Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pteronotus_20parnellii_20[genbank_20GCA_5F000465405.1_202013-09-13] 177,401 sequences; 1,960,317,893 total letters Query= NC_005832.1 Length=106332 Score E Sequences producing significant alignments: (Bits) Value seq18562 210 1e-49 seq145711 96.9 2e-15 >seq18562 Length=18598 Score = 210 bits (232), Expect = 1e-49 Identities = 406/589 (69%), Gaps = 19/589 (3%) Strand=Plus/Minus Query 25389 GGAAAGGGTCTGGGCTCCCTCTCGAGCTG-AGTCTTCAGCGGTTCTACGTGATCCAGGTA 25447 ||||||| ||| || || | || ||||| ||| |||||||| || |||| |||||| Sbjct 12877 GGAAAGG-TCTTGGTTCTCACTGAAGCTGCAGT-TTCAGCGGCTCAGTATGATTCAGGTA 12820 Query 25448 GACGTGAGCGTCTCCCAGAGTGTGGACAAACTCTCCCGGTTCTAGCCCGGTAACGTAAGC 25507 ||||| || ||||||| |||||| ||||| || || || | ||| || | | || || Sbjct 12819 AACGTGTGCATCTCCCAAAGTGTGTACAAAGTCACCTGGCTTTAGGCCCATGATGTGTGC 12760 Query 25508 CATCATGTACGTGAGGAGAAAGTAGCTGGCGATGTTAAAGGGTACCCCGAACCCCATGTC 25567 ||||||| ||||| || ||||||||| |||||| |||||| | || | |||||||| Sbjct 12759 GATCATGTGGGTGAGCAGGGAGTAGCTGGAGATGTTGAAGGGTGCGCCCAGGCCCATGTC 12700 Query 25568 CCCCCGACCTCTGGTAGAGCTGACACGAGAGCTC----TTCGTCGCT----CACGTAAAA 25619 | ||||||||||| ||||| || || ||||| ||| || | |||||| || Sbjct 12699 TGCT-GACCTCTGGTATAGCTGGCAGGACAGCTCCCCATTCATCACGTAGACACGTAGAA 12641 Query 25620 CTGACACATGGTGTAGCACGGAGGAAGAGCTAT--AAGGCCCAAG-TCTTTAGGGTTCCA 25676 ||| || | || | ||| ||||| || || || |||| ||| ||||| || ||||| Sbjct 12640 CTGGCAAAGGGCATGGCATGGAGGTAGGGCCATGAAAGG---AAGATCTTTTGGATTCCA 12584 Query 25677 GGCGCACACGATGATGCACCTGTCTTCTGGGTTGTCCCTGATAAGATCCGCGGTGTTTTG 25736 || |||| ||||| | ||||| || ||| |||| | || ||||| Sbjct 12583 AGCACACAGAATGATTCTTCTGTCAGTAGGTTTGGTTTTGATCATGTCAATCACCTTTTG 12524 Query 25737 CAGCTGATCCACCCCCATCCCCGAGTAGTCTGCCCTCATGTCCGTGTACTCTGCTCCGAA 25796 ||| || |||| || || || || |||| ||| | |||| ||||| || || Sbjct 12523 CAGTTGGCCCACTCCTTGACCTGAATAATCTGAATCCATATTTTTGTATTCTGCCCCAAA 12464 Query 25797 ATACCTCCACTGGAACCCGTACACCGGTCCTAGGTCTCCATCTTCCCTGTGCTCAAAGCC 25856 || ||||||||| || || || || || |||| || || |||| ||| || || Sbjct 12463 ATGCCTCCACTGAAAGCC-TAAACTGGGCCTAAATCCCCCTCTTTTCTGCTAGAGAATCC 12405 Query 25857 CCTCTTATCCAAAAAGTCTCTGGAACCATTGGCGTCCCAGATCTTTACCCCCTTCTCGGA 25916 ||||| ||||| | || |||||||| |||||||| || || ||| | || Sbjct 12404 AAGGCCATCCAGGAAGTCACGAGACCCATTGGCATCCCAGATTTTCACTCCCCTGGTTGA 12345 Query 25917 GAGCTCTTTGGAGTTTGTGGACCCTCTGACGAACCACAGCAGCTCCGcc 25965 || ||||| | |||||||| || ||| ||||||||||||||| || Sbjct 12344 CAGTTCTTTAGCATTTGTGGATCCGTTGATAAACCACAGCAGCTCCTCC 12296 >seq145711 Length=17273 Score = 96.9 bits (106), Expect = 2e-15 Identities = 120/163 (74%), Gaps = 1/163 (1%) Strand=Plus/Plus Query 25490 TAGCCCGGTAACGTAAGCCATCATGTACGTGAGGAGAAAGTAGCTGGCGATGTTAAAGGG 25549 ||| || || | || || |||||||| ||||| || |||||||||||||||| ||||| Sbjct 11194 TAGGCCCGTGATGTGTGCGATCATGTAGGTGAGCAGGGAGTAGCTGGCGATGTTGAAGGG 11253 Query 25550 TACCCCGAACCCCATGTCCCCCCGACCTCTGGTAGAGCTGACACGAGAGCTCTTCGTCGC 25609 || || | ||||||| | | ||||||||||| ||||| || || ||||| | | Sbjct 11254 CACGCCCAGGCCCATGT-CTGCTGACCTCTGGTATAGCTGGCAGGACAGCTCCCCATTCA 11312 Query 25610 TCACGTAAAACTGACACATGGTGTAGCACGGAGGAAGAGCTAT 25652 |||||| ||||| || | || | ||| ||||| || || || Sbjct 11313 CCACGTAGAACTGGCAGAGGGCATGGCAGGGAGGTAGGGCCAT 11355 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 339402197104773