Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pteronotus_20parnellii_20[genbank_20GCA_5F000465405.1_202013-09-13] 177,401 sequences; 1,960,317,893 total letters Query= NC_006150.1 Length=221454 Score E Sequences producing significant alignments: (Bits) Value seq22824 147 3e-30 seq92850 105 9e-18 >seq22824 Length=28232 Score = 147 bits (162), Expect = 3e-30 Identities = 170/229 (74%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 9634 GTCTGAAACAGTTGTTCGTCACTCCATTCTGGATGTTCTCGTTTCAGAACATCGCACACT 9693 ||||| |||| | || || |||||| ||||| || |||| || || || |||||| Sbjct 24671 GTCTGGAACAACCGCTCATCGTCCCATTCCGGATGCTCCTGTTTAAGCACGTCACACACT 24730 Query 9694 CTGTTGTGTTCCCTGAGCCAGATAGTAGCGTACATCATGAGACCAGGCACCAGGCCAAAA 9753 ||||||||||| | |||||||| || ||||||||||| |||||||||||||||||||| Sbjct 24731 CTGTTGTGTTCTCGCAGCCAGATCGTGGCGTACATCATCAGACCAGGCACCAGGCCAAAT 24790 Query 9754 GCCTCTTGACCGACAGCCAGACGCATATTTTCGGGCACTTCGGGAGGATAGATCATGTGC 9813 ||| || || ||||| | |||| | ||||| || | || || |||| ||| | Sbjct 24791 AGCTCCTGCCCCACAGCAAACCGCAGGTGCTCGGGGACGTGAGGCGGGTAGAGCATCTCG 24850 Query 9814 ACCTGGACATCTTTGACCGAGGGGGGATACATTTCACCGTCAATAATCT 9862 |||| |||||||||| ||| || |||| || || ||||| |||| Sbjct 24851 GCCTGAGTGTCTTTGACCGTGGGAGGGTACACCTCGCCATCAATTATCT 24899 Score = 116 bits (128), Expect = 5e-21 Identities = 100/124 (81%), Gaps = 0/124 (0%) Strand=Plus/Plus Query 10028 TCTTACCCCATGTCCCAGTCCTTTAGTGAAGGCCGGGCCTCGCGCCAAATCAGTCCTAAA 10087 ||||||||| || ||||||||||||||||||||||| || ||| ||| ||| | || Sbjct 25755 TCTTACCCCGTGGCCCAGTCCTTTAGTGAAGGCCGGTCCGCGCTTATGATCTGTCTTGAA 25814 Query 10088 AAACTGGTGCGTGAAATGTTGGCCAAAAAAGGCAAACATTAAGTTGGTGCCCTGGGGATC 10147 |||||| || ||||| || ||| | || || |||||||| || || |||||||||||||| Sbjct 25815 AAACTGATGGGTGAAGTGCTGGGCGAAGAATGCAAACATCAAATTTGTGCCCTGGGGATC 25874 Query 10148 GGGA 10151 ||| Sbjct 25875 CGGA 25878 Score = 109 bits (120), Expect = 8e-19 Identities = 184/264 (70%), Gaps = 2/264 (1%) Strand=Plus/Plus Query 9322 CTTACTCGGCCAGCTATTTGTTTCGTGAACGATTCTACTAGCTGGGTAATGCCGTGGGTC 9381 ||||| | |||||| ||||| || |||| ||||| || | ||||||||| ||||| | Sbjct 24064 CTTACCCTGCCAGCAATTTGCTTGCTGAATGATTCAACAAACTGGGTAATCCCGTGCTCC 24123 Query 9382 ATGAGTATGGAATTGTTGTAAACGAAGTTAATGTAGTCATACTTTGTTTTATCAATCTCA 9441 || | ||| || |||||||| | || | ||||| || | | |||||| | | Sbjct 24124 ATTAATATAGAGTTGTTGTAGAGAAACTGTTGGTAGTTGTAATCCTGGTCATCAATTTGA 24183 Query 9442 AACGCATCCGGCATGAGAGAATGCCAGTGATACAACATGTTAAACTCGGAAAATATACGA 9501 || || |||| ||| | ||||||||| || | | |||||||||| | | || || Sbjct 24184 AAGCTGTCGGGCAGGAGGGGATGCCAGTGGTAGAGCGTGTTAAACTCAGCCGAGATGCGG 24243 Query 9502 TTTTGGTACTGGAAC-GAAGTACCAAAGAGCAGTTCGGGCTTAAACAGCAACTGAAAGTG 9560 ||||||||||||||| | | ||| ||||| || || | |||| || | ||||| Sbjct 24244 TTTTGGTACTGGAACTGCTGGTTGAAA-AGCAGCTCAGGGTCAAACTTCAGTTTGAAGTG 24302 Query 9561 GTAGCCGCTGAGCTGCTGAACATA 9584 ||||| || || ||||| || || Sbjct 24303 ATAGCCACTCAGATGCTGTACGTA 24326 Score = 96.9 bits (106), Expect = 5e-15 Identities = 113/153 (74%), Gaps = 0/153 (0%) Strand=Plus/Plus Query 10287 TCACCTTTGACCCCAAGAGGAGTTGGACAATCGTGAGGAACCGGAGGTAGAATCCTTGCG 10346 |||||||| || || | || ||||| || || | | || ||||| |||| || | Sbjct 26362 TCACCTTTCACACCCATGGGGGTTGGGCAGTCATCGGCCACGGGAGGAAGAACTCTGGTA 26421 Query 10347 TAATAGGAGAGATTGGAGAAAGCTTCCCAGCTTGGGTATTCGTAGTCCGCGTTGTAGATG 10406 ||||||||||| || || || |||||||||||| ||| | |||| ||||||||| | Sbjct 26422 TAATAGGAGAGGTTAGAAAAGGCTTCCCAGCTTTTGTAGCCATAGTGCGCGTTGTAAGTT 26481 Query 10407 GGAGGGCTGTCAATCAAATCGGATCTACCTGAA 10439 || ||||| || ||||||| ||||| ||||| Sbjct 26482 GGTGGGCTATCGATCAAATGTGATCTGGCTGAA 26514 >seq92850 Length=26099 Score = 105 bits (116), Expect = 9e-18 Identities = 136/188 (72%), Gaps = 0/188 (0%) Strand=Plus/Plus Query 8753 AACCCCACGTCTCCGCCGAAGGTGCTGGGTTTCCAGTAACCCGGGGAGCAGATGACGTTC 8812 || |||| || || || || ||||| | |||||||| | || || |||||| ||| Sbjct 9200 AAGCCCATCTCGCCACCAAACGTGCTCGACTTCCAGTACTCTGGAGAACAGATGGGATTC 9259 Query 8813 GCCATGAGGCCTTTGAGGGAAAACGGAGCCCCCAGCTCGAGAATGCTCTCACCGAAGATG 8872 | | |||||| ||||||||||| |||||||| | ||| | || ||||| || |||||| Sbjct 9260 CCTAAGAGGCCCTTGAGGGAAAAGGGAGCCCCAATCTCTATCATACTCTCCCCAAAGATG 9319 Query 8873 GCGTTGGGACGGGGCTTTTCCACCAAGAATCCGGTGTACAACTCCACAGCCTCGATGTCT 8932 | ||| ||| || ||| || | | | ||| | ||| ||||||| || || |||||| Sbjct 9320 GAGTTTGGATGGCACTTCTCAAGAAGCAGTCCTGGGTAGAACTCCAAGGCATCAATGTCT 9379 Query 8933 CCGTAAAG 8940 || || || Sbjct 9380 CCATAGAG 9387 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 706953637399440