Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pteronotus_20parnellii_20[genbank_20GCA_5F000465405.1_202013-09-13] 177,401 sequences; 1,960,317,893 total letters Query= NC_005261.2 Length=137821 Score E Sequences producing significant alignments: (Bits) Value seq174478 123 2e-23 >seq174478 Length=6982 Score = 123 bits (136), Expect = 2e-23 Identities = 245/355 (69%), Gaps = 27/355 (8%) Strand=Plus/Minus Query 99422 GCTGGGCGTGCGCGCCCCAGAGCATGAACACCATCGGGCCGCCCTGCGCGCTCAGGCGGG 99481 |||| |||| || ||||||||||||||||||| | ||| |||| || |||| Sbjct 1265 GCTGCGCGTAGGCCCCCCAGAGCATGAACACCA-------GGCCTTCGCGTTC--GCGGT 1215 Query 99482 CCAGCAC------CGCGTGCACCA-GCCGCC--CCCAGCCCAGGC--TGGCGTGCGAGCC 99530 ||||| | |||| | | ||| ||||||| ||| ||| | ||| | Sbjct 1214 TGAGCACATCCACCACGTGGTCGGTGAAGCCTTCCCAGCCGCGGCCCTGGTGGGCG---C 1158 Query 99531 CGGCGCCCCGCTCCGC-ACGGTGAGCGAGGTGTTGAGCAGCAGCACGCCGCGGCGCGCCC 99589 |||| | | |||| | ||||| ||| || |||||||||||||||||||| |||||| Sbjct 1157 CGGCCCTGCCCTCCTCCACGGTCAGCACGGCATTGAGCAGCAGCACGCCGCGCTGCGCCC 1098 Query 99590 AGGCCTCCAGGCAGCCGTGCTGCGGCCGCGGGGTCCCGGGGAAGTTCTTCTGCACGGCCG 99649 | | | ||||||||||||| | || || ||| | || || | |||| | || Sbjct 1097 ACGGCACCAGGCAGCCGTGATCGGGACGGGGGATGCCCAGGTCGC-CTTCG--ATCTCCT 1041 Query 99650 CGTAGATGTTCTGGAGGCTGGGCGGGATCGGAACGCCGCGGTTCACGCTGAAGGCCAGGC 99709 |||||||||| | || ||||| | |||||||||| | ||| |||| ||| | Sbjct 1040 TGTAGATGTTCAGCAGCGATGGCGGCACCGGAACGCCGGCGGGCACCGAGAAGCTCAGTC 981 Query 99710 CGTGGGCCTGCCCGTGGCTGTGGTAGGGGTCCTGGCCCAGGATGACGACCTTGAC 99764 | || ||||| ||| | | |||||| ||||||||||||||||| || || || || Sbjct 980 CATGCGCCTGGCCGCGCCCGTGGTACGGGTCCTGGCCCAGGATCACCACTTTCAC 926 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 439921500512760