Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pteronotus_20parnellii_20[genbank_20GCA_5F000465405.1_202013-09-13]
177,401 sequences; 1,960,317,893 total letters
Query= NC_005832.1
Length=106332
Score E
Sequences producing significant alignments: (Bits) Value
seq18562 210 1e-49
seq145711 96.9 2e-15
>seq18562
Length=18598
Score = 210 bits (232), Expect = 1e-49
Identities = 406/589 (69%), Gaps = 19/589 (3%)
Strand=Plus/Minus
Query 25389 GGAAAGGGTCTGGGCTCCCTCTCGAGCTG-AGTCTTCAGCGGTTCTACGTGATCCAGGTA 25447
||||||| ||| || || | || ||||| ||| |||||||| || |||| ||||||
Sbjct 12877 GGAAAGG-TCTTGGTTCTCACTGAAGCTGCAGT-TTCAGCGGCTCAGTATGATTCAGGTA 12820
Query 25448 GACGTGAGCGTCTCCCAGAGTGTGGACAAACTCTCCCGGTTCTAGCCCGGTAACGTAAGC 25507
||||| || ||||||| |||||| ||||| || || || | ||| || | | || ||
Sbjct 12819 AACGTGTGCATCTCCCAAAGTGTGTACAAAGTCACCTGGCTTTAGGCCCATGATGTGTGC 12760
Query 25508 CATCATGTACGTGAGGAGAAAGTAGCTGGCGATGTTAAAGGGTACCCCGAACCCCATGTC 25567
||||||| ||||| || ||||||||| |||||| |||||| | || | ||||||||
Sbjct 12759 GATCATGTGGGTGAGCAGGGAGTAGCTGGAGATGTTGAAGGGTGCGCCCAGGCCCATGTC 12700
Query 25568 CCCCCGACCTCTGGTAGAGCTGACACGAGAGCTC----TTCGTCGCT----CACGTAAAA 25619
| ||||||||||| ||||| || || ||||| ||| || | |||||| ||
Sbjct 12699 TGCT-GACCTCTGGTATAGCTGGCAGGACAGCTCCCCATTCATCACGTAGACACGTAGAA 12641
Query 25620 CTGACACATGGTGTAGCACGGAGGAAGAGCTAT--AAGGCCCAAG-TCTTTAGGGTTCCA 25676
||| || | || | ||| ||||| || || || |||| ||| ||||| || |||||
Sbjct 12640 CTGGCAAAGGGCATGGCATGGAGGTAGGGCCATGAAAGG---AAGATCTTTTGGATTCCA 12584
Query 25677 GGCGCACACGATGATGCACCTGTCTTCTGGGTTGTCCCTGATAAGATCCGCGGTGTTTTG 25736
|| |||| ||||| | ||||| || ||| |||| | || |||||
Sbjct 12583 AGCACACAGAATGATTCTTCTGTCAGTAGGTTTGGTTTTGATCATGTCAATCACCTTTTG 12524
Query 25737 CAGCTGATCCACCCCCATCCCCGAGTAGTCTGCCCTCATGTCCGTGTACTCTGCTCCGAA 25796
||| || |||| || || || || |||| ||| | |||| ||||| || ||
Sbjct 12523 CAGTTGGCCCACTCCTTGACCTGAATAATCTGAATCCATATTTTTGTATTCTGCCCCAAA 12464
Query 25797 ATACCTCCACTGGAACCCGTACACCGGTCCTAGGTCTCCATCTTCCCTGTGCTCAAAGCC 25856
|| ||||||||| || || || || || |||| || || |||| ||| || ||
Sbjct 12463 ATGCCTCCACTGAAAGCC-TAAACTGGGCCTAAATCCCCCTCTTTTCTGCTAGAGAATCC 12405
Query 25857 CCTCTTATCCAAAAAGTCTCTGGAACCATTGGCGTCCCAGATCTTTACCCCCTTCTCGGA 25916
||||| ||||| | || |||||||| |||||||| || || ||| | ||
Sbjct 12404 AAGGCCATCCAGGAAGTCACGAGACCCATTGGCATCCCAGATTTTCACTCCCCTGGTTGA 12345
Query 25917 GAGCTCTTTGGAGTTTGTGGACCCTCTGACGAACCACAGCAGCTCCGcc 25965
|| ||||| | |||||||| || ||| ||||||||||||||| ||
Sbjct 12344 CAGTTCTTTAGCATTTGTGGATCCGTTGATAAACCACAGCAGCTCCTCC 12296
>seq145711
Length=17273
Score = 96.9 bits (106), Expect = 2e-15
Identities = 120/163 (74%), Gaps = 1/163 (1%)
Strand=Plus/Plus
Query 25490 TAGCCCGGTAACGTAAGCCATCATGTACGTGAGGAGAAAGTAGCTGGCGATGTTAAAGGG 25549
||| || || | || || |||||||| ||||| || |||||||||||||||| |||||
Sbjct 11194 TAGGCCCGTGATGTGTGCGATCATGTAGGTGAGCAGGGAGTAGCTGGCGATGTTGAAGGG 11253
Query 25550 TACCCCGAACCCCATGTCCCCCCGACCTCTGGTAGAGCTGACACGAGAGCTCTTCGTCGC 25609
|| || | ||||||| | | ||||||||||| ||||| || || ||||| | |
Sbjct 11254 CACGCCCAGGCCCATGT-CTGCTGACCTCTGGTATAGCTGGCAGGACAGCTCCCCATTCA 11312
Query 25610 TCACGTAAAACTGACACATGGTGTAGCACGGAGGAAGAGCTAT 25652
|||||| ||||| || | || | ||| ||||| || || ||
Sbjct 11313 CCACGTAGAACTGGCAGAGGGCATGGCAGGGAGGTAGGGCCAT 11355
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 339402197104773
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |