Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pteronotus_20parnellii_20[genbank_20GCA_5F000465405.1_202013-09-13]
177,401 sequences; 1,960,317,893 total letters
Query= NC_004333.2
Length=48247
Score E
Sequences producing significant alignments: (Bits) Value
seq87209 105 2e-18
>seq87209
Length=1003
Score = 105 bits (116), Expect = 2e-18
Identities = 173/245 (71%), Gaps = 12/245 (5%)
Strand=Plus/Minus
Query 9882 CAGGAAAGGTCGGACAGCTCATCCGATTCGATTAGGTCGATCGCGTGACCGTCCCACACG 9941
||||| || | | |||||| |||||| ||| ||||||||| || |||||| ||
Sbjct 337 CAGGACAGCCCCGCCAGCTCCCCCGATTGGATGTAGTCGATCGCCTGCTTGTCCCAGACC 278
Query 9942 AGCAGGTCGCCGCGCAGGTGTTTGCCGT---CGAACCGCACGTTGTGTACCGAACCGCCG 9998
|||||||| ||| ||| ||||||| | |||| || | ||| || |||||||
Sbjct 277 AGCAGGTC--CGC-CAGCAGTTTGCCATTTTCGAAACGGGCATTGCCGACGCTACCGCCG 221
Query 9999 ACGTACTCTTTGCGCGGGTTGTCGGCCGTCTGCGCGACGTGCTTGATCATGAGGGGCAGC 10058
| ||| || |||||||| | |||||||||||| |||| |||| ||||| | || ||
Sbjct 220 ATGTATTCCTTGCGCGGTTCGTCGGCCGTCTGGGCGATGTGCCGAATCATCAACGGTAGA 161
Query 10059 CCCTCGAACGACTTCAGCGTGTCGGGATGCCCGAGCTCGGTCGGATCGCGGTACAGGTCG 10118
|| | ||| | || ||| || | | | ||||||| || |||||||| |||||
Sbjct 160 CCGTTGAAGG---TCGGCGCAGCGCGTT---CAAGCTCGGCGGGGTCGCGGTAGAGGTCA 107
Query 10119 TAGAC 10123
|||||
Sbjct 106 TAGAC 102
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 153943811657258
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |