Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pteronotus_20parnellii_20[genbank_20GCA_5F000465405.1_202013-09-13] 177,401 sequences; 1,960,317,893 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq174480 246 4e-60 seq6383 185 1e-41 seq172910 145 1e-29 seq18562 141 1e-28 >seq174480 Length=6985 Score = 246 bits (272), Expect = 4e-60 Identities = 567/843 (67%), Gaps = 21/843 (2%) Strand=Plus/Plus Query 125019 ATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTTGGACGGTCGAAGAGGTCGATCTG 125078 |||||| |||||||||| |||||| |||| ||||| ||||| | || ||| | ||||| Sbjct 760 ATTTGGCAAATGTACAAGAAGGCTGAGGCTTCCTTCTGGACTGCTGAGGAGATTGATCTT 819 Query 125079 TCCAAGGACCTGTACGATTGGGAGACTCGTTTGACTGAAACTGAGCGAGAGTTTATATCG 125138 |||||||| || | || ||| | | || |||||| ||||| || | || Sbjct 820 TCCAAGGATCTCCATGACTGGAACAACCGCCTGACTGCCGATGAGCAGTTCTTCGTCTCT 879 Query 125139 CACATTTTGGCCTTCTTTGCCGGCTCCGATGGAATCGTCAACGACAATCT-GTTGACACG 125197 ||||| | || || || || | ||| ||||| || |||||||| || || || || || Sbjct 880 CACATCCTTGCTTTTTTCGCTGCCTCTGATGGTATTGTCAACGAGAACCTCGTCGAG-CG 938 Query 125198 ATTCTCTCAAGAGTTGACCATTCCAGAGGTGTCGT-GCTTTTACGGATTCCAAATCATGA 125256 |||| | ||| | || || |||| |||| |||| ||||| ||||| ||||||| Sbjct 939 ATTCAGTGGCGAGGTCCAGATCCCCGAGGC-TCGTTGCTTCTACGGCTTCCAGATCATGA 997 Query 125257 TTGAGAACGTGCACTCGGAAATGTACTCTACACTGATTGACATGTACATTCGCGATCC-G 125315 | |||||| | ||||| || | ||||| || ||||||| ||||| || || | Sbjct 998 TGGAGAACATCCACTCCGAGACCTACTCCCTGCTCATTGACACCTACATCAAGGAGCCCG 1057 Query 125316 CAACGTAAACACATGCTCTTTAACGCAATCGACACGGTGCCGTCTATACGTAAAAAGGCT 125375 | | ||| | ||||||||||| || || || | || | || || || ||||| Sbjct 1058 CCCAGCGAACCTAC-CTCTTTAACGCCATTGAGACCATCCCCTGCATCCGAAAGAAGGCC 1116 Query 125376 CAATGGGTGATTCGGTGGATCGATGACGACAAGTCTTCGTACGCCGACAGACTGGTGGCA 125435 | |||| || || |||||| | || | | || || | ||| | | || || || Sbjct 1117 GACTGGGCCATCCGATGGATCCAGGATAAGGACTCCTCATTTGCCCAGCGTCTCGTTGCT 1176 Query 125436 TTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTAGTTTTGCGGCCATCTTTTGGCTCAAG 125495 ||||| || || ||||| |||||||| ||| || || | ||||| ||||||||| Sbjct 1177 TTCGCTGCTGTTGAGGGTATCTTCTTCAGTGGTGCCTTCGCCTCTATCTTCTGGCTCAAG 1236 Query 125496 AAGCGCGGACTCATGCCCGGACTGACGCACAGTAACGAGTTTATATCTCGAGACGAGGGC 