Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pteronotus_20parnellii_20[genbank_20GCA_5F000465405.1_202013-09-13]
177,401 sequences; 1,960,317,893 total letters
Query= NC_007145.2
Length=37639
Score E
Sequences producing significant alignments: (Bits) Value
seq174924 178 3e-40
>seq174924
Length=7573
Score = 178 bits (196), Expect = 3e-40
Identities = 296/419 (71%), Gaps = 9/419 (2%)
Strand=Plus/Plus
Query 4986 CCAGCT-CGTGCGGCCGGACATCAATCAGGAGGTCTACGGCCTGCCCGAGTATCTGAGCT 5044
|||||| |||| ||||| ||| | ||||||| |||| || |||| || | || |
Sbjct 2793 CCAGCTGCGTGAGGCCG-ACACCGATCAGGAAATCTATGGGATGCCGGAATGGTTGGCCG 2851
Query 5045 CGCTGCACTCGGCCTGGCTGAACGAATCGTCGACGCTGTTCCGGCGCAAGTATTACGAGA 5104
| |||| ||||| ||| ||||||||| | ||| ||||||| ||| ||| ||| |
Sbjct 2852 TGGTGCAGTCGGCGCTGCTCAACGAATCGGCAACGTTGTTCCGTCGCCGGTACTACTCAA 2911
Query 5105 ACGGCAGCCACGCCGGCTTCATCCTGTACATGACCGACGCCGC-GCAGAA--GCAGGACG 5161
|||| || ||||| ||||||| |||||||||||| |||| || | | ||| | |
Sbjct 2912 GCGGCTCGCATGCCGGGTTCATCCATTACATGACCGAC-CCGCAGCCGGAGGGCATG--G 2968
Query 5162 ACGTGGACAACATGCGCGACGCGCTGAAGAACGCGAAGGGGCCTGGCAACTTCCGCAACG 5221
|||||||| | |||| || |||||| || || ||||| ||||| |||||||||
Sbjct 2969 ACGTGGACGCCTTGCGTGAGGCGCTGCGAGACTCGCGTGGGCCAGGCAATTTCCGCAACC 3028
Query 5222 TGTTCATGTACGCGCCGGGCGGGAAGAAGGACGGCATCCAGCTCATCCCCGTGTCCGAGG 5281
|| || || || |||| || || |||||||| | ||||| || || | ||| |
Sbjct 3029 TGCTCGTGCACTCGCCCAATGGCAACAAGGACGGGTTGCAGCTGATTCCTATCAGCGAAG 3088
Query 5282 TCGCCGCGAAGGACGAGTTCTTCAACATCAAGAACGTGACGCGCGATGACCTGCTCGCCG 5341
| ||||| ||||| |||||| | |||||| |||||| || |||||| | || || |
Sbjct 3089 TTGCCGCAAAGGATGAGTTCACCGGGATCAAGCGCGTGACCCGTGATGACATACTGGCGG 3148
Query 5342 CGCACCGCGTGCCGCCGCAGTTGCTTGGCATCGTGCCGAGCAATTCGGGCGGGTTCGGT 5400
||| ||| | | |||||| |||| || ||||| || ||| | || || ||||||
Sbjct 3149 CGCTGCGCAT-CACCCGCAGCTGCTCGGTATCGTCCCTCAGAATGCTGGTGGATTCGGT 3206
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 120069722709962
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |