Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pteronotus_20parnellii_20[genbank_20GCA_5F000465405.1_202013-09-13] 177,401 sequences; 1,960,317,893 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq172910 343 4e-89 seq18562 122 2e-22 seq96587 89.7 1e-12 seq124664 86.0 2e-11 >seq172910 Length=5564 Score = 343 bits (380), Expect = 4e-89 Identities = 1117/1702 (66%), Gaps = 52/1702 (3%) Strand=Plus/Minus Query 363400 AAGACGATGGAGAAATCCTACCTATCTCGT-ATCAATGGTGATATTGTTGAACGCCCGCA 363458 ||||| ||||| ||| ||||| ||| || | ||| | ||||| || ||||| || Sbjct 3848 AAGACTTTGGAGCGATCATACCTC-CTCAAGATTGACGGTAAGATTGTCGAGCGCCCTCA 3790 Query 363459 GCATATGTTAATGCGTGTTGCTATTGGTATCCATTGCCCGGATGTTGATGCCG--CGATT 363516 ||| ||| | |||||||| || ||||||| ||| || || |||| || ||| | Sbjct 3789 GCACATGATCATGCGTGTGTCTGTTGGTAT---TTG---GGGTGATGATATCGAGCGAGT 3736 Query 363517 ----GAAACATATAAGCTTCTAAGT---GCTCGTGTATTCACGCACGCCACGCCAACAAT 363569 || ||||| || || | || || | | ||||| || || | || || | Sbjct 3735 CTTGGAGACATACAACCTGAT--GTCCAGCAAAT-TCTTCACACATGCTTCTCCCACGCT 3679 Query 363570 GTACAATGCTGGAACTCGTAATCCACAGATGTCTTCTTGCTTTCTTCTAAAAATGAAGGA 363629 | ||| || || || | | | || || |||| |||||||| | | | |||||||| Sbjct 3678 CTTCAACGCCGGCACCCCTCAGCCCCAATTGTCATCTTGCTTCTTGGTTGATATGAAGGA 3619 Query 363630 CGATTCCATCGAGGGTATCTTTGACACACTTAAGAATTGTGCTCTTATTTCCAAGAATGC 363689 ||| || ||||| |||| || || || |||| ||||| | || ||||||| || Sbjct 3618 CGACAGTATTGAGGGAATCTACGATACTCTCAAGACCTGTGCCATGATCTCCAAGATGGC 3559 Query 363690 AGGCGGAATTGGTGT-ATCGATCCACAATGTTCGTGC-ACAGAACAGTTACATTCGCGGC 363747 || || |||||| | | || | ||| | | ||||| || | | ||||| ||| Sbjct 3558 TGGTGGTATTGGTCTGAACG-TGCACCGTATCCGTGCTACTGG-CTCCTACATCGCCGGT 3501 Query 363748 ACAGGGGGATAC-TCGAATGGGCTGGTTCCCATGCTTCGTGTGTTTGACAATACTGCGAG 363806 || || ||| ||||| || | ||||| ||||||||||| || |||| ||||| | Sbjct 3500 ACCAACGG-TACATCGAACGGTGTTGTTCCTATGCTTCGTGTCTTCAACAACACTGCTCG 3442 Query 363807 GTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGTTTGCTATGTATCTCGAGCCTCA 363866 || |||||||||||||| ||||| || || ||||| || || ||||||||| Sbjct 3441 CTATGTCGACCAGGGTGGCAACAAGCGACCCGGTGCTTTTGCCATCTACCTCGAGCCTTG 3382 Query 363867 TCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAAAACACGGGAAAAGAGGAATTGCG 363926 || | ||| | || ||||| ||||| ||||| || ||| || |||||||| | || Sbjct 3381 GCACTCTGATGTCTTCGAGTTCCTTGATCTCCGTAAGAACCACGGTAAAGAGGAGGTCCG 3322 Query 363927 TGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACCATTTTATGAAGCGCGTGGAGGC 363986 ||| ||||| || ||| || |||||| | |||| | ||| |||||||| || || Sbjct 3321 TGCCCGTGACCTTTTCCTCGCCCTTTGGATCCCTGATCTTTTCATGAAGCGTGTTGA--A 3264 Query 363987 AGGTAAG--AATTGGTCACTCTTTTGCCCACACGAATGTCCAGGTCTTTCCGATGTATGG 