125555 ||||| || ||||||||||| ||||| | |||||| | || ||||| || ||||| Sbjct 1237 AAGCGTGGTCTCATGCCCGGTCTGACCTTCTCCAACGAGCTCATCTCTCGTGATGAGGGT 1296 Query 125556 CTACACTGTGACTTTGCCATTCTACTGTTTCGCAACTATCTGCGTCCCGAGTGCAGATCC 125615 || ||| |||||||||| || || | ||| | | | | || | | || Sbjct 1297 CTTCACACTGACTTTGCCTGCCTCCT------CCACTCT---CACCTCAAGGGTCGTGCC 1347 Query 125616 AGCGATGAAAAGGTCATCAACATTGTAACCGATGCCGTGAGGATAGAACAAGAGTTTCTA 125675 ||| | | | | || | || | || |||||||| | ||| || || ||||| || Sbjct 1348 AGCAAGCAGATGATCCAGGATATCATTACTGATGCCGTCACGATTGAGCAGGAGTTCCTC 1407 Query 125676 ACCGAATCCCTACCGGTCAGCATGATTGGCATGAACTGCAAGCTAATGTGCGAGTACATA 125735 || || | || || | | | |||||||||| | || ||| ||||||| Sbjct 1408 ACTGAGGCTCTTCCCTGTGCCCTTCTCGGCATGAACTCTGACCTCATGAAGCAGTACATT 1467 Query 125736 GAGTTTGTGGCAGATCGTCTACTGTACGAGTTGATTGGC--CG-CAAGATTTACAACGCC 125792 ||||| || || |||||||| || || | ||||| || ||| ||||||| ||| Sbjct 1468 GAGTTCGTCGCTGATCGTCTCCTTGTCG---CGCTTGGCAACGAGAAGGTTTACAAGGCC 1524 Query 125793 AAGAATCCCTTTGATTTCATGACCAGCATATCACTAGAGGGTAAGACCAACTTTTTCGAG 125852 | || ||||| || |||||| | ||| || || | || ||||||||||| |||||| Sbjct 1525 ACCAACCCCTTCGACTTCATGGAGAACATCTCCCTTGGTGGCAAGACCAACTTCTTCGAG 1584 Query 125853 AAG 125855 ||| Sbjct 1585 AAG 1587 >seq6383 Length=23588 Score = 185 bits (204), Expect = 1e-41 Identities = 569/873 (65%), Gaps = 18/873 (2%) Strand=Plus/Minus Query 124998 TTTCCCATCAGGTATCATGACATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTTGG 125057 || |||||| ||| || ||||| ||| | |||||||| ||||| |||| ||||| ||| Sbjct 8114 TTCCCCATCGAGTACCACGACATCTGGCAGATGTACAAGAAGGCCGAGGCTTCCTTCTGG 8055 Query 125058 ACGGTCGAAGAGGTCGATCTGTCCAAGGACCTGTACGATTGGGAGACTCGTTTGACTGAA 125117 || | || ||||| || || |||||||||||| | |||||||| | ||| || Sbjct 8054 ACAGCGGAGGAGGTGGACCTTTCCAAGGACCTGCTGCACTGGGAGACCC---TGAAGGAC 7998 Query 125118 ACTGAGCGAGAGTTTATATCGCACATTTTGGCCTTCTTTGCCGGCTCCGATGGAATCGTC 125177 ||| | | || || |||||| | |||| |||||||| | | |||||| ||||| Sbjct 7997 GACGAGAGGTACTTCATTTCGCACGTCCTGGCGTTCTTTGCAGCCAGCGATGGCATCGTG 7938 Query 125178 AACGACAATCTGTTGACACGATTCTCTCAAG-AGTTGACCATTCCAGAGGTGTCGTGCTT 125236 || || || || || || ||| || | |||| | || |||| | ||||| Sbjct 