Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pteronotus_20parnellii_20[genbank_20GCA_5F000465405.1_202013-09-13]
177,401 sequences; 1,960,317,893 total letters
Query= NC_006549.1
Length=140131
Score E
Sequences producing significant alignments: (Bits) Value
seq548 113 4e-20
seq79482 95.1 1e-14
seq85393 93.3 4e-14
seq79216 93.3 4e-14
seq104034 86.0 6e-12
seq8818 84.2 2e-11
seq161317 82.4 7e-11
>seq548
Length=19863
Score = 113 bits (124), Expect = 4e-20
Identities = 151/210 (72%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 94798 CACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTC 94857
||||||||||| || || || || || | ||| || || | |||| | ||||||
Sbjct 10965 CACCAAGTGCAGGGTGGACTCTTTCTGAATGTTGTAGTCCGAGAGAGTGCAGCCATCCTC 10906
Query 94858 CAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATA 94917
||||||||| || |||| || | || ||||| || || || || || || ||||| |
Sbjct 10905 CAGCTGTTTGCCCACAAACATCAGTCACTGCTGGTCAGGTGGGATGCCCTCCTTGTCTTG 10846
Query 94918 AATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTT 94977
||||| || ||||| | | |||||| | | ||||| |||| |||||||| ||
Sbjct 10845 GATTTTAGCTTTGACATTCTCAATGGTGTCACTGGGCTCGACCTCAAGGGTGATGGTCTT 10786
Query 94978 TCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007
||||| || || |||||||||||||||||
Sbjct 10785 GCCAGTCAGGGTCTTCACAAAGATCTGCAT 10756
>seq79482
Length=29390
Score = 95.1 bits (104), Expect = 1e-14
Identities = 158/227 (70%), Gaps = 1/227 (0%)
Strand=Plus/Minus
Query 94781 CCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTC 94840
||||| ||||| |||| |||| ||||| |||||| || || || | ||| || | | |
Sbjct 9773 CCTCCCCTCAAGCGCAGGACCAGGTGCAGAGTAGACTCTTTCTGGATGTTGTACTTGGAC 9714
Query 94841 ATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGA 94900
| ||| ||| |||||||| || || | ||||| | | ||||| || || ||
Sbjct 9713 AGGATGTGCCCATCTTCCAGCTGCTTCCCAGCGAAGATCAGCCGCTGCTGGTCAGGGGGG 9654
Query 94901 ATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACG 94960
| || || ||||| | || || |||||||| | | | |||||| | | | |||
Sbjct 9653 -TGCCCTCCTTGTCTTGTATCTTGGCCTTGACATCCTCAATGGTGTCACTGGGCTTGACC 9595
Query 94961 TCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007
|| | |||||||| || ||||| || || ||||| |||||||||||
Sbjct 9594 TCCAGGGTGATGGTCTTGCCAGTCAGGGTCTTCACGAAGATCTGCAT 9548
>seq85393
Length=7687
Score = 93.3 bits (102), Expect = 4e-14
Identities = 146/209 (70%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 94799 ACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTCC 94858
|||||||||| ||| || || || || ||| || || | |||| | ||| |||
Sbjct 5670 ACCAAGTGCAGAGTGGACTCTTTCTGAGTGTTTTAGTCCGAGAGAGTGCGGCCATCTTCC 5611
Query 94859 AGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAA 94918
|||||||| || |||| || | || ||||| || || || || || || ||||| ||
Sbjct 5610 AGCTGTTTGCCTGCAAAAATCAGTCGCTGCTGGTCAGGCGGGATGCCCTCCTTGTCTTAG 5551
Query 94919 ATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTT 94978
||||| | |||||| | |||||| | | || || |||| | ||||| | ||
Sbjct 5550 ATTTTACCTTTGACGTTCTCAGTGGTGTCACTGGGCTCAACCTCAAGCATGATGATCTTG 5491
Query 94979 CCAGTAAGAGTTTTCACAAAGATCTGCAT 95007
||||| || | |||||||||||||||||
Sbjct 5490 CCAGTCAGGGCCTTCACAAAGATCTGCAT 5462
>seq79216
Length=33065
Score = 93.3 bits (102), Expect = 4e-14
Identities = 159/228 (70%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 94781 CCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTC 94840
|| ||||||| |||| |||| ||||| || || || || || | ||| || ||
Sbjct 3407 CCACCTCTCAGGCGCAGGACCAGGTGCAGGGTGGACTCTTTCTGGATGTTGTAGTCAGAA 3466
Query 94841 ATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGA 94900
| |||| | |||||||||||| || || ||||||| | || ||||| || || ||
Sbjct 3467 AGAGTGCGGCCATCCTCCAGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTCGGGGGGG 3526
Query 94901 ATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGG-TCGAC 94959
|| |||||||| || | || || ||||| || | | ||||| || || || ||