364044 | | | | | ||| | || | ||||| |||| || || || || |||| | Sbjct 3263 AAGAACGGCGACTGGACGCTGATGTGCCCCAACGAGTGCCCTGGCCTCGCCGACTGCTAC 3204 Query 364045 GGTGACGACTATGTTGCTCTATACGAAAAGTATGAATCGGAGGGAAAGGCTCGTAAGACA 364104 || || || | | ||||| ||||||||||| || |||||| |||| ||| ||||| Sbjct 3203 GGAGAGGAGTTCGAGGCTCTGTACGAAAAGTACGAGAAGGAGGGCAAGGGTCGCAAGACT 3144 Query 364105 ATTCCCGCACAGAAGCTATGGTTTGCCATCATGGATTCGCAGATTGAGACAGGAACACCC 364164 || || ||||| || |||| ||||| | || | |||| |||||| |||| || Sbjct 3143 ATCAAGGCTCAGAAACTTTGGTACGCCATTCTTGAGGCCCAGACTGAGACCGGAAACCCA 3084 Query 364165 TATATGTTGTACAAAGATTCGTGCAACCGCAAGTCCAACCAGCAGCACCTTGGTACAATT 364224 | ||| | ||||| ||| | |||||||||||| |||||| || |||| ||||| | | Sbjct 3083 TTCATGCTCTACAAGGATGCCTGCAACCGCAAGAGCAACCAAAAGAACCTCGGTACCA-T 3025 Query 364225 CAGCAG-AGCAACCTATGTACCGAGATTATTGAATACACCGCTCCCGACGAGACTGCCGT 364283 | | || |||||| || || || |||||||| ||| || || |||||| || || Sbjct 3024 CCGAAGCTCCAACCTGTGCACTGAAATTATTGAGTACTGTGCCCCTGACGAGGTCGCTGT 2965 Query 364284 ATGTAACCTTGCGTCGATCGCGCTTCCGGCGTTTGTAA---AAGATGGTACT---TTTGA 364337 || |||||||| || | || || || | || | | | |||| || | || Sbjct 2964 CTGCAACCTTGCCTCTCTGGCTCTGCCCTCTTTCATCAACTACGATGAGGCTTGCTACGA 2905 Query 364338 CCACCAGCATCTTTATGACGTAACCTATCATGCTACTTGCAATCTCGACAAGGTTATCGA 364397 | | || | | | | || | | || || | |||| || ||||| | ||||| Sbjct 2904 CTTCAAGAAGTTGCACAAGGTCAGTCAGGTTGTTATTCGCAACCTGAACAAGATCATCGA 2845 Query 364398 CAAGAATTATTATCCAATTCCTGAAGCCGAGC-GTTCTAATATGCGTCATCGCCCGATTG 364456 ||| | || || ||| | || | || ||| ||||| || || || |||| Sbjct 2844 TGTGAACCACTA-CCCTGTCCAGGAGGCTCGCAACAGTAACATGCGCCACCGACCCATTG 2786 Query 364457 GTCTTGGTGTACAGGGCCTCGCTGACGTTTTTATGATGCTC--AAGATGGCATTTGATTC 364514 |||||||||| |||||||| || || | ||| | ||||| ||| | || || || Sbjct 2785 GTCTTGGTGTTCAGGGCCTTGCCGATGCTTTCCT--TGCTCTGCGCATGCCCTTCGAGTC 2728 Query 364515 GCCTGACGCTCGTGTTCTAAATAAGGAGATCTTTGAAACAATGTATTTTGCCGCAATGAC 364574 || || ||||||| || || ||| ||||||| || || || || || || | || Sbjct 2727 ACCCGAGGCTCGTGAGCTCAACAAGCAGATCTTCGAGACCATTTACCACGCTGCCCTCAC 2668 Query 364575 TG-CTTCGTGTGATTTGGCAAAAACCAAGGGAAAGTACTCTACTTATGAGGGGTCCCCTC 364633 || || |||| | |||| || |||| ||||| || | | || ||||| Sbjct 2667 TGCCTCCGTG-CAGCTGGCTAAGGAGGAGGGTCCCTACTCCACCTTCAAAGGTTCCCCCG 2609 Query 364634 TTTCGCAGGGAAAATTCCAGTTTGATCTATGGAATGTCACGCCATCTGTCCGATGGAACT 364693 || |||| | ||||||| || | ||||| |||| ||| |||| || ||| ||| Sbjct 2608 CCTCTGAGGGTATCCTCCAGTTCGACATGTGGAACGTCAAGCCCTCTGACCTCTGGGACT 2549 Query 364694 GGGATACGCTACGTTCCAACGTTAAGAAGCATGGTACTCGCAAC--TC-CCTCGTTACAG 364750 |||| || || || | || |||| || || | || ||| || ||| || | Sbjct 2548 GGGAGACTCTTCGAGAGGAAGTCAAGACACACGGCATCCGTAACAGTCTGCTCCTT---G 2492 Query 364751 CGCCCATGCCCACGGCTTCTACTGCACAGATCCTCGGAAACAACGAGTGCTTCGAACCGT 364810 | || ||||| || || ||| | ||||| || || ||||||||||||||||| || | Sbjct 2491 CTCCTATGCCTACTGCCAGTACCTCCCAGATTCTGGGCAACAACGAGTGCTTCGAGCCCT 2432 Query 364811 TTACAAGCAATCTTTATTCACGCCGGGTTCTTTCCGGAGAATTTCCGGTAGTTAATAAGT 364870 || ||| | || ||| || ||||| | || || || | ||| || || | Sbjct 2431 ACACCTCCAACATCTACCAACGACGTGTTCTCGCTGGTGAGTTCCAGGTTGTCAACCCCT 2372 Query 364871 ACCTAGTCAAGGATCTTTCCGACCGCGGGCTGTGGGGTGACAGCATGAAGAACTATATCA 364930 || ||||||| ||| |||| || |||||| || ||||||||| |||| Sbjct 2371 GGCTGCTCAAGGACCTTGTCGACATGGGTCTGTGGTCCGATGCTATGAAGAACCGCATCA 2312 Query 364931 TCGCCGCTAATGGTTCTGTGCAGAACATTCCAGGATTTCCAGAAGATCTGAAGCCTATTT 364990 | || | |||||||| | ||||||||||| | || | ||| | ||| || | | Sbjct 2311 TTGCTGAGAATGGTTCCATTCAGAACATTCCCAACATCCCTGCCGATGTCAAGGCTCTGT 2252 Query 364991 ACAAAACCGTATGGGAAATTTCCATGCGAACTCTCATTGATATGGCGGCCGATCGCGGTG 365050 | || ||||| ||||| || || ||| || || | ||||| || ||||| |||| Sbjct 2251 ATAAGACCGTTTGGGAGATCTCTCAGCGCCAAGTCGTTCAGATGGCTGCTGATCGAGGTG 2192 Query 365051 CTTTTATCTGTCAGAGCCAGTC 365072 | || || |||| |||||| Sbjct 2191 CCTTCATTGATCAGTCCCAGTC 2170 >seq18562 Length=18598 Score = 122 bits (134), Expect = 2e-22 Identities = 358/546 (66%), Gaps = 17/546 (3%) Strand=Plus/Plus Query 111345 TGGAAGGGAATTGTCGAAGAACTTCTGTGGTTTATTCGCGGAAGTACAAATGCAAATGAA 111404 |||||||| ||| | || || || ||||||||||| |||| |||||||| || ||| Sbjct 12282 TGGAAGGGGATTTTGGAGGAGCTGCTGTGGTTTATCAACGGATCCACAAATGCTAAAGAA 12341 Query 111405 CTTGCAGCAAAAAATGTAAAAATTTGGGATGGAAATGGATCACGTGACTTTCTAGATTCA 111464 || || | | || ||||| ||||||| ||||| || |||||||| || ||| Sbjct 12342 CTGTCAACCAGGGGAGTGAAAATCTGGGATGCCAATGGGTCTCGTGACTTCCTGGATGGC 12401 Query 111465 GTTGGTCTTGTCGA-CAACGAAGAAGGTGATCTCGGACCAGTTTACGGATTTCAATGGCG 111523 |||| || || | || |||| || ||| | || |||||||| || ||||| ||| | Sbjct 12402 CTTGG-ATTCTCTAGCAGAAAAGAGGGGGATTTAGGCCCAGTTTA-GGCTTTCAGTGGAG 12459 Query 111524 CCACTTTGGTGCAGACTACAAAACCATGCACGACTCATATGATTCA---CAGGGAACTGA 111580 || ||||| ||||| ||||||| ||| || ||| || ||||| || ||| | Sbjct 12460 GCATTTTGGGGCAGAATACAAAAATATG---GATTCAGATTATTCAGGTCAAGGAGTGGG 12516 Query 111581 TCAATTACAGAATGTCATTGATCAAATTAAGAACAACCCAACTTCTCGTCGCATTATTAT 111640 ||| | || || || ||||| || || | ||| || ||| | | || ||| | Sbjct 12517 CCAACTGCAAAAGGTGATTGACATGATCAAAACCAAACCTACTGACAGAAGAATCATTCT 12576 Query 111641 GAGTGCATGGAACCCAAATGCATTGGAAAAAATGGCACTTCCACCATGTCATCTTATGTG 111700 | |||| ||||| ||||| | | ||||| || || ||||| ||| | || Sbjct 12577 GTGTGCTTGGAATCCAAAAGATCTTCCTTTCATGGCCCTACCTCCATGCCATGCCCTTTG 12636 Query 111701 CCAGTTTTA--TGTACACG------ACGGGATGCTTTCATGCCAAATGTATCAGCGATCT 111752 |||||| || ||| ||| | ||| ||| || ||||| | || ||| | || Sbjct 12637 CCAGTTCTACGTGTCTACGTGATGAATGGGGAGCTGTCCTGCCAGCTATACCAGAGGTCA 12696 Query 111753 GCTGATATTGGTCTTGGTGTTCCGTTTAATATTGCAAGTTACGCACTACTTACTTGCTTA 111812 || || || || || || | || || || || | || ||| | || || || | | Sbjct 12697 GCAGACATGGGCCTGGGCGCACCCTTCAACATCTCCAGCTACTCCCTGCTCACCCACATG 12756 Query 111813 ATCGCTCATTTTACAAATCTCAAACCGGGTGAATTCATTCACGTTATCGGAGATGCGCAT 111872 ||||| || | | || || || ||||| || | ||| | | |||||||| || Sbjct 12757 ATCGCACACATCATGGGCCTAAAGCCAGGTGACTTTGTACACACTTTGGGAGATGCACAC 12816 Query 111873 GTTTAC 111878 |||||| Sbjct 12817 GTTTAC 12822 >seq96587 Length=11614 Score = 89.7 bits (98), Expect = 1e-12 Identities = 219/331 (66%), Gaps = 1/331 (0%) Strand=Plus/Plus Query 364750 GCGCCCATGCCCACGGCTTCTACTGCACAGATCCTCGGAAACAAC-GAGTGCTTCGAACC 364808 || || ||||| | ||||| ||||| ||||| || | ||| || |||| | | ||| | Sbjct 3124 GCCCCGATGCCTATTGCTTCCACTGCTCAGATTCTGGAAAATAAGTGAGTCCATTGAATC 3183 Query 364809 GTTTACAAGCAATCTTTATTCACGCCGGGTTCTTTCCGGAGAATTTCCGGTAGTTAATAA 364868 | ||| ||||| | || | || | | | || |||||||||| ||| || ||| Sbjct 3184 TTATACCAGCAACATCTACACTTGCAGAGCCTTGTCAGGAGAATTTCAGGTTGTAAATCC 3243 Query 364869 GTACCTAGTCAAGGATCTTTCCGACCGCGGGCTGTGGGGTGACAGCATGAAGAACTATAT 364928 || || | | ||||| | || | || ||||| ||| ||||| || | || Sbjct 3244 TCACTTACTGAGAGATCTCACTGAGTGGGGCTTGTGGAATGAAGAGATGAAAAATCAGAT 3303 Query 364929 CATCGCCGCTAATGGTTCTGTGCAGAACATTCCAGGATTTCCAGAAGATCTGAAGCCTAT 364988 || || ||||| ||| | |||| ||| |||| | || || || ||||||| | Sbjct 3304 TATTGCATGCAATGGCTCTATTCAGAGCATACCAGAAACTCTGGACGACCTGAAGCAACT 3363 Query 364989 TTACAAAACCGTATGGGAAATTTCCATGCGAACTCTCATTGATATGGCGGCCGATCGCGG 365048 ||| || || ||||||||||| || | |||| | | | ||||| || ||| | || Sbjct 3364 TTATAAGACTGTATGGGAAATCTCTCAGAAAACTGTTCTCAAGATGGCAGCTGATGGAGG 3423 Query 365049 TGCTTTTATCTGTCAGAGCCAGTCGTTTAAC 365079 ||||| || |||| | |||||| || ||| Sbjct 3424 CGCTTTCATTGGTCAAAACCAGTCTTTGAAC 3454 >seq124664 Length=7731 Score = 86.0 bits (94), Expect = 2e-11 Identities = 107/147 (73%), Gaps = 0/147 (0%) Strand=Plus/Minus Query 363838 GGGGCGTTTGCTATGTATCTCGAGCCTCATCATGCCGATATTTTTGAGTTTCTTGAGCTC 363897 || || |||||||| || || |||||| ||| | || || |||||||||||||| | Sbjct 2299 GGAGCATTTGCTATTTACCTGGAGCCTTGGCATTCAGACATCTTTGAGTTTCTTGATTTA 2240 Query 363898 CGGAAAAACACGGGAAAAGAGGAATTGCGTGCACGTGATCTGTTCTATGCACTTTGGGTT 363957 ||| ||||| ||||| || || |||||| | || || |||| ||| |||||| || Sbjct 2239 AAGAAGAACACAGGAAAGGAAGAGCAGCGTGCCAGGGACCTTTTCTTTGCCCTTTGGATT 2180 Query 363958 TCTGACCATTTTATGAAGCGCGTGGAG 363984 | || | || ||||| || |||||| Sbjct 2179 CCAGATCTCTTCATGAAACGAGTGGAG 2153 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1300391142027582