Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pteronotus_20parnellii_20[genbank_20GCA_5F000465405.1_202013-09-13]
177,401 sequences; 1,960,317,893 total letters
Query= NC_005906.1
Length=81755
Score E
Sequences producing significant alignments: (Bits) Value
seq15915 87.8 9e-13
seq103819 86.0 3e-12
seq7689 86.0 3e-12
seq61101 84.2 1e-11
seq76065 82.4 4e-11
seq33823 82.4 4e-11
>seq15915
Length=1121
Score = 87.8 bits (96), Expect = 9e-13
Identities = 72/87 (83%), Gaps = 1/87 (1%)
Strand=Plus/Plus
Query 11445 AAAAATCAAAT-TGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGAC 11503
||||| | ||| |||||| | |||||||||| ||||||| ||||||||||||| ||
Sbjct 176 AAAAAGCGAATGTGGCCCGTACGGGGATCGAACCCGCGACCTTGGCGTTATTAGCACCAC 235
Query 11504 GCTCTRACCAACTGAGCTAATGGGCCG 11530
||||| |||||||||||||| |||||
Sbjct 236 GCTCTAACCAACTGAGCTAACCGGCCG 262
>seq103819
Length=16670
Score = 86.0 bits (94), Expect = 3e-12
Identities = 64/76 (84%), Gaps = 0/76 (0%)
Strand=Plus/Minus
Query 11455 TTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAA 11514
||||||| | |||||||||| ||||||| ||||||||||||| ||||||| |||||
Sbjct 13774 TTGGCCCGTACGGGGATCGAACCCGCGACCTTGGCGTTATTAGCACCACGCTCTAACCAA 13715
Query 11515 CTGAGCTAATGGGCCG 11530
||||||||| |||||
Sbjct 13714 CTGAGCTAACCGGCCG 13699
>seq7689
Length=8334
Score = 86.0 bits (94), Expect = 3e-12
Identities = 66/79 (84%), Gaps = 0/79 (0%)
Strand=Plus/Plus
Query 11455 TTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAA 11514
||||||| | |||||||||| ||||||| ||||||||||||| ||||||| |||||
Sbjct 1784 TTGGCCCGTACGGGGATCGAACCCGCGACCTTGGCGTTATTAGCACCACGCTCTAACCAA 1843
Query 11515 CTGAGCTAATGGGCCGTCG 11533
||||||||| ||||| ||
Sbjct 1844 CTGAGCTAACCGGCCGGCG 1862
>seq61101
Length=20802
Score = 84.2 bits (92), Expect = 1e-11
Identities = 56/63 (89%), Gaps = 0/63 (0%)
Strand=Plus/Minus
Query 11468 GGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGG 11527
|||||||||| ||||||| ||||||||||||| ||||||| |||||||||||||| ||
Sbjct 12817 GGATCGAACCCGCGACCTTGGCGTTATTAGCACCACGCTCTAACCAACTGAGCTAACCGG 12758
Query 11528 CCG 11530
|||
Sbjct 12757 CCG 12755
>seq76065
Length=15376
Score = 82.4 bits (90), Expect = 4e-11
Identities = 55/62 (89%), Gaps = 0/62 (0%)
Strand=Plus/Minus
Query 11468 GGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGG 11527
|||||||||| ||||||| ||||||||||||| ||||||| |||||||||||||| ||
Sbjct 11703 GGATCGAACCCGCGACCTTGGCGTTATTAGCACCACGCTCTAACCAACTGAGCTAACCGG 11644
Query 11528 CC 11529
||
Sbjct 11643 CC 11642
>seq33823
Length=24245
Score = 82.4 bits (90), Expect = 4e-11
Identities = 55/62 (89%), Gaps = 0/62 (0%)
Strand=Plus/Minus
Query 11468 GGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGG 11527
|||||||||| ||||||| ||||||||||||| ||||||| |||||||||||||| ||
Sbjct 13876 GGATCGAACCCGCGACCTTGGCGTTATTAGCACCACGCTCTAACCAACTGAGCTAACCGG 13817
Query 11528 CC 11529
||
Sbjct 13816 CC 13815
Lambda K H
0.639 0.410 0.921
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 260925836495476
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |