || || || | | || | || || | |||||| |
Sbjct 7412 AATTCATCCCAATGAGCTTCACTGGCAAGGCCTCCGTGAGGAACTCCTGTTCTATCTTAA 7471
Query 13592 CAGCCTCGTTTATAATAATCTTAATAATGTCATTAGAAGGAGGATATTTTAGATGTTTAA 13651
|| | | | || || ||| | | | | ||||| | | || ||||| |
Sbjct 7472 ATGCATTGATGATGATTTCCTTTACTTTCTGCTCCGAAGGTTTGTGTGCCAGGTGTTTGA 7531
Query 13652 AAATTAAACACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAA 13711
| || | || ||||| ||||| || | |||||||||||| |||||||| ||| | || |
Sbjct 7532 ACATCAGGCAGGCAAAGTCACAGTGCAAGCCCTCATCTCTGCTAATAAGCTCGCTGGAGA 7591
Query 13712 ATGTTAATCCTGGCATCAATCCTCGtttttttAACCAAAATATTGCAGCGAATGATCCGG 13771
|||| | || ||||||| ||||| || || | ||| ||||| | | ||| || || |
Sbjct 7592 ATGTGAGGCCGGGCATCAGCCCTCGCTTCTTGAGCCAGAATATCGATGTGAAAGACCCAG 7651
Query 13772 AAAAGAATATTCCCTCAACTGCAGCAAACGCTATTAGTCGTTCTCCAAACGATGCTTTTT 13831
| ||||| ||||| || || |||||||||| | | || |||||| | | || | ||
Sbjct 7652 AGAAGAAGATTCCTTCCACCTCAGCAAACGCCACCACGCGCTCTCCATAGGTGGCCTCTT 7711
Query 13832 TGTTTGATATCCATTTTCTAGCCCATTCAGAtttttttttAATAAAATCCATTGTTTCGA 13891
||| ||||| ||||| || | || || || | | || ||| | ||||
Sbjct 7712 TGTCCCCAATCCAACGCAAGGCCCAGTCTGCCTTCTTCTTGACACAAGGCATCTTCTCGA 7771
Query 13892 TTGCATTGAATAAATGTTCCTTCTCTTT--AGTACTTGAAATGTATGTATCAATAAGTAA 13949
| |||||||| | ||| ||||||| || ||| ||||| || || || || |
Sbjct 7772 TGGCATTGAAGAGGAACTCCCTCTCTTTGGGGTCTTTG--ATGTAAGTGTCGATGAGGAG 7829
Query 13950 GCTATACATTTCAGAGTGTATGTTTTCTATAGCTATCTGAAAACCATAAAAACATCTAGC 14009
||| ||||| ||||| ||||||||||| || || ||||| || ||||| || || | ||
Sbjct 7830 GCTGTACATCTCAGAATGTATGTTTTCCATGGCGATCTGGAAGCCATAGAAGCAGCGGGC 7889
Query 14010 TTCTGACCATTGTACCTCCGAGTAAAATCTTTCTGCCAAGTTTTCATTAACAATACCATC 14069
||||| || || ||| | || | || ||||||||||||| || || |||||
Sbjct 7890 TTCTGTGATCTGAACTTCCTGGCTGAACCGCTCCACCAAGTTTTCATTCACGATGCCATC 7949
Query 14070 ACTAGCTGCAAAAAATGCCAATATGTTTTTAATAAAGTATTGCTCTTCATTGTTGAGTTT 14129
|| |||||||| || |||| | || ||| ||||| ||| || | || || |
Sbjct 7950 GCTGGCTGCAAAGAACGCCAGGACGTGCGAAATGAAGTACCTCTCGTCGTCCTTCAGGGT 8009
Query 14130 TTTCCAAT-CGGCTAAATCCTTAGAAAGATCTACTTCATCAACTGTCCAAAAACTAGCGA 14188
| ||| | | || | ||||| ||||| || || || || ||||||| || |||
Sbjct 8010 CTCCCAGTGCAGC-AGGTCCTTGGAAAGGTCCACCTCCTCCGCTGTCCAGAAGGAAGCCT 8068
Query 14189 CAGCTTTTTTATACAT 14204
| || || || |||||
Sbjct 8069 CGGCCTTCTTGTACAT 8084
>seq39192
Length=20454
Score = 134 bits (148), Expect = 1e-26
Identities = 359/542 (66%), Gaps = 9/542 (2%)
Strand=Plus/Minus
Query 13642 AGATGTTTAAAAATTAAACACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGT 13701
|| ||||| || || | || ||||| ||||| || | ||||||||||| |||||||
Sbjct 14314 AGGTGTTTGAACATCAGGCAGGCAAAGTCACAGTGCAA-CCCTCATCTCTGTTAATAAGC 14256
Query 13702 TCGTTTGAAAATGTTAATCCTGGCATCAATCCTCGtttttttAACCAAAATATTGCAGCG 13761
|| || || ||||| | || ||||||| ||||| || || | || ||||| | |
Sbjct 14255 TCATTGGAGAATGTGAGGCCAGGCATCAGCCCTCGCTTCTTGAGCCCGAATATCAATGTG 14196
Query 13762 AATGATCCGGAAAAGAATATTCCCTCAACTGCAGCAAACGCTATTAGTCGTTCTCCAAAC 13821
| || || |||||||| ||||| || | |||||||| | | | || |||||| |
Sbjct 14195 GAAGACCCAGAAAAGAAGATTCCTTCCATGGCAGCAAAGGTCACCACACGATCTCCATAG 14136
Query 13822 GATGCTTTTTTGTTTGATATCCATTTTCTAGCCCATTCAGAtttttttttAATAAAATCC 13881
| || | ||||| ||||| || || || | | || || | | || |
Sbjct 14135 GGGGCCTCTTTGTCCCCAATCCAACGCAAGGCTCAGTCTG---TCTTCTTGACACAAGGC 14079
Query 13882 ATTGTTTCGATTGCATTGAATAAATGTTCCTTCTCTTTAG--TACTTGAAATGTATGTAT 13939
|| |||| || | ||||| | ||| ||| || | | |||||| |||| || |
Sbjct 14078 ATCATTTCAATGACGTTGAAGAGGCACTCCCTCTTCTTGGGGTCCTTGAA-TGTAAGTGT 14020
Query 13940 CAATAAGTAAGCTATACATTTCAGAGTGTATGTTTTCTATAGCTATCTGAAAACCATAAA 13999
| || || |||||||||| ||||| ||||||||||| || || | ||| || || || |
Sbjct 14019 CTATGAGGAAGCTATACACCTCAGAATGTATGTTTTCCATGGCAACCTGGAAGCCGTAGA 13960
Query 14000 AACATCTAGCTTCTGACCATTGTACCTCCGAGTAAAATCTTTCTGCCAAGTTTTCATTAA 14059
| || | |||| || || || ||| | ||| | || |||||||| |||| |
Sbjct 13959 AGCAGCAGGCTTTTGTGATCTGAACTTCCTGGCTAAACCGCTCCACCAAGTTTGCATTCA 13900
Query 14060 CAATACCATCACTAGCTGCAAAAAATGCCAATATGTTTTTAATAAAGTATTGCTCTTCAT 14119
|| |||||||| ||||||| || |||| | || ||| ||||| || || |
Sbjct 13899 TGATGCCATCACTCACTGCAAAGAACGCCAGGACGTGGGAAATGAAGTACCTCTTGTCGT 13840
Query 14120 TGTTGAGTTTTTTCCAAT-CGGCTAAATCCTTAGAAAGATCTACTTCATCAACTGTCCAA 14178
|| | | | ||| | | || | | ||| ||||| ||||| || ||| ||||||||
Sbjct 13839 GCTTCATGGTCTCCCAGTGCAGC-AGGTTCTTGGAAAGGTCTACCTCCTCAGCTGTCCAA 13781
Query 14179 AA 14180
||
Sbjct 13780 AA 13779
>seq41434
Length=11022
Score = 125 bits (138), Expect = 7e-24
Identities = 472/733 (64%), Gaps = 12/733 (2%)
Strand=Plus/Minus
Query 13363 CCCATTTTTTGATATTCACTAACTCTTTTTTCAAAAAAGTTAGTTTTACCTTCCAGTGAT 13422
||||| | |||||||| | | ||||| ||||| ||||| || || || ||||||||
Sbjct 7889 CCCATCCTCTGATATTCGCCTTCGCTTTTCTCAAAGAAGTTGGTCTTCCCCTCCAGTGAA 7830
Query 13423 ATATTTTCCATAAAATCGAATGGATTTGTTGACAT--AAACACTTTATCACAACCTAGTT 13480
||||| ||||| || || || | ||| | || | ||| ||| | | |||| | |
Sbjct 7829 ATATTCTCCATGAAGTCAAACCGGTTT-TCAACTTGGAAAGCCTTGCTAA-AACCCAACT 7772
Query 13481 CTAATAATAATCTATCAGCAATAAACTCAATATATTGAGACATTAAATCACAATTCATAC 13540
| | | | || ||||| || || | ||| || || ||| ||| |||||||| |
Sbjct 7771 CCAGCAGGAGCCTGTCAGCCATGAATTGAATGTACTGCTTCATCAAAGTGCAATTCATGC 7712
Query 13541 CTATTAGTTTTACAGGAATTATATTAGTTAAAAATTCTTTTTCTATAGACACAGCCTCGT 13600
| || || || || || | | || | || || | |||||| | | || | |
Sbjct 7711 CAATGAGCTTCACTGGCAAGGCCTCGGTGAGGAACTCCTCTTCTAT---CCTAACCGCAT 7655
Query 13601 TTATAATAATCTTAATAA---TGTCATTAGAAGGAGGATATTTTAGATGTTTAAAAATTA 13657
| ||||| || | | | | | | | ||||| || || ||||| || || |
Sbjct 7654 TAATAATTATTTCATTTACTCTCTGCTCTGAAGGTTTGTACAACAGGTGTTTGAACATCA 7595
Query 13658 AACACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTA 13717
|| ||||| || || ||| |||||||||||| |||||||| ||| | || ||||| |
Sbjct 7594 GGCAGGCAAAGTCCCAGTGATAGCCCTCATCTCTGCTAATAAGCTCGCTGGAGAATGTGA 7535
Query 13718 ATCCTGGCATCAATCCTCGtttttttAACCAAAATATTGCAGCGAATGATCCGGAAAAGA 13777
|| ||||||| ||||| || | | ||| ||||||| | ||| || || |||||||
Sbjct 7534 GACCAGGCATCAGCCCTCGCTTCCTGAGCCAGAATATTGATGTGAAAGACCCAGAAAAGA 7475
Query 13778 ATATTCCCTCAACTGCAGCAAACGCTATTAGTCGTTCTCCAAACGATGCTTTTTTGTTTG 13837
| |||| | || ||||||| || | | | |||||| | | | | |||||
Sbjct 7474 AGGTTCCTTGCACCTCAGCAAAGGCCACCACATGCTCTCCACAGGTGGTCTCTTTGTCCC 7415
Query 13838 ATATCCATTTTCTAGCCCATTCAGAtttttttttAATAAAATCCATTGTTTCGATTGCAT 13897
||||| ||||| | || || || | | || ||| || || ||||
Sbjct 7414 CGATCCAGCGCAAGGCCCAGTATACCTTCTTCTTGACACAAGGCATCAGTTTGAAGGCAT 7355
Query 13898 TGAATA-AATGTTCCTTCTCTTTAGTACTTGAAATGTATGTATCAATAAGTAAGCTATAC 13956
|||| | | | |||| ||| | ||| || || || | | || | ||| |||
Sbjct 7354 TGAAGAGGAACTCCCTTTCCTTGTGATCTT-TGATATAAGTGTTGAGGAGGAGGCTGTAC 7296
Query 13957 ATTTCAGAGTGTATGTTTTCTATAGCTATCTGAAAACCATAAAAACATCTAGCTTCTGAC 14016
|| ||||| ||||| ||||| || || ||||| || || || || || | |||||||
Sbjct 7295 ATCTCAGAATGTATATTTTCCATGGCAATCTGGAAGCCGTAGAAGCAGCAGGCTTCTGTG 7236
Query 14017 CATTGTACCTCCGAGTAAAATCTTTCTGCCAAGTTTTCATTAACAATACCATCACTAGCT 14076
|| || | | | | | || ||||||||||||| ||||| |||| ||| |||
Sbjct 7235 ATCTGAACTTGCTGGCTATACTGCTCCACCAAGTTTTCATTCACAATGCCATTACTTGCT 7176
Query 14077 GCAAAAAATGCCA 14089
|||| ||| |||
Sbjct 7175 ACAAAGAATCCCA 7163
>seq32390
Length=18494
Score = 107 bits (118), Expect = 2e-18
Identities = 95/119 (80%), Gaps = 0/119 (0%)
Strand=Plus/Minus
Query 13684 TCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCTGGCATCAATCCTCGttttttt 13743
|||||||| || || ||||| || ||||| || | ||| ||||| | |||| ||| |||
Sbjct 1993 TCATCTCTGCTGATGAGTTCATTGGAAAAGGTGAGTCCAGGCATAAGACCTCTTTTCTTT 1934
Query 13744 AACCAAAATATTGCAGCGAATGATCCGGAAAAGAATATTCCCTCAACTGCAGCAAACGC 13802
||||| ||||||||||| || ||||| || ||||| ||||| || || |||||||| ||
Sbjct 1933 AACCAGAATATTGCAGCAAAAGATCCCGAGAAGAAAATTCCTTCTACAGCAGCAAAGGC 1875
>seq121209
Length=2218
Score = 105 bits (116), Expect = 6e-18
Identities = 96/121 (79%), Gaps = 0/121 (0%)
Strand=Plus/Plus
Query 13682 CCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCTGGCATCAATCCTCGttttt 13741
|||||||||| |||||||| ||||| || ||||| | || ||||||| ||||| ||||
Sbjct 1711 CCTCATCTCTGCTAATAAGCTCGTTGGAGAATGTGAGGCCGGGCATCAGCCCTCGCTTTT 1770
Query 13742 ttAACCAAAATATTGCAGCGAATGATCCGGAAAAGAATATTCCCTCAACTGCAGCAAACG 13801
| | ||| ||||| | ||||| || || || ||||| ||||| || || ||||||||||
Sbjct 1771 TGAGCCAGAATATCGATGCGAAAGACCCAGAGAAGAAGATTCCTTCCACCGCAGCAAACG 1830
Query 13802 C 13802
|
Sbjct 1831 C 1831
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 477527523353640
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