Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pteronotus_20parnellii_20[genbank_20GCA_5F000465405.1_202013-09-13] 177,401 sequences; 1,960,317,893 total letters Query= NC_007145.2 Length=37639 Score E Sequences producing significant alignments: (Bits) Value seq174924 178 3e-40 >seq174924 Length=7573 Score = 178 bits (196), Expect = 3e-40 Identities = 296/419 (71%), Gaps = 9/419 (2%) Strand=Plus/Plus Query 4986 CCAGCT-CGTGCGGCCGGACATCAATCAGGAGGTCTACGGCCTGCCCGAGTATCTGAGCT 5044 |||||| |||| ||||| ||| | ||||||| |||| || |||| || | || | Sbjct 2793 CCAGCTGCGTGAGGCCG-ACACCGATCAGGAAATCTATGGGATGCCGGAATGGTTGGCCG 2851 Query 5045 CGCTGCACTCGGCCTGGCTGAACGAATCGTCGACGCTGTTCCGGCGCAAGTATTACGAGA 5104 | |||| ||||| ||| ||||||||| | ||| ||||||| ||| ||| ||| | Sbjct 2852 TGGTGCAGTCGGCGCTGCTCAACGAATCGGCAACGTTGTTCCGTCGCCGGTACTACTCAA 2911 Query 5105 ACGGCAGCCACGCCGGCTTCATCCTGTACATGACCGACGCCGC-GCAGAA--GCAGGACG 5161 |||| || ||||| ||||||| |||||||||||| |||| || | | ||| | | Sbjct 2912 GCGGCTCGCATGCCGGGTTCATCCATTACATGACCGAC-CCGCAGCCGGAGGGCATG--G 2968 Query 5162 ACGTGGACAACATGCGCGACGCGCTGAAGAACGCGAAGGGGCCTGGCAACTTCCGCAACG 5221 |||||||| | |||| || |||||| || || ||||| ||||| ||||||||| Sbjct 2969 ACGTGGACGCCTTGCGTGAGGCGCTGCGAGACTCGCGTGGGCCAGGCAATTTCCGCAACC 3028 Query 5222 TGTTCATGTACGCGCCGGGCGGGAAGAAGGACGGCATCCAGCTCATCCCCGTGTCCGAGG 5281 || || || || |||| || || |||||||| | ||||| || || | ||| | Sbjct 3029 TGCTCGTGCACTCGCCCAATGGCAACAAGGACGGGTTGCAGCTGATTCCTATCAGCGAAG 3088 Query 5282 TCGCCGCGAAGGACGAGTTCTTCAACATCAAGAACGTGACGCGCGATGACCTGCTCGCCG 5341 | ||||| ||||| |||||| | |||||| |||||| || |||||| | || || | Sbjct 3089 TTGCCGCAAAGGATGAGTTCACCGGGATCAAGCGCGTGACCCGTGATGACATACTGGCGG 3148 Query 5342 CGCACCGCGTGCCGCCGCAGTTGCTTGGCATCGTGCCGAGCAATTCGGGCGGGTTCGGT 5400 ||| ||| | | |||||| |||| || ||||| || ||| | || || |||||| Sbjct 3149 CGCTGCGCAT-CACCCGCAGCTGCTCGGTATCGTCCCTCAGAATGCTGGTGGATTCGGT 3206 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 120069722709962