Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pteronotus_20parnellii_20[genbank_20GCA_5F000465405.1_202013-09-13]
177,401 sequences; 1,960,317,893 total letters
Query= NC_005179.1
Length=134721
Score E
Sequences producing significant alignments: (Bits) Value
seq6383 237 1e-57
seq39192 129 5e-25
seq32390 89.7 4e-13
>seq6383
Length=23588
Score = 237 bits (262), Expect = 1e-57
Identities = 587/885 (66%), Gaps = 8/885 (1%)
Strand=Plus/Plus
Query 12845 GACATAACAGACATTTTTTGATATTCGCTAACTCTTTTTTCAAAAAAGTTTGTTTTTCCT 12904
||||| || ||| | |||| |||| ||| | || ||||| ||||| || || |||
Sbjct 7234 GACATCACCCCCATCCTCTGATTCTCGCCTACTTTCTTCTCAAAGAAGTTGGTCTTCCCT 7293
Query 12905 TCTAACGAAATATTTTCCATAAAATCGAAAGGATTTTTCGAACA-ATAGTATTTTTTACA 12963
|||| || || || ||||| || || || || |||| | | | || || | | |
Sbjct 7294 TCTAGTGAGATGTTCTCCATGAAGTCAAACGGGTTTTCCACTCGGAAAGCCTTGCTAAAA 7353
Query 12964 CCCTAATTCTAGTAACAATCTGTCAGCAACAAACTCTATGTACTGTTTCATTAAATCACA 13023
||| | || || | | ||||| || ||||| || |||||||||||||| ||| |||
Sbjct 7354 CCC-AGCTCCAGCAGGAGCCTGTCGGCCACAAATTCAATGTACTGTTTCATCAAAGTACA 7412
Query 13024 GTTCATTCCTATTAATTTTACAGGCATAGCTTCTGTTAAAAAGtttttttCTATATCAAC 13083
||||| || || | || || |||| || || || | || | | |||||| | ||
Sbjct 7413 ATTCATCCCAATGAGCTTCACTGGCAAGGCCTCCGTGAGGAACTCCTGTTCTATCTTAAA 7472
Query 13084 TGCTTCGATAACTATGTCTCTTATTACGTTCTCTAATGGAGGATT---TGATAGATGCTT 13140
||| | ||| | || || ||| ||| |||| | ||| || || || || ||
Sbjct 7473 TGCATTGATGATGATTTC-CTT--TACTTTCTGCTCCGAAGGTTTGTGTGCCAGGTGTTT 7529
Query 13141 AAACATCATACATGCAAAATCACAGTGCAATCCTTCATCTCTACTTATTAGCTCGTTTGA 13200
||||||| || ||||| ||||||||||| || |||||||| || || |||||| | ||
Sbjct 7530 GAACATCAGGCAGGCAAAGTCACAGTGCAAGCCCTCATCTCTGCTAATAAGCTCGCTGGA 7589
Query 13201 AAATGTTAGACCCGGCATAAGCCCTCGTTTTTTAATCCAAAATATAGCAGCAAACGAACC 13260
||||| || || ||||| |||||||| || || | ||| ||||| | | || || ||
Sbjct 7590 GAATGTGAGGCCGGGCATCAGCCCTCGCTTCTTGAGCCAGAATATCGATGTGAAAGACCC 7649
Query 13261 CGaaaaaaaTATTCCTTCAACTGCTGCAAACGCTATCAACCTTTCACCATACGTACTATT 13320
|| || || |||||||| || | |||||||| | || | || ||||| || |
Sbjct 7650 AGAGAAGAAGATTCCTTCCACCTCAGCAAACGCCACCACGCGCTCTCCATAGGTGGCCTC 7709
Query 13321 TTTACTCTCTATCCACTTTCTGGCCCAGTTTGCTTTTTGTTTAACGCAGTTCATATTTTC 13380
||| | | ||||| |||||||| ||| || | || || || ||| || ||
Sbjct 7710 TTTGTCCCCAATCCAACGCAAGGCCCAGTCTGCCTTCTTCTTGACACAAGGCATCTTCTC 7769
Query 13381 TATTGCGTTAAATAAATAAtttttttCCTTACTGTCTAAAATATAAGTATCTATCAATAA 13440
|| || || || | | | | || || |||| || ||||| || || | |
