Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pteronotus_20parnellii_20[genbank_20GCA_5F000465405.1_202013-09-13] 177,401 sequences; 1,960,317,893 total letters Query= NC_006552.1 Length=65195 Score E Sequences producing significant alignments: (Bits) Value seq177183 150 7e-32 >seq177183 Length=17048 Score = 150 bits (166), Expect = 7e-32 Identities = 213/299 (71%), Gaps = 3/299 (1%) Strand=Plus/Plus Query 11207 TCGGTGCTGTAGTGGTCCTGGCCGTCCTGGCCCTGCCACTTGCGGGTGCGTAGGCTGCCT 11266 |||||| ||| | ||| |||||||||||| ||||| | || ||||||||| Sbjct 12210 TCGGTGGAGTACTTCTCCACGCCGTCCTGGCCGGTGTACTTGTCGTAACGCAGGCTGCCT 12269 Query 11267 TCGATGTAGACCTGGGAGCCCTTTCGCAGGTATTGCGCTGCGATTTCGGCCAGCCGGCCA 11326 |||| ||||||| | |||||| |||||||| | | ||||| || | ||| ||| Sbjct 12270 TCGACGTAGACCGAGCTGCCCTTGCGCAGGTACTCGCCGGCGATCTCACCGAGCTTGCCG 12329 Query 11327 AAGAGCACGACCCGGTGCCACTCGGTGCGCTCCTGCTGCTGGCCGGTCTGCTTGTCTTTC 11386 |||| ||| || |||||||| |||||||| |||||||| | ||| | |||||| || Sbjct 12330 AAGAACACCACGCGGTGCCATTCGGTGCGTTCCTGCTGGTTGCC---ATCCTTGTCCTTG 12386 Query 11387 CAGCTTTCGCTAGTGGCCAGACTGAGGGAGGTGACCGCCTTTCCGCCCGGGGTAGATCTT 11446 | | | | |||||||| |||| | ||||| |||| | |||| | |||| | | Sbjct 12387 CGGACGCTGGTGGTGGCCAGGCTGATGCGGGTGATCGCCATGCCGCTCTGGGTGTACTTC 12446 Query 11447 GCGTCTGGATCCTGGCCCAGATGGCCGACCAGGATTACCTTGTTCACTCCGCGTGCCAT 11505 |||| || || | ||| |||| |||||||||||| || || || | ||||| ||||| Sbjct 12447 ACGTCCGGGTCGTTGCCGAGATTGCCGACCAGGATGACTTTATTGATGCCGCGCGCCAT 12505 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 208048409157316