Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pteronotus_20parnellii_20[genbank_20GCA_5F000465405.1_202013-09-13]
177,401 sequences; 1,960,317,893 total letters
Query= NC_005135.1
Length=173591
Score E
Sequences producing significant alignments: (Bits) Value
seq177174 89.7 6e-13
>seq177174
Length=16738
Score = 89.7 bits (98), Expect = 6e-13
Identities = 181/265 (68%), Gaps = 8/265 (3%)
Strand=Plus/Plus
Query 6913 CTTGCCCGAAGCATTCGCTTTGTGCCCGTGAGTGAGATGGCCGCCGCAGTCCAAGGACAT 6972
||||||||| || ||| | ||| || || ||||| ||||||||| | ||| | |||
Sbjct 11935 CTTGCCCGAGGCGTTCACCTTGGCGCCATGGGTGAGGTGGCCGCCGTGGGCCAGGCTCAT 11994
Query 6973 AGCGAGAACCGAATCACCCGGCTTCAGGAGTGCTTGGTAAACTGCCTGGTTTGCTTGTGA 7032
|||| | | || ||||||| ||| || || ||| || |||||||| || || ||
Sbjct 11995 GCCGAGGATGGTGTCGCCCGGCTGCAGCAGCGCGAAGTACACGGCCTGGTTGGCCTGCGA 12054
Query 7033 ACCGGAATGAGGTTGAACGTTTGCGAAATTGCAACTAAACAGTT-CTTTAGCACGCTCAA 7091
||| || || || ||||| || | | | | ||||| | ||| || || || |
Sbjct 12055 GCCGCTGTGTGGCTGCACGTTCGCATAGTCGGCGCCGAACAGCTGCTTGAGG-CGGTCGA 12113
Query 7092 TTGCCAGGTTCTCG---ATTTCATCGGCTTTTACGCAGCCGCCATAATACCGTTTGCCCG 7148
| ||||| | |||| || || || | |||| || || || || || |||||||
Sbjct 12114 TCGCCAGCTGCTCGGCGATGTCCACGTACT---CGCAACCACCGTAGTAGCGCTTGCCCG 12170
Query 7149 GATATCCCTCAGCATACTTGTTGGT 7173
|||| || || || |||||||||||
Sbjct 12171 GATAGCCTTCGGCGTACTTGTTGGT 12195
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 554131675161960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |