Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pteronotus_20parnellii_20[genbank_20GCA_5F000465405.1_202013-09-13] 177,401 sequences; 1,960,317,893 total letters Query= NC_005135.1 Length=173591 Score E Sequences producing significant alignments: (Bits) Value seq177174 89.7 6e-13 >seq177174 Length=16738 Score = 89.7 bits (98), Expect = 6e-13 Identities = 181/265 (68%), Gaps = 8/265 (3%) Strand=Plus/Plus Query 6913 CTTGCCCGAAGCATTCGCTTTGTGCCCGTGAGTGAGATGGCCGCCGCAGTCCAAGGACAT 6972 ||||||||| || ||| | ||| || || ||||| ||||||||| | ||| | ||| Sbjct 11935 CTTGCCCGAGGCGTTCACCTTGGCGCCATGGGTGAGGTGGCCGCCGTGGGCCAGGCTCAT 11994 Query 6973 AGCGAGAACCGAATCACCCGGCTTCAGGAGTGCTTGGTAAACTGCCTGGTTTGCTTGTGA 7032 |||| | | || ||||||| ||| || || ||| || |||||||| || || || Sbjct 11995 GCCGAGGATGGTGTCGCCCGGCTGCAGCAGCGCGAAGTACACGGCCTGGTTGGCCTGCGA 12054 Query 7033 ACCGGAATGAGGTTGAACGTTTGCGAAATTGCAACTAAACAGTT-CTTTAGCACGCTCAA 7091 ||| || || || ||||| || | | | | ||||| | ||| || || || | Sbjct 12055 GCCGCTGTGTGGCTGCACGTTCGCATAGTCGGCGCCGAACAGCTGCTTGAGG-CGGTCGA 12113 Query 7092 TTGCCAGGTTCTCG---ATTTCATCGGCTTTTACGCAGCCGCCATAATACCGTTTGCCCG 7148 | ||||| | |||| || || || | |||| || || || || || ||||||| Sbjct 12114 TCGCCAGCTGCTCGGCGATGTCCACGTACT---CGCAACCACCGTAGTAGCGCTTGCCCG 12170 Query 7149 GATATCCCTCAGCATACTTGTTGGT 7173 |||| || || || ||||||||||| Sbjct 12171 GATAGCCTTCGGCGTACTTGTTGGT 12195 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 554131675161960