Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pteronotus_20parnellii_20[genbank_20GCA_5F000465405.1_202013-09-13] 177,401 sequences; 1,960,317,893 total letters Query= NC_007710.1 Length=46643 Score E Sequences producing significant alignments: (Bits) Value seq96522 549 6e-152 seq133931 453 3e-123 seq87209 127 6e-25 >seq96522 Length=1445 Score = 549 bits (608), Expect = 6e-152 Identities = 664/900 (74%), Gaps = 8/900 (1%) Strand=Plus/Minus Query 455 CGAAGACGTTATCGGCGGCGTAGCCTTCGAGCCTCACCCCCGAAGGGTAGAGCCCTTCGA 514 |||| ||||| ||||||||||| || | ||| |||| || |||||||| ||||| | Sbjct 1445 CGAACACGTTGTCGGCGGCGTAACCCTGGAGGGTCACGCCATTGGGGTAGAGGCCTTCCA 1386 Query 515 CGGTGATGATCAAGGACGAGTTTGCGACAGTGAGAGTACCAGCCATGAGTGTTGGTCCTT 574 |||| || | | || || || ||||| || || || | |||||| | | ||||| Sbjct 1385 CGGTCATCACGATCGAGGAATTGGCGACGGTCAGGGTTGCGGCCATGGTCGCTTCTCCTT 1326 Query 575 AAATGACAGTAGTGGCGGATACGACGACGCGCTGGATGCTACCACCGTCGCAGTACCAGA 634 | | ||| || |||| || ||||| | ||||||||| || || ||||||||||||| Sbjct 1325 ACAGGACGGTGGTGGAAGACACGACAATCTTCTGGATGCTGCCGCCATCGCAGTACCAGA 1266 Query 635 AATTAACGGTCGGCGACCCACGGTCGGTACGCACGGTCGTCGTGATCGGATCGATAACCT 694 | || |||||||| || || || ||||| ||||||||||| ||| |||| ||| | |||| Sbjct 1265 AGTTGACGGTCGGTGAGCCGCGCTCGGTGCGCACGGTCGTGGTGGTCGGGTCGGTGACCT 1206 Query 695 GCAAGTACCAGCCCTTGTCGACCACGTCGCCGGAGATCGGAACGCCTGCTGCCTGATCGA 754 ||| |||||||||||||||| || ||||||| ||| | || ||| || ||| |||| Sbjct 1205 GCAGGTACCAGCCCTTGTCGCTGACCTCGCCGGCGATGGCAAAGCCGGCCTGCTGGTCGA 1146 Query 755 TTTGCGCGCGCTGAGAAGCACTCAACGCCACGCCCGCACGAATCACGCCAGCCGCGACGA 814 | ||||| ||||| || | |||| | ||||| || || || ||||| ||| | || Sbjct 1145 TCTGCGCACGCTGCGACGGGCTCAGGGTGACGCCTGCGCGGATTACGCCGGCCAGAAGGA 1086 Query 815 ACTGCGAGACCACGTCTTGCGCGCCCTGATACAGCGCATTGTAACCGTCGGCGTTGTACG 874 |||| || ||||| || |||||||| || | ||| |||| ||||| |||||||| | Sbjct 1085 ACTGGCTGATGACGTCCTGTGCGCCCTGGTAGATGGCAGTGTAGCCGTCAGCGTTGTAGG 1026 Query 875 GCAGCGAACGGTACGCCAACAGGGTCTCGAACAGCGCCTGTTGCAGGTTACGACGCAACG 934 ||||||||||||| |||| ||||||||| ||||||||||| |||||||| || |||| || Sbjct 1025 GCAGCGAACGGTAGGCCAGCAGGGTCTCAAACAGCGCCTGCTGCAGGTTGCGGCGCAGCG 966 Query 935 CGATCCAGCCGAGCGCGGTGTCGGCCCACAGGAACTGCCCGCCGATTGCGCCATTATACG 994 ||||| ||| || ||||| ||||||||| |||| |||||||| | || || || | Sbjct 965 CGATCTGGCCCAGGGCGGTATCGGCCCACTCGAACACGCCGCCGATCGACCCGTTGTAGG 906 Query 995 TGACGGTGTAGGTGTTAGTGGCCGACGCGTACTTGCCCAGGTAGGTGTAGCCGTTGGACA 1054 | |||||||||||||| | | | |||| ||||||||||||||||||||||||||||||| Sbjct 905 TCACGGTGTAGGTGTTCGGGCCGGACGAATACTTGCCCAGGTAGGTGTAGCCGTTGGACA 846 Query 1055 GGAGCGCGTTAGCGTTGGCCAGGTTATCGACGCGCACACCGGCCGACGACA-CGGGCGAA 1113 | ||||| | || | | |||| ||||| | | |||||||| |||| |||||| Sbjct 845 GCAGCGCTTCGGCATCGTCCAGCGAGTCGACCTGGATGCCGGCCGAGGACACCGGGCG-C 787 Query 1114 CGCAGAGCGAGCGTTGTACGACCCTCCGCAATCTGCAAGTTAGTCGATGCGCCCCACGCC 1173 || | || ||||| || || || ||| | ||||||| ||| ||||| |||||||| ||| Sbjct 786 CGGAATGCCAGCGTGGTGCGGCCTTCCACGATCTGCAGGTTGGTCGAGGCGCCCCAGGCC 727 Query 1174 AGCACGATCATCGCGTTTGCGAGCAAGCCATAAACCGGGATCGTGTTGCTGAACGGAGTC 1233 || |||||||| ||||| || || ||| || || || | || || | | || | Sbjct 726 AGAACGATCATGGCGTTGGCCAGGTTGCCGTAGACTGGCACGGTATTCTGGTAGGGCTGC 667 Query 1234 GTCTTGACGATGTTGCCAAAGCTCGACACGTT---GTTGACCGACAGACCGGCGGCATCC 1290 | | || | |||||| ||| | | | ||| |||||| ||| || || | || Sbjct 666 GAATGCACCAGGTTGCCGAAGTTGGCCGGGTTGTCGTTGAC---CAGGCCCGCCGGGTCG 610 Query 1291 TGATCCCACGCGGCGTAAATGCGGCGGAAGACCTGATCGGACGTCCACTGCGCAAGCGCG 1350 ||||| ||||||| ||| | |||| |||| |||| |||||||| |||| |||| Sbjct 609 GAGTCCCAGCCGGCGTAGATGTAGTTGAAGGCCTGCTCGGCCGTCCACTCGGCAAACGCG 550 >seq133931 Length=11104 Score = 453 bits (502), Expect = 3e-123 Identities = 371/451 (82%), Gaps = 0/451 (0%) Strand=Plus/Plus Query 35441 TTGCAGGTGAAGTTGCTCGACCCGCGTTTCGGCGATCTGTGGCCGTTGCCGGCCTATGCC 35500 |||||||| || ||||||| ||||| |||||||| |||||| ||||||| |||||| Sbjct 6337 TTGCAGGTCAAACTGCTCGATCCGCGCTTCGGCGACAGCTGGCCGCTGCCGGCGTATGCC 6396 Query 35501 ACCGAAGCCAGTGCAGGCATGGACCTGCGTGCCGCACTGGAGGCGCCGATGACGTTGCAG 35560 ||||| |||||||| |||||||||||||| || |||||||| | || |||| |||||| Sbjct 6397 ACCGAGGCCAGTGCCGGCATGGACCTGCGCGCAGCACTGGACACCGCGCTGACTTTGCAG 6456 Query 35561 CCGGGCGATGCGGCGCTGATTCCCAGCGGCATCGCGATCCATCTGGCCGACCCGCAGCTG 35620 ||||||||| | |||||| ||||||| ||| | || ||||| | ||||| ||||| ||| Sbjct 6457 CCGGGCGATACCGCGCTGGTTCCCAGTGGCCTGGCCATCCACATTGCCGATCCGCACCTG 6516 Query 35621 TGCGCGGTGATCCTGCCGCGCTCGGGGCTTGGCCATCGTCACGGCATCGTACTCGGCAAC 35680 |||||||| ||||||||||| ||||| || |||||||| ||||||||||| ||||||||| Sbjct 6517 TGCGCGGTCATCCTGCCGCGTTCGGGCCTGGGCCATCGCCACGGCATCGTCCTCGGCAAC 6576 Query 35681 GGTACCGGCCTCATCGATGCGGATTACCAGGGGTCGTTGTTGATCAGCACCTGGAATCGC 35740 || |||||||||||||| || || |||||||| || || |||||||| |||||| || Sbjct 6577 GGCACCGGCCTCATCGACGCCGACTACCAGGGTCCGCTGCTGATCAGCGTCTGGAACCGG 6636 Query 35741 GGCCGCGAGGCCTTCACCATCGAGCCGGGCGACCGGATTGCGCAGCTGGTGATCCTGCCG 35800 ||||||||||||||||| ||||||||||| ||||| || |||||||||||| | | ||| Sbjct 6637 GGCCGCGAGGCCTTCACGATCGAGCCGGGTGACCGCATCGCGCAGCTGGTGGTGGTTCCG 6696 Query 35801 GTCGTGCGCGTAGGCTTGCGAGTGGTGGACACTTTCGTCGACAGCGCGCGCGGCGCGGGT 35860 | | ||||| || ||| |||||||| |||||| |||||||| ||| || ||||| Sbjct 6697 ATTGCCCGCGTCAGCCTGCAGGTGGTGGATACTTTCACCGACAGCGTGCGGGGAACGGGT 6756 Query 35861 GGATTCGGTCACACCGGCGTGCGCTGACTGG 35891 |||||||| || ||||| ||||| |||| || Sbjct 6757 GGATTCGGCCATACCGGGGTGCGTTGACGGG 6787 >seq87209 Length=1003 Score = 127 bits (140), Expect = 6e-25 Identities = 217/312 (70%), Gaps = 2/312 (1%) Strand=Plus/Minus Query 26717 TCCAACCACGTGGCGCGCGCAAGGTCCGTACCGGTCTT-GATCAGCGTTACTTCGACGCC 26775 |||| |||||| || || || ||||| | || ||||| | ||| | | |||| ||| Sbjct 1003 TCCAGCCACGTCGCACGGGCCAGGTCGGGCCCAGTCTTAGCCCAGACT-AGATCGATGCC 945 Query 26776 GTCCGGGCGACGCACCTTGTTGGCCGACATAAACCCGCCAGCCTCGATGGGATAATCGGT 26835 ||| || || |||||||||||||| | | || |||||| ||| || |||| Sbjct 944 GTCGGGCCGGCGCACCTTGTTGGCGCTGGTGTAGCCCGTGTCCTCGACGGGGTAGTCGGA 885 Query 26836 CGTCTGGTACTCGGCAAAATGCAGCGTCATCTCGCCCCAGCTATCGGGGATCGTGAGCGG 26895 |||||| | ||||| || || || ||||| |||||| || |||| || | || Sbjct 884 GGTCTGGAAGTCGGCGAAGCGCTCGGTGATCTCCAGCCAGCTGTCCGGGACAGTCAAGGG 825 Query 26896 CAGACCGGTGTCGGCGTTGATGATCGCATAGAGCGGGGTCGGTGGATTGATTTTCGGCAA 26955 | ||| ||||||||||||||||| |||| ||| ||| || |||| || |||| Sbjct 824 TACGAAGGTCTCGGCGTTGATGATCGCGTAGATCGGTCGCGGCGGGTTGAACTTGGGCAG 765 Query 26956 ATTTTTTGCGATCAGCGATACGACGTTGAGGACCGCCGCCGGGGTCAGCGATGCCGACGG 27015 || || ||||||||| ||| |||| | ||| || ||||| ||| || |||| ||| Sbjct 764 GTTCTTGCTGATCAGCGAGACGGCGTTCAAGACGGCTGCCGGCAGCAGTGACGCCGTCGG 705 Query 27016 CAGTTGCGTCGG 27027 ||| | ||||| Sbjct 704 CAGCTTGGTCGG 693 Score = 120 bits (132), Expect = 9e-23 Identities = 166/232 (72%), Gaps = 3/232 (1%) Strand=Plus/Minus Query 6982 GCGAGCTCGCCCGACTGTACGTAGTCGATGGCTTGGCGATCCATGATCAACAGATCGGCG 7041 || ||||| ||||| || | ||||||||| || || ||| || || ||| || || Sbjct 325 GCCAGCTCCCCCGATTGGATGTAGTCGATCGCCTGCTTGTCCCAGACCAGCAGGTCCGCC 266 Query 7042 CGCATTTGACCGTTTACGTAGCGCACGTCGTACACGGTACCGCCGACGTATTCTTTCTGC 7101 ||| || || ||| || | || | | | ||| ||||||||| |||||| || || Sbjct 265 AGCAGTTTGCCATTTTCGAAACGGGCATTGCCGACGCTACCGCCGATGTATTCCTTGCGC 206 Query 7102 GGCGATTCCGCAGTCTGCGCGACGTGTCTGATCATCAGCGGT---CCGTTGAACGTCGTG 7158 || || || ||||| |||| ||| | ||||||| |||| |||||||| |||| Sbjct 205 GGTTCGTCGGCCGTCTGGGCGATGTGCCGAATCATCAACGGTAGACCGTTGAAGGTCGGC 146 Query 7159 GCAGCGCGTTCAAGTTCCACCGGATCGCGGTACATGTCGTAGACCTTGTCGG 7210 |||||||||||||| || | || |||||||| | ||| |||||| ||| || Sbjct 145 GCAGCGCGTTCAAGCTCGGCGGGGTCGCGGTAGAGGTCATAGACCGTGTTGG 94 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 148821824603010