Sbjct 3527 ATGCCTTCTTTATCCTGGATCTTGGCCTTCACATTCTCAATGGTGTC-GCTCGGCTCCAC 3585
Query 94960 GTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007
|| | |||||||| || || || || || ||||| |||||||||||
Sbjct 3586 CTCCAGGGTGATGGTCTTGCCGGTCAGGGTCTTCACGAAGATCTGCAT 3633
Score = 89.7 bits (98), Expect = 5e-13
Identities = 156/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 94781 CCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTC 94840
|| ||||||| |||| |||| ||||| || || || || || | ||| || ||
Sbjct 3635 CCACCTCTCAGGCGCAGGACCAGGTGCAGGGTGGACTCTTTCTGGATGTTGTAGTCAGAA 3694
Query 94841 ATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGA 94900
| |||| | ||| |||||||| || || ||||||| | || ||||| ||||| ||
Sbjct 3695 AGAGTGCGGCCATCTTCCAGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTCTGGGGGG 3754
Query 94901 ATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACG 94960
|| ||||| || || | || || || || || | | ||||| | | || ||
Sbjct 3755 ATGCCTTCCTTATCTTGGATCTTGGCTTTCACATTCTCAATGGTGTCGCTGGGCTCCACC 3814
Query 94961 TCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007
|| | |||||||| || || || || || |||||||||||||||||
Sbjct 3815 TCCAGGGTGATGGTCTTGCCTGTCAGGGTCTTCACAAAGATCTGCAT 3861
>seq104034
Length=7476
Score = 86.0 bits (94), Expect = 6e-12
Identities = 145/210 (69%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 94798 CACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTC 94857
||||||||||| || || || || || | | | || || | |||| | ||| ||
Sbjct 2067 CACCAAGTGCAGTGTGGACTCTTTCTGAATGATGTAGTCCAGGAGAGTGCGGCCATCTTC 2008
Query 94858 CAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATA 94917
|||||||| || |||| || | || ||||| || || || || || || |||| |
Sbjct 2007 CAGCTGTTGGCCTGCAAAAATCAGTCGCTGCTGGTCAGGCGGGATGCCCTCCTTGTTTTT 1948
Query 94918 AATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTT 94977
||||| || ||||| | |||||| | | || || |||| |||||||| ||
Sbjct 1947 GATTTTAGCTTTGACATTCTCAGTGGTGTCACTGGGCTCAACCTCAAGGGTGATGGTCTT 1888
Query 94978 TCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007
||||| || || |||||||||||||||||
Sbjct 1887 GCCAGTCAGGGTCTTCACAAAGATCTGCAT 1858
>seq8818
Length=48227
Score = 84.2 bits (92), Expect = 2e-11
Identities = 112/156 (72%), Gaps = 0/156 (0%)
Strand=Plus/Plus
Query 94852 ATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTT 94911
|||||||||| |||| || |||| || | || ||||| || || || || || || ||
Sbjct 8776 ATCCTCCAGCCGTTTGCCCGCAAAAATCAGTCGCTGCTGGTCAGGCGGGATGCCCTCCTT 8835
Query 94912 GTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGAT 94971
||| | ||||| || ||||| | |||||| | | || || |||| |||||
Sbjct 8836 GTCTTGGATTTTAGCTTTGACATTCTCAGTGGTGTCACTGGGCTCAACCTCAAGGGTGAT 8895
Query 94972 GGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007
||| || | ||| || || |||||||||||||||||
Sbjct 8896 GGTCTTGCTAGTCAGGGTCTTCACAAAGATCTGCAT 8931
>seq161317
Length=2104
Score = 82.4 bits (90), Expect = 7e-11
Identities = 141/205 (69%), Gaps = 0/205 (0%)
Strand=Plus/Plus
Query 94804 GTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTCCAGCTG 94863
||| | ||| || ||||| || | ||| ||||| | |||| | ||||| |||||
Sbjct 1839 GTGAAGAGTGGACTCCTTCTGAATGTTGTAATCAGAGAGAGTGCGGCCGTCCTCAAGCTG 1898
Query 94864 TTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAAATTTT 94923
|| ||| | || || || | |||||| || || || || || || ||||| | ||| ||
Sbjct 1899 CTTGCCGGCGAAAATCAAGCGTTGCTGGTCGGGGGGGATGCCCTCCTTGTCCTGAATCTT 1958
Query 94924 TGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGT 94983
| |||||| | ||| |||||| | || || || | |||||||| || || ||
Sbjct 1959 GGACTTGACATTGTCGATAGTGTCGGAAGACTCAACCTCGAGGGTGATGGTCTTGCCGGT 2018
Query 94984 AAGAGTTTTCACAAAGATCTGCATG 95008
| || || || ||||||||||||
Sbjct 2019 CAAGGTCTTGACGAAGATCTGCATG 2043
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 447297108660360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |