Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pteronotus_20parnellii_20[genbank_20GCA_5F000465405.1_202013-09-13]
177,401 sequences; 1,960,317,893 total letters
Query= NC_004156.2
Length=231621
Score E
Sequences producing significant alignments: (Bits) Value
seq174480 246 4e-60
seq6383 185 1e-41
seq172910 145 1e-29
seq18562 141 1e-28
>seq174480
Length=6985
Score = 246 bits (272), Expect = 4e-60
Identities = 567/843 (67%), Gaps = 21/843 (2%)
Strand=Plus/Plus
Query 125019 ATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTTGGACGGTCGAAGAGGTCGATCTG 125078
|||||| |||||||||| |||||| |||| ||||| ||||| | || ||| | |||||
Sbjct 760 ATTTGGCAAATGTACAAGAAGGCTGAGGCTTCCTTCTGGACTGCTGAGGAGATTGATCTT 819
Query 125079 TCCAAGGACCTGTACGATTGGGAGACTCGTTTGACTGAAACTGAGCGAGAGTTTATATCG 125138
|||||||| || | || ||| | | || |||||| ||||| || | ||
Sbjct 820 TCCAAGGATCTCCATGACTGGAACAACCGCCTGACTGCCGATGAGCAGTTCTTCGTCTCT 879
Query 125139 CACATTTTGGCCTTCTTTGCCGGCTCCGATGGAATCGTCAACGACAATCT-GTTGACACG 125197
||||| | || || || || | ||| ||||| || |||||||| || || || || ||
Sbjct 880 CACATCCTTGCTTTTTTCGCTGCCTCTGATGGTATTGTCAACGAGAACCTCGTCGAG-CG 938
Query 125198 ATTCTCTCAAGAGTTGACCATTCCAGAGGTGTCGT-GCTTTTACGGATTCCAAATCATGA 125256
|||| | ||| | || || |||| |||| |||| ||||| ||||| |||||||
Sbjct 939 ATTCAGTGGCGAGGTCCAGATCCCCGAGGC-TCGTTGCTTCTACGGCTTCCAGATCATGA 997
Query 125257 TTGAGAACGTGCACTCGGAAATGTACTCTACACTGATTGACATGTACATTCGCGATCC-G 125315
| |||||| | ||||| || | ||||| || ||||||| ||||| || || |
Sbjct 998 TGGAGAACATCCACTCCGAGACCTACTCCCTGCTCATTGACACCTACATCAAGGAGCCCG 1057
Query 125316 CAACGTAAACACATGCTCTTTAACGCAATCGACACGGTGCCGTCTATACGTAAAAAGGCT 125375
| | ||| | ||||||||||| || || || | || | || || || |||||
Sbjct 1058 CCCAGCGAACCTAC-CTCTTTAACGCCATTGAGACCATCCCCTGCATCCGAAAGAAGGCC 1116
Query 125376 CAATGGGTGATTCGGTGGATCGATGACGACAAGTCTTCGTACGCCGACAGACTGGTGGCA 125435
| |||| || || |||||| | || | | || || | ||| | | || || ||
Sbjct 1117 GACTGGGCCATCCGATGGATCCAGGATAAGGACTCCTCATTTGCCCAGCGTCTCGTTGCT 1176
Query 125436 TTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTAGTTTTGCGGCCATCTTTTGGCTCAAG 125495
||||| || || ||||| |||||||| ||| || || | ||||| |||||||||
Sbjct 1177 TTCGCTGCTGTTGAGGGTATCTTCTTCAGTGGTGCCTTCGCCTCTATCTTCTGGCTCAAG 1236
Query 125496 AAGCGCGGACTCATGCCCGGACTGACGCACAGTAACGAGTTTATATCTCGAGACGAGGGC 125555
||||| || ||||||||||| ||||| | |||||| | || ||||| || |||||
Sbjct 1237 AAGCGTGGTCTCATGCCCGGTCTGACCTTCTCCAACGAGCTCATCTCTCGTGATGAGGGT 1296
Query 125556 CTACACTGTGACTTTGCCATTCTACTGTTTCGCAACTATCTGCGTCCCGAGTGCAGATCC 125615
|| ||| |||||||||| || || | ||| | | | | || | | ||
Sbjct 1297 CTTCACACTGACTTTGCCTGCCTCCT------CCACTCT---CACCTCAAGGGTCGTGCC 1347
Query 125616 AGCGATGAAAAGGTCATCAACATTGTAACCGATGCCGTGAGGATAGAACAAGAGTTTCTA 125675
||| | | | | || | || | || |||||||| | ||| || || ||||| ||
Sbjct 1348 AGCAAGCAGATGATCCAGGATATCATTACTGATGCCGTCACGATTGAGCAGGAGTTCCTC 1407
Query 125676 ACCGAATCCCTACCGGTCAGCATGATTGGCATGAACTGCAAGCTAATGTGCGAGTACATA 125735
|| || | || || | | | |||||||||| | || ||| |||||||
Sbjct 1408 ACTGAGGCTCTTCCCTGTGCCCTTCTCGGCATGAACTCTGACCTCATGAAGCAGTACATT 1467
Query 125736 GAGTTTGTGGCAGATCGTCTACTGTACGAGTTGATTGGC--CG-CAAGATTTACAACGCC 125792
||||| || || |||||||| || || | ||||| || ||| ||||||| |||
Sbjct 1468 GAGTTCGTCGCTGATCGTCTCCTTGTCG---CGCTTGGCAACGAGAAGGTTTACAAGGCC 1524
Query 125793 AAGAATCCCTTTGATTTCATGACCAGCATATCACTAGAGGGTAAGACCAACTTTTTCGAG 125852
| || ||||| || |||||| | ||| || || | || ||||||||||| ||||||
Sbjct 1525 ACCAACCCCTTCGACTTCATGGAGAACATCTCCCTTGGTGGCAAGACCAACTTCTTCGAG 1584
Query 125853 AAG 125855
|||
Sbjct 1585 AAG 1587
>seq6383
Length=23588
Score = 185 bits (204), Expect = 1e-41
Identities = 569/873 (65%), Gaps = 18/873 (2%)
Strand=Plus/Minus
Query 124998 TTTCCCATCAGGTATCATGACATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTTGG 125057
|| |||||| ||| || ||||| ||| | |||||||| ||||| |||| ||||| |||
Sbjct 8114 TTCCCCATCGAGTACCACGACATCTGGCAGATGTACAAGAAGGCCGAGGCTTCCTTCTGG 8055
Query 125058 ACGGTCGAAGAGGTCGATCTGTCCAAGGACCTGTACGATTGGGAGACTCGTTTGACTGAA 125117
|| | || ||||| || || |||||||||||| | |||||||| | ||| ||
Sbjct 8054 ACAGCGGAGGAGGTGGACCTTTCCAAGGACCTGCTGCACTGGGAGACCC---TGAAGGAC 7998
Query 125118 ACTGAGCGAGAGTTTATATCGCACATTTTGGCCTTCTTTGCCGGCTCCGATGGAATCGTC 125177
||| | | || || |||||| | |||| |||||||| | | |||||| |||||
Sbjct 7997 GACGAGAGGTACTTCATTTCGCACGTCCTGGCGTTCTTTGCAGCCAGCGATGGCATCGTG 7938
Query 125178 AACGACAATCTGTTGACACGATTCTCTCAAG-AGTTGACCATTCCAGAGGTGTCGTGCTT 125236
|| || || || || || ||| || | |||| | || |||| | |||||
Sbjct 7937 AATGAAAACTTGGTGGAGCGGTTCAGCCAGGAAGTTCA-GATCACAGAAGCCCGCTGCTT 7879
Query 125237 TTACGGATTCCAAATCATGATTGAGAACGTGCACTCGGAAATGTACTCTACACTGATTGA 125296
|| || ||||| ||| || || ||| | || || || |||||| || || ||
Sbjct 7878 CTATGGCTTCCAGATCGCCATGGAAAACATACATTCTGAGATGTACAGCCTCCTCATCGA 7819
Query 125297 CATGTACATTCGCGATCCGCAACGTAAACACATGCTCTTTAACGCAATCGACACGGTGCC 125356
|| ||||| || || || | | | ||||| || || ||||| | | ||||
Sbjct 7818 CACTTACATCAAAGACCCCAAAGAGAGGGAGTTCCTCTTCAATGCCATCGAGAAGATGCC 7759
Query 125357 GTCTATACGTAAAAAGGCTCAATGGGTGATTCGGTGGATCGATGACGACAAGTCTTCGTA 125416
| | | || ||||| | |||| | || ||||| | ||| | || | | ||
Sbjct 7758 TTGTGTCAAGAAGAAGGCAGACTGGGCCTTGCGTTGGATTGGGGACAAAGAGGCCACCTA 7699
Query 125417 CGCCGACAGACTGGTGGCATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTAGTTTTGC 125476
| || | ||||||| || || | || || || |||||||| || || ||| |
Sbjct 7698 TGGAGAGCGCGTGGTGGCGTTTGCTGAGGTGGAAGGAATCTTCTTCTCTGGGTCTTTCAC 7639
Query 125477 GGCCATCTTTTGGCTCAAGAAGCGCGGACTCATGCCCGGACTGACGCACAGTAACGAGTT 125536
| || || |||||||||||||| || || |||||||| || || | | |||| |
Sbjct 7638 ATCGATATTCTGGCTCAAGAAGCGAGGGCTGATGCCCGGCCTCACATTCTCCAGCGAGCT 7579
Query 125537 TATATCTCGAGACGAGGGCCTACACTGTGACTTTGCCATTCTACTGTTTCGCAACTATCT 125596
||| |||| |||||| | ||||||||||||||| || |||| ||| | ||
Sbjct 7578 TATTAGCAGAGATGAGGGCTTGCACTGTGACTTTGCCTGCCTGATGTT---CAAACACCT 7522
Query 125597 GCGTCCCGA--GTGCAGATCCAGCGATGAAAAGGTCATCAACATTGTAACCGATGCCGTG 125654
| | | | | | || ||| | | ||||| |||| ||| | |||| |
Sbjct 7521 GGCACACAAACCTTCGGA-GCAG-AAAGTAAAGGAAATCATCAT------CAATGCATTT 7470
Query 125655 AGGATAGAACAAGAGTTTCTAACCGAATCCCTACCGGTCAGCATGATTGGCATGAACTGC 125714
| ||||||||| ||||| || || || || | || || | | ||||| ||||| ||
Sbjct 7469 AAGATAGAACAGGAGTTCCTCACGGAGGCCTTGCCAGTGAAGCTCATTGGGATGAATTGT 7410
Query 125715 AAGCTAATGTGCGAGTACATAGAGTTTGTGGCAGATCGTCTACTGTACGAGTTGATTGGC 125774
| | ||| ||||||| || |||||||| || | || ||| ||| || |
Sbjct 7409 ACTTTGATGAAACAGTACATTGAATTTGTGGCCGACAGGCTCCTGCTGGAGCTGGGTTTT 7350
Query 125775 CGCAAGATTTACAACGCCAAGAATCCCTTTGATTTCATGACCAGCATATCACTAGAGGGT 125834
||||| || | | | || || ||||| |||||| | ||| |||||||| ||
Sbjct 7349 AGCAAGGCTTTCCGAGTGGAAAACCCGTTTGACTTCATGGAGAACATCTCACTAGAAGGG 7290
Query 125835 AAGACCAACTTTTTCGAGAAGAAGGTCAGCGAG 125867
||||||||||| || |||||||| || |||||
Sbjct 7289 AAGACCAACTTCTTTGAGAAGAAAGTAGGCGAG 7257
>seq172910
Length=5564
Score = 145 bits (160), Expect = 1e-29
Identities = 303/446 (68%), Gaps = 4/446 (1%)
Strand=Plus/Minus
Query 96876 CAGGGCGGCAATAAACGGCCAGGCGCTATAGCCGTCTACTTGGAACCTTGGCACGCGGAC 96935
||||| ||||| || || || || ||| | ||| ||||| | || ||||||||| | ||
Sbjct 3431 CAGGGTGGCAACAAGCGACCCGGTGCTTTTGCCATCTACCTCGAGCCTTGGCACTCTGAT 3372
Query 96936 GTTTTTGACTTTATCGAGATGCGCAAAAACTCTGGCTTTGAAGAGGCACGAGCCAGGGAC 96995
|| || || || | || | || || ||| || || |||| || ||| | |||
Sbjct 3371 GTCTTCGAGTTCCTTGATCTCCGTAAGAACCACGGTAAAGAGGAGGTCCGTGCCCGTGAC 3312
Query 96996 TTGTTTTATGCACTCTGGGTGCCAGATTTGTTCATGAAGCGCGTCAACGACGGTGGCTAC 97055
| || || || ||| | || ||| | ||||||||||| || | | ||| ||
Sbjct 3311 CTTTTCCTCGCCCTTTGGATCCCTGATCTTTTCATGAAGCGTGTTGAAAAGAACGGCGAC 3252
Query 97056 TGGAGCCTAATGTGCCCCGACTCGTCACCCGGTCTGTCCGATTGCTGGGGCGAAGAGTTT 97115
|||| || ||||||||| || || || || || |||| |||| || || |||||
Sbjct 3251 TGGACGCTGATGTGCCCCAACGAGTGCCCTGGCCTCGCCGACTGCTACGGAGAGGAGTTC 3192
Query 97116 GAGGCCAAGTACACGGCCTACGAGCAAGAGGGCC-GATACGTGAGACGAGTCGATGCACG 97174
||||| |||| |||||| | |||||| | || |||| | || | || |
Sbjct 3191 GAGGCTCTGTACGAAAAGTACGAGAAGGAGGGCAAGGGTCGCAAGACTA-TCAAGGCTCA 3133
Query 97175 AGAACTGTGGAAGGCCAT-CGTGACGGCTCAGGTAGAGACTGGAACTCCGTACATTCTCT 97233
|||| ||| | ||||| | ||| ||| ||| ||||| |||| || | ||| ||||
Sbjct 3132 GAAACTTTGGTACGCCATTCTTGA-GGCCCAGACTGAGACCGGAAACCCATTCATGCTCT 3074
Query 97234 ACAAGGATACCGTGAATCGCAACAGCAACCAACGCCACTTGGGCACCATCAAGGGCTCCA 97293
|||||||| || || ||||| ||||||||| || | || |||||| ||||||
Sbjct 3073 ACAAGGATGCCTGCAACCGCAAGAGCAACCAAAAGAACCTCGGTACCATCCGAAGCTCCA 3014
Query 97294 ATCTGTGCACGGAAATTGTAGAGTAC 97319
| |||||||| |||||| | ||||||
Sbjct 3013 ACCTGTGCACTGAAATTATTGAGTAC 2988
>seq18562
Length=18598
Score = 141 bits (156), Expect = 1e-28
Identities = 433/658 (66%), Gaps = 21/658 (3%)
Strand=Plus/Plus
Query 69896 CCTCTGTTGACGACCAAGACTGTCTTTGTCAAGGGCGTCATCGAGGAGCTCTTGTGGATG 69955
|||||| |||| ||||| ||| || ||||| | | |||||||| ||||| |
Sbjct 12255 CCTCTGCTGACAACCAAATGTGTGTTCTGGAAGGGGATTTTGGAGGAGCTGCTGTGGTTT 12314
Query 69956 ATTTCCGGATCGACCAATGCCAAAGAGCTG--AGCCGAAAGGGTGTACACATTTGGAGCG 70013
|| |||||| || ||||| ||||| ||| | || | ||| || | || ||| |
Sbjct 12315 ATCAACGGATCCACAAATGCTAAAGAACTGTCAACC--AGGGGAGTGAAAATCTGGGATG 12372
Query 70014 GCAACAGTAGTCGAAGCGTTTTGGATTCGCTCGGCTTCACCGACAGACAAGAGGGCGATC 70073
||| | ||| | | ||||| || || ||| | |||| ||||||| |||
Sbjct 12373 CCAATGGGTCTCGTGACTTCCTGGATGGCCTTGGATTCTCTAGCAGAAAAGAGGGGGATT 12432
Query 70074 TGGGGCCAGTGTACGGATTCCAGTGGAGGCACTCGGGCACCAAGTATGTAGACTGCGAGA 70133
| || ||||| || || || ||||||||||| | || | | || | | ||
Sbjct 12433 TAGGCCCAGTTTA-GGCTTTCAGTGGAGGCATTTTGGGGCAGAATACAAAAATATGGATT 12491
Query 70134 CAGACTATTCGGGTCAGGGTGTTGATCAATTGCAGACAATCATTGACACTCTCAAGACCA 70193
|||| ||||| ||||| || || | ||| |||| | | ||||||| |||| ||||
Sbjct 12492 CAGATTATTCAGGTCAAGGAGTGGGCCAACTGCAAAAGGTGATTGACATGATCAAAACCA 12551
Query 70194 ATCCAACAGATAGGAGGATCGTAATGTGCTCATGGAATCCTGCAGATTTGCACCAAATGG 70253
| || || || || || ||| | |||| | |||||||| |||| | | ||||
Sbjct 12552 AACCTACTGACAGAAGAATCATTCTGTGTGCTTGGAATCCAAAAGATCTTCCTTTCATGG 12611
Query 70254 CACTACCACCGTGTCACTGT--TTGGCTCAGTTTTACTCGT--ACG------ATGGCAAA 70303
| ||||| || || || || || || ||||| ||| || ||| |||| |
Sbjct 12612 CCCTACCTCCATGCCA-TGCCCTTTGC-CAGTTCTACGTGTCTACGTGATGAATGGGGAG 12669
Query 70304 TTGTCATGCTTAATGTATCAGAGGAGTGCCGACATGGGCCTCGGTGTACCCTTTAACATT 70363
|||| ||| | || |||||| || ||||||||||| || | |||||| |||||
Sbjct 12670 CTGTCCTGCCAGCTATACCAGAGGTCAGCAGACATGGGCCTGGGCGCACCCTTCAACATC 12729
Query 70364 GCAAGCTATTCTATGTTGACGCACATGATTGCTCACATTACCGGCCTGAAAGCGCA--CG 70421
| ||||| || || | || |||||||| || ||||| | ||||| ||||| || |
Sbjct 12730 TCCAGCTACTCCCTGCTCACCCACATGATCGCACACATCATGGGCCT-AAAGC-CAGGTG 12787
Query 70422 AGTTCGTACACACCATTGGCGACGCTCACGTGTATTTAAATCACATCGAGCCATTAAAGG 70481
| || |||||||| | || || || ||||| || | ||||| | ||||| | ||
Sbjct 12788 ACTTTGTACACACTTTGGGAGATGCACACGTTTACCTGAATCATACTGAGCCGCTGAAAC 12847
Query 70482 TGCAACTCGAACGGGAGCCGAGACCTTTTCCCAAGCTGGAGTTTGCTCGTAAAGTTGA 70539
|||| || | | || || |||||||| | ||||| | | ||| ||||||||
Sbjct 12848 TGCAGCTTCAGTGAGAACCAAGACCTTTCCTGAAGCTCAAAATCCTTCGAAAAGTTGA 12905
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 739415891960760
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