7937 AATGAAAACTTGGTGGAGCGGTTCAGCCAGGAAGTTCA-GATCACAGAAGCCCGCTGCTT 7879 Query 125237 TTACGGATTCCAAATCATGATTGAGAACGTGCACTCGGAAATGTACTCTACACTGATTGA 125296 || || ||||| ||| || || ||| | || || || |||||| || || || Sbjct 7878 CTATGGCTTCCAGATCGCCATGGAAAACATACATTCTGAGATGTACAGCCTCCTCATCGA 7819 Query 125297 CATGTACATTCGCGATCCGCAACGTAAACACATGCTCTTTAACGCAATCGACACGGTGCC 125356 || ||||| || || || | | | ||||| || || ||||| | | |||| Sbjct 7818 CACTTACATCAAAGACCCCAAAGAGAGGGAGTTCCTCTTCAATGCCATCGAGAAGATGCC 7759 Query 125357 GTCTATACGTAAAAAGGCTCAATGGGTGATTCGGTGGATCGATGACGACAAGTCTTCGTA 125416 | | | || ||||| | |||| | || ||||| | ||| | || | | || Sbjct 7758 TTGTGTCAAGAAGAAGGCAGACTGGGCCTTGCGTTGGATTGGGGACAAAGAGGCCACCTA 7699 Query 125417 CGCCGACAGACTGGTGGCATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTAGTTTTGC 125476 | || | ||||||| || || | || || || |||||||| || || ||| | Sbjct 7698 TGGAGAGCGCGTGGTGGCGTTTGCTGAGGTGGAAGGAATCTTCTTCTCTGGGTCTTTCAC 7639 Query 125477 GGCCATCTTTTGGCTCAAGAAGCGCGGACTCATGCCCGGACTGACGCACAGTAACGAGTT 125536 | || || |||||||||||||| || || |||||||| || || | | |||| | Sbjct 7638 ATCGATATTCTGGCTCAAGAAGCGAGGGCTGATGCCCGGCCTCACATTCTCCAGCGAGCT 7579 Query 125537 TATATCTCGAGACGAGGGCCTACACTGTGACTTTGCCATTCTACTGTTTCGCAACTATCT 125596 ||| |||| |||||| | ||||||||||||||| || |||| ||| | || Sbjct 7578 TATTAGCAGAGATGAGGGCTTGCACTGTGACTTTGCCTGCCTGATGTT---CAAACACCT 7522 Query 125597 GCGTCCCGA--GTGCAGATCCAGCGATGAAAAGGTCATCAACATTGTAACCGATGCCGTG 125654 | | | | | | || ||| | | ||||| |||| ||| | |||| | Sbjct 7521 GGCACACAAACCTTCGGA-GCAG-AAAGTAAAGGAAATCATCAT------CAATGCATTT 7470 Query 125655 AGGATAGAACAAGAGTTTCTAACCGAATCCCTACCGGTCAGCATGATTGGCATGAACTGC 125714 | ||||||||| ||||| || || || || | || || | | ||||| ||||| || Sbjct 7469 AAGATAGAACAGGAGTTCCTCACGGAGGCCTTGCCAGTGAAGCTCATTGGGATGAATTGT 7410 Query 125715 AAGCTAATGTGCGAGTACATAGAGTTTGTGGCAGATCGTCTACTGTACGAGTTGATTGGC 125774 | | ||| ||||||| || |||||||| || | || ||| ||| || | Sbjct 7409 ACTTTGATGAAACAGTACATTGAATTTGTGGCCGACAGGCTCCTGCTGGAGCTGGGTTTT 7350 Query 125775 CGCAAGATTTACAACGCCAAGAATCCCTTTGATTTCATGACCAGCATATCACTAGAGGGT 125834 ||||| || | | | || || ||||| |||||| | ||| |||||||| || Sbjct 7349 AGCAAGGCTTTCCGAGTGGAAAACCCGTTTGACTTCATGGAGAACATCTCACTAGAAGGG 7290 Query 125835 AAGACCAACTTTTTCGAGAAGAAGGTCAGCGAG 125867 ||||||||||| || |||||||| || ||||| Sbjct 7289 AAGACCAACTTCTTTGAGAAGAAAGTAGGCGAG 7257 >seq172910 Length=5564 Score = 145 bits (160), Expect = 1e-29 Identities = 303/446 (68%), Gaps = 4/446 (1%) Strand=Plus/Minus Query 96876 CAGGGCGGCAATAAACGGCCAGGCGCTATAGCCGTCTACTTGGAACCTTGGCACGCGGAC 96935 ||||| ||||| || || || || ||| | ||| ||||| | || ||||||||| | || Sbjct 3431 CAGGGTGGCAACAAGCGACCCGGTGCTTTTGCCATCTACCTCGAGCCTTGGCACTCTGAT 3372 Query 96936 GTTTTTGACTTTATCGAGATGCGCAAAAACTCTGGCTTTGAAGAGGCACGAGCCAGGGAC 96995 || || || || | || | || || ||| || || |||| || ||| | ||| Sbjct 3371 GTCTTCGAGTTCCTTGATCTCCGTAAGAACCACGGTAAAGAGGAGGTCCGTGCCCGTGAC 3312 Query 96996 TTGTTTTATGCACTCTGGGTGCCAGATTTGTTCATGAAGCGCGTCAACGACGGTGGCTAC 97055 | || || || ||| | || ||| | ||||||||||| || | | ||| || Sbjct 3311 CTTTTCCTCGCCCTTTGGATCCCTGATCTTTTCATGAAGCGTGTTGAAAAGAACGGCGAC 3252 Query 97056 TGGAGCCTAATGTGCCCCGACTCGTCACCCGGTCTGTCCGATTGCTGGGGCGAAGAGTTT 97115 |||| || ||||||||| || || || || || |||| |||| || || ||||| Sbjct 3251 TGGACGCTGATGTGCCCCAACGAGTGCCCTGGCCTCGCCGACTGCTACGGAGAGGAGTTC 3192 Query 97116 GAGGCCAAGTACACGGCCTACGAGCAAGAGGGCC-GATACGTGAGACGAGTCGATGCACG 97174 ||||| |||| |||||| | |||||| | || |||| | || | || | Sbjct 3191 GAGGCTCTGTACGAAAAGTACGAGAAGGAGGGCAAGGGTCGCAAGACTA-TCAAGGCTCA 3133 Query 97175 AGAACTGTGGAAGGCCAT-CGTGACGGCTCAGGTAGAGACTGGAACTCCGTACATTCTCT 97233 |||| ||| | ||||| | ||| ||| ||| ||||| |||| || | ||| |||| Sbjct 3132 GAAACTTTGGTACGCCATTCTTGA-GGCCCAGACTGAGACCGGAAACCCATTCATGCTCT 3074 Query 97234 ACAAGGATACCGTGAATCGCAACAGCAACCAACGCCACTTGGGCACCATCAAGGGCTCCA 97293 |||||||| || || ||||| ||||||||| || | || |||||| |||||| Sbjct 3073 ACAAGGATGCCTGCAACCGCAAGAGCAACCAAAAGAACCTCGGTACCATCCGAAGCTCCA 3014 Query 97294 ATCTGTGCACGGAAATTGTAGAGTAC 97319 | |||||||| |||||| | |||||| Sbjct 3013 ACCTGTGCACTGAAATTATTGAGTAC 2988 >seq18562 Length=18598 Score = 141 bits (156), Expect = 1e-28 Identities = 433/658 (66%), Gaps = 21/658 (3%) Strand=Plus/Plus Query 69896 CCTCTGTTGACGACCAAGACTGTCTTTGTCAAGGGCGTCATCGAGGAGCTCTTGTGGATG 69955 |||||| |||| ||||| ||| || ||||| | | |||||||| ||||| | Sbjct 12255 CCTCTGCTGACAACCAAATGTGTGTTCTGGAAGGGGATTTTGGAGGAGCTGCTGTGGTTT 12314 Query 69956 ATTTCCGGATCGACCAATGCCAAAGAGCTG--AGCCGAAAGGGTGTACACATTTGGAGCG 70013 || |||||| || ||||| ||||| ||| | || | ||| || | || ||| | Sbjct 12315 ATCAACGGATCCACAAATGCTAAAGAACTGTCAACC--AGGGGAGTGAAAATCTGGGATG 12372 Query 70014 GCAACAGTAGTCGAAGCGTTTTGGATTCGCTCGGCTTCACCGACAGACAAGAGGGCGATC 70073 ||| | ||| | | ||||| || || ||| | |||| ||||||| ||| Sbjct 12373 CCAATGGGTCTCGTGACTTCCTGGATGGCCTTGGATTCTCTAGCAGAAAAGAGGGGGATT 12432 Query 70074 TGGGGCCAGTGTACGGATTCCAGTGGAGGCACTCGGGCACCAAGTATGTAGACTGCGAGA 70133 | || ||||| || || || ||||||||||| | || | | || | | || Sbjct 12433 TAGGCCCAGTTTA-GGCTTTCAGTGGAGGCATTTTGGGGCAGAATACAAAAATATGGATT 12491 Query 70134 CAGACTATTCGGGTCAGGGTGTTGATCAATTGCAGACAATCATTGACACTCTCAAGACCA 70193 |||| ||||| ||||| || || | ||| |||| | | ||||||| |||| |||| Sbjct 12492 CAGATTATTCAGGTCAAGGAGTGGGCCAACTGCAAAAGGTGATTGACATGATCAAAACCA 12551 Query 70194 ATCCAACAGATAGGAGGATCGTAATGTGCTCATGGAATCCTGCAGATTTGCACCAAATGG 70253 | || || || || || ||| | |||| | |||||||| |||| | | |||| Sbjct 12552 AACCTACTGACAGAAGAATCATTCTGTGTGCTTGGAATCCAAAAGATCTTCCTTTCATGG 12611 Query 70254 CACTACCACCGTGTCACTGT--TTGGCTCAGTTTTACTCGT--ACG------ATGGCAAA 70303 | ||||| || || || || || || ||||| ||| || ||| |||| | Sbjct 12612 CCCTACCTCCATGCCA-TGCCCTTTGC-CAGTTCTACGTGTCTACGTGATGAATGGGGAG 12669 Query 70304 TTGTCATGCTTAATGTATCAGAGGAGTGCCGACATGGGCCTCGGTGTACCCTTTAACATT 70363 |||| ||| | || |||||| || ||||||||||| || | |||||| ||||| Sbjct 12670 CTGTCCTGCCAGCTATACCAGAGGTCAGCAGACATGGGCCTGGGCGCACCCTTCAACATC 12729 Query 70364 GCAAGCTATTCTATGTTGACGCACATGATTGCTCACATTACCGGCCTGAAAGCGCA--CG 70421 | ||||| || || | || |||||||| || ||||| | ||||| ||||| || | Sbjct 12730 TCCAGCTACTCCCTGCTCACCCACATGATCGCACACATCATGGGCCT-AAAGC-CAGGTG 12787 Query 70422 AGTTCGTACACACCATTGGCGACGCTCACGTGTATTTAAATCACATCGAGCCATTAAAGG 70481 | || |||||||| | || || || ||||| || | ||||| | ||||| | || Sbjct 12788 ACTTTGTACACACTTTGGGAGATGCACACGTTTACCTGAATCATACTGAGCCGCTGAAAC 12847 Query 70482 TGCAACTCGAACGGGAGCCGAGACCTTTTCCCAAGCTGGAGTTTGCTCGTAAAGTTGA 70539 |||| || | | || || |||||||| | ||||| | | ||| |||||||| Sbjct 12848 TGCAGCTTCAGTGAGAACCAAGACCTTTCCTGAAGCTCAAAATCCTTCGAAAAGTTGA 12905 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 739415891960760