Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pteronotus_20parnellii_20[genbank_20GCA_5F000465405.1_202013-09-13] 177,401 sequences; 1,960,317,893 total letters Query= NC_006820.1 Length=196280 Score E Sequences producing significant alignments: (Bits) Value seq43218 87.8 2e-12 seq78836 82.4 1e-10 >seq43218 Length=3814 Score = 87.8 bits (96), Expect = 2e-12 Identities = 72/88 (82%), Gaps = 0/88 (0%) Strand=Plus/Minus Query 165215 GAGTTGCCCAAGTGGCGGAATTGGTAGACGCGCTGGGTTTAGGTTCCAGTGAATTAATTC 165274 |||| ||||| |||||||||||||||||||| || | || |||| | || | | || | Sbjct 1937 GAGTCGCCCAGGTGGCGGAATTGGTAGACGCACTAGTTTCAGGTACTAGCGGGTAAAACC 1878 Query 165275 GTGGAGGTTCAAGTCCTCTCTTGGGCAC 165302 |||||||||| ||||||||| ||||||| Sbjct 1877 GTGGAGGTTCGAGTCCTCTCCTGGGCAC 1850 >seq78836 Length=6672 Score = 82.4 bits (90), Expect = 1e-10 Identities = 68/83 (82%), Gaps = 0/83 (0%) Strand=Plus/Plus Query 165220 GCCCAAGTGGCGGAATTGGTAGACGCGCTGGGTTTAGGTTCCAGTGAATTAATTCGTGGA 165279 ||||| |||||||||||||||||||| || | || |||| | || | | || |||||| Sbjct 289 GCCCAGGTGGCGGAATTGGTAGACGCACTAGTTTCAGGTACTAGCGGGTAAAACCGTGGA 348 Query 165280 GGTTCAAGTCCTCTCTTGGGCAC 165302 ||||| ||||||||| ||||||| Sbjct 349 GGTTCGAGTCCTCTCCTGGGCAC 371 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 626575473110400