Sbjct 7770 GATGGCATTGAAGAGGAACTCCCTCTCTTTGGGGTCTTTGATGTAAGTGTCGATGAGGAG 7829
Query 13441 GCTATACATTTCTGAATGAATATTTTCCATCGCTATTTGGAAACCATAAAAACATCTAGC 13500
||| ||||| || ||||| || |||||||| || || ||||| ||||| || || | ||
Sbjct 7830 GCTGTACATCTCAGAATGTATGTTTTCCATGGCGATCTGGAAGCCATAGAAGCAGCGGGC 7889
Query 13501 CTCTGATACCTGAACTTCGGAGTAAAATCTTTCTGCTAAGTTTTCGTTAACTATCCCGTC 13560
|||| | ||||||||| | || | || | |||||||| || || || || ||
Sbjct 7890 TTCTGTGATCTGAACTTCCTGGCTGAACCGCTCCACCAAGTTTTCATTCACGATGCCATC 7949
Query 13561 ACTAGCAGCaaaaaaaGCAAGTATGTGCTTAATAAAttttttttCGTTTTCTGACAACTT 13620
|| || ||||| || || || | |||| ||| || | | |||| || || |
Sbjct 7950 GCTGGCTGCAAAGAACGCCAGGACGTGCGAAATGAAGTACCTCTCGTCGTCCTTCAGGGT 8009
Query 13621 TAACCAATCTGGAAAATCTTTTGATAAATCTACCTCCTCAACGGTCCAAAAAGAAGCAAC 13680
||| | | | || || || | || |||||||| | ||||| || ||||| |
Sbjct 8010 CTCCCAGTGCAGCAGGTCCTTGGAAAGGTCCACCTCCTCCGCTGTCCAGAAGGAAGCCTC 8069
Query 13681 AGCCTTCTTATACATCATCCATATATCCTTATAAACAATGGGAAA 13725
|||||||| |||||| ||| || || | || | ||||| ||
Sbjct 8070 GGCCTTCTTGTACATCTGCCAGATGTCGTGGTACTCGATGGGGAA 8114
>seq39192
Length=20454
Score = 129 bits (142), Expect = 5e-25
Identities = 486/757 (64%), Gaps = 23/757 (3%)
Strand=Plus/Minus
Query 12845 GACATAACAGACATTTTTTGATATTCGCTAACTCTTTT--TTCAAAAAA------GTTTG 12896
||||| || ||| | ||||| || | |||||| | |||||| || |||||
Sbjct 14610 GACATCACTCCCATCCTCTGATACTCACCTACTCTTCTCTTTCAAACAAAAGGATGTTTG 14551
Query 12897 TTTTTCCTTCTAACGAAATATTTTCCATAAAATCGAAAGGATTTTTCGAACAATAGTAT- 12955
| || | ||| | ||| | |||||||| || || || || |||| | | | | |
Sbjct 14550 TCTTCCTTTCCAGTGAAGTGTTTTCCATGAAGTCAAATGGGTTTT----AGACTTGGAAA 14495
Query 12956 ---TTTTTACACCCTAATTCTAGTAACAATCTGTCAGCAACAAACTCTATGTACTGTTTC 13012
|| ||||| || | || || | | |||| || ||||| || |||||||| |||
Sbjct 14494 GCCTTGTTACAACCCAGCTCCAGCAGGAGCCTGTTGGCCACAAATTCAATGTACTGCTTC 14435
Query 13013 ATTAAATCACAGTTCATTCCTATTAATTTTACAGGCATAGCTTCTGTTAAAAAGtttttt 13072
| ||| ||| ||||| || | | || || |||| || ||||| | || || | |
Sbjct 14434 ACCAAAGTACAATTCATCCCATTGAGCTTCACTGGCAAGGCCTCTGTGAGGAACTTCTGT 14375
Query 13073 tCTATATCAACTGCTTCGATAACTATGTCTCTTATTACGTTCTCTAATGGAGGATTTGAT 13132
| ||| ||| | | ||||| || || ||| | | || || | | |
Sbjct 14374 TTTATCCTAACCACATTGATAATGATTTCATTTACTCTCTGATCCAAATGTTTGTGTAGC 14315
Query 13133 AGATGCTTAAACATCATACATGCAAAATCACAGTGCAATCCTTCATCTCTACTTATTAGC 13192
|| || || ||||||| || ||||| ||||||||||| || |||||||| | || |||
Sbjct 14314 AGGTGTTTGAACATCAGGCAGGCAAAGTCACAGTGCAA-CCCTCATCTCTGTTAATAAGC 14256
Query 13193 TCGTTTGAAAATGTTAGACCCGGCATAAGCCCTCGTTTTTTAATCCAAAATATAGCAGCA 13252
|| || || ||||| || || ||||| |||||||| || || | || ||||| |
Sbjct 14255 TCATTGGAGAATGTGAGGCCAGGCATCAGCCCTCGCTTCTTGAGCCCGAATATCAATGTG 14196
Query 13253 AACGAACCCGaaaaaaaTATTCCTTCAACTGCTGCAAACGCTATCAACCTTTCACCATAC 13312
| || || ||||| || |||||||| | || ||||| | | || | || |||||
Sbjct 14195 GAAGACCCAGAAAAGAAGATTCCTTCCATGGCAGCAAAGGTCACCACACGATCTCCATAG 14136
Query 13313 GTACTATTTTTACTCTCTATCCACTTTCTGGCCCAGTTTG-CTTTTTGTTTAACGCAGTT 13371
| | ||| | | ||||| ||| |||| || ||| ||| || ||
Sbjct 14135 GGGGCCTCTTTGTCCCCAATCCAACGCAAGGCTCAGTCTGTCTTCTTG----ACACAAGG 14080
Query 13372 CATATTTTCTATTGCGTTAAATAAATAAtttttttCCTTACTGT-CTAAAATATAAGTAT 13430
||| |||| || |||| || | | | | | ||| || || ||| ||||| |
Sbjct 14079 CATCATTTCAATGACGTTGAAGAGGCACTCCCTCTTCTTGGGGTCCTTGAATGTAAGTGT 14020
Query 13431 CTATCAATAAGCTATACATTTCTGAATGAATATTTTCCATCGCTATTTGGAAACCATAAA 13490
|||| | |||||||||| || ||||| || |||||||| || | ||||| || || |
Sbjct 14019 CTATGAGGAAGCTATACACCTCAGAATGTATGTTTTCCATGGCAACCTGGAAGCCGTAGA 13960
Query 13491 AACATCTAGCCTCTGATACCTGAACTTCGGAGTAAAATCTTTCTGCTAAGTTTTCGTTAA 13550
| || | || | || | ||||||||| | ||| | || | |||||| | || |
Sbjct 13959 AGCAGCAGGCTTTTGTGATCTGAACTTCCTGGCTAAACCGCTCCACCAAGTTTGCATTCA 13900
Query 13551 CTATCCCGTCACTAGCAGCaaaaaaaGCAAGTATGTG 13587
|| || ||||| | ||||| || || || | |||
Sbjct 13899 TGATGCCATCACTCACTGCAAAGAACGCCAGGACGTG 13863
>seq32390
Length=18494
Score = 89.7 bits (98), Expect = 4e-13
Identities = 73/89 (82%), Gaps = 0/89 (0%)
Strand=Plus/Minus
Query 12977 AACAATCTGTCAGCAACAAACTCTATGTACTGTTTCATTAAATCACAGTTCATTCCTATT 13036
|| ||||||||||| |||||||| || ||||||||||| ||| ||||||||||||| ||
Sbjct 4245 AATAATCTGTCAGCTACAAACTCAATATACTGTTTCATCAAAACACAGTTCATTCCAATG 4186
Query 13037 AATTTTACAGGCATAGCTTCTGTTAAAAA 13065
| || |||| ||||||||||||||
Sbjct 4185 AGGCCAACTGGCAAGGCTTCTGTTAAAAA 4157
Score = 84.2 bits (92), Expect = 2e-11
Identities = 66/79 (84%), Gaps = 0/79 (0%)
Strand=Plus/Minus
Query 12863 TGATATTCGCTAACTCTTTTTTCAAAAAAGTTTGTTTTTCCTTCTAACGAAATATTTTCC 12922
||||| || ||||| ||| ||||| || |||||||| |||||||| ||||| ||||||
Sbjct 8431 TGATACTCTGAAACTCGTTTCTCAAAGAAATTTGTTTTCCCTTCTAAAGAAATGTTTTCC 8372
Query 12923 ATAAAATCGAAAGGATTTT 12941
|||||||| || |||||||
Sbjct 8371 ATAAAATCAAAGGGATTTT 8353
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 430050583862202
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |