Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pteronotus_20parnellii_20[genbank_20GCA_5F000465405.1_202013-09-13] 177,401 sequences; 1,960,317,893 total letters Query= NC_006151.1 Length=143461 Score E Sequences producing significant alignments: (Bits) Value seq174478 100 3e-16 >seq174478 Length=6982 Score = 100 bits (110), Expect = 3e-16 Identities = 169/237 (71%), Gaps = 7/237 (3%) Strand=Plus/Minus Query 94198 CACGGTCAGCGTCGTGTTCAGCAGCAGCACCCCGCGGCGCGCCCAGGCCTCCAGGCAGCC 94257 |||||||||| | || ||||||||||| ||||| ||||||| | | |||||||||| Sbjct 1141 CACGGTCAGCACGGCATTGAGCAGCAGCACGCCGCGCTGCGCCCACGGCACCAGGCAGCC 1082 Query 94258 GTGGGCGGG-CGCGGGCAGCGTCGGGTACGTCGCCCGGACCGCCGCGAAGATGTTGGCCA 94316 ||| |||| || ||| || | ||| || | | || | || | ||||||| || Sbjct 1081 GTGATCGGGACGGGGGATGCC-CAGGT-CGCCTTC--GATCTCCTTGTAGATGTTCAGCA 1026 Query 94317 GGCTCGGGGGGATCGGCACCCCGCGCCGG-ACGCTGAAGGCCAGCCCGTGGGCCTGGCCC 94375 | || || | ||| || ||| || || || |||| ||| || || |||||||| Sbjct 1025 GCGATGGCGGCACCGGAACGCCG-GCGGGCACCGAGAAGCTCAGTCCATGCGCCTGGCCG 967 Query 94376 GGCCCGTGGTACGGGTCCTGGCCGATGATGACCACCTTGACGTCCTCGGGCGCCGTG 94432 |||||||||||||||||||||| | ||| ||||| || || | ||| || |||| Sbjct 966 CGCCCGTGGTACGGGTCCTGGCCCAGGATCACCACTTTCACCTGTTCGAACGGCGTG 910 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 457929478847160