Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pteronotus_20parnellii_20[genbank_20GCA_5F000465405.1_202013-09-13] 177,401 sequences; 1,960,317,893 total letters Query= NC_007921.1 Length=147544 Score E Sequences producing significant alignments: (Bits) Value seq161317 116 3e-21 seq94837 111 1e-19 seq79216 107 2e-18 seq97981 91.5 1e-13 seq548 91.5 1e-13 seq104034 84.2 2e-11 seq79482 82.4 7e-11 >seq161317 Length=2104 Score = 116 bits (128), Expect = 3e-21 Identities = 145/199 (73%), Gaps = 0/199 (0%) Strand=Plus/Plus Query 131038 GTCGACTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCCT 131097 || |||||||| |||||||||||||| | ||||| |||||| ||||||||||| Sbjct 1846 GTGGACTCCTTCTGAATGTTGTAATCAGAGAGAGTGCGGCCGTCCTCAAGCTGCTTGCCG 1905 Query 131098 GCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATTTTCTGCTTG 131157 ||| | || || || |||||||| || ||||| || || ||||| || || |||| Sbjct 1906 GCGAAAATCAAGCGTTGCTGGTCGGGGGGGATGCCCTCCTTGTCCTGAATCTTGGACTTG 1965 Query 131158 AGCTGCTCCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTACCGGTTAGAGTT 131217 | | || | ||| |||| ||||| | |||| ||| | ||| || ||||| | || Sbjct 1966 ACATTGTCGATAGTGTCGGAAGACTCAACCTCGAGGGTGATGGTCTTGCCGGTCAAGGTC 2025 Query 131218 TTTACGAAAATCTGCATGA 131236 || ||||| |||||||||| Sbjct 2026 TTGACGAAGATCTGCATGA 2044 Score = 114 bits (126), Expect = 1e-20 Identities = 162/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066 ||||||||| | || || || | || | || |||||||| ||||||||||| ||||| Sbjct 1077 GCCACCGCGAAGTCGGAGAACGAGGTGAAGAGTTGACTCCTTCTGAATGTTGTAGTCGCT 1136 Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126 | |||||| || || | |||||| || ||| |||| | |||||| || || || || Sbjct 1137 TAAGGTGCGACCATCTTCCAACTGCTTACCAGCGAAGATAAGACGCTGTTGATCAGGGGG 1196 Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186 || || || ||||| || || ||| | | || | ||| || ||||||||| Sbjct 1197 AATACCCTCCTTGTCCTGAATCTTGCTCTTCACGTTGTCGATAGTGTCACTGGACTCGAC 1256 Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | ||| | ||| || ||||| ||||| || || ||||||||||| Sbjct 1257 CTCAAGGGTGATGGTCTTTCCGGTGAGAGTCTTCACAAAAATCTGCAT 1304 Score = 89.7 bits (98), Expect = 5e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| || | ||| || || || || | || || ||||| ||||||||||| ||| Sbjct 1306 CCACCACGAAGACGGAGAACCAAGTGGAGAGTAGATTCCTTCTGAATGTTGTAGTCGGAA 1365 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | || || || || || |||||||| ||| |||| | ||||| || || ||||| Sbjct 1366 AGAGTTCGGCCATCTTCAAGTTGCTTGCCAGCGAAGATGAGTCGCTGTTGATCGGGAGGA 1425 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || || || ||||| ||| || ||| | | || | ||||||| ||||||| Sbjct 1426 ATACCCTCCTTGTCCTGGATCTTGCTCTTCACATTATCAATGGTATCGGATGACTCGACT 1485 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | |||| ||| || || || || || || ||||| || ||||| Sbjct 1486 TCCAGAGTAATGGTCTTTCCAGTGAGGGTCTTGACGAAGATTTGCAT 1532 Score = 84.2 bits (92), Expect = 2e-11 Identities = 151/218 (69%), Gaps = 2/218 (1%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| || | || || || | ||| | ||| || ||||| ||||||||||| ||| Sbjct 1534 CCACCACGGAGGCGGAGGACGAGATGAAGGGTAGATTCCTTCTGAATGTTGTAGTCGGCA 1593 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||| || || || || ||||| || || |||| | ||||||||||| |||||| Sbjct 1594 AGGGTTCGGCCATCTTCGAGTTGCTTTCCAGCAAAGATCAGGCGCTGCTGGTCAGGAGGG 1653 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTG-CTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186 || || || ||||| ||| | | || ||| | | || | ||||||| ||||||| Sbjct 1654 ATGCCCTCCTTGTC-CTGAATCTTTGACTTAACATTGTCGATGGTATCGGACGACTCGAC 1712 Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGA 131224 || | || | ||| || || || || || || |||| Sbjct 1713 CTCAAGAGTGATGGTCTTGCCAGTGAGGGTCTTGACGA 1750 >seq94837 Length=4094 Score = 111 bits (122), Expect = 1e-19 Identities = 139/191 (73%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 131044 TCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAG 131103 ||||| || |||||||| ||||||| |||||| ||||| ||||||||||| || || Sbjct 4094 TCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGTCCATCCTCGAGCTGCTTGCCAGCAAAG 4035 Query 131104 ATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGC 131163 || | ||||||||||| || ||||| || || ||||| ||| || ||||| | Sbjct 4034 ATGAGTCGCTGCTGGTCAGGGGGGATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTTG 3975 Query 131164 TCCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACG 131223 || | || |||| ||||| | || | ||| | || || || || || || || ||| Sbjct 3974 TCGATGGTGTCGGAAGACTCCACCTCAAGGGTGATCGTCTTCCCCGTGAGGGTCTTGACG 3915 Query 131224 AAAATCTGCAT 131234 ||||||||||| Sbjct 3914 AAAATCTGCAT 3904 >seq79216 Length=33065 Score = 107 bits (118), Expect = 2e-18 Identities = 161/229 (70%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 131006 AGCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGC 131065 ||||||| | || ||||| || | || | ||| ||||| || || |||||||| || Sbjct 3405 AGCCACCTCTCAGGCGCAGGACCAGGTGCAGGGTGGACTCTTTCTGGATGTTGTAGTCAG 3464 Query 131066 TCATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAG 131125 | ||||| ||||| |||||||||||||| |||| | | ||||||||| || | Sbjct 3465 AAAGAGTGCGGCCATCCTCCAGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTCGGGGG 3524 Query 131126 GGATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGA 131185 |||| |||||||| || ||| || ||| | | ||| | || ||| | | ||| | Sbjct 3525 GGATGCCTTCTTTATCCTGGATCTTGGCCTTCACATTCTCAATGGTGTCGCTCGGCTCCA 3584 Query 131186 TGTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | ||| | ||| || ||||| || || || ||||| |||||||| Sbjct 3585 CCTCCAGGGTGATGGTCTTGCCGGTCAGGGTCTTCACGAAGATCTGCAT 3633 Score = 86.0 bits (94), Expect = 6e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| | || ||||| || | || | ||| ||||| || || |||||||| || Sbjct 3635 CCACCTCTCAGGCGCAGGACCAGGTGCAGGGTGGACTCTTTCTGGATGTTGTAGTCAGAA 3694 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||||| || || |||||||||||||| |||| | | ||||||||| || ||| Sbjct 3695 AGAGTGCGGCCATCTTCCAGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTCTGGGGGG 3754 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || ||||| || || ||| || || | | ||| | || ||| ||| ||| | Sbjct 3755 ATGCCTTCCTTATCTTGGATCTTGGCTTTCACATTCTCAATGGTGTCGCTGGGCTCCACC 3814 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | ||| | ||| || || || || || || || || |||||||| Sbjct 3815 TCCAGGGTGATGGTCTTGCCTGTCAGGGTCTTCACAAAGATCTGCAT 3861 >seq97981 Length=9611 Score = 91.5 bits (100), Expect = 1e-13 Identities = 162/235 (69%), Gaps = 1/235 (0%) Strand=Plus/Plus Query 131001 CCATGA-GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGT 131059 |||||| |||||| | || ||| ||||| || || | ||| ||||| || |||||||||| Sbjct 2461 CCATGACGCCACCCCACAGACGAAGCACCAACTGCAGGGTGGACTCTTTCTGAATGTTGT 2520 Query 131060 AATCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGT 131119 | || | || || || ||||| |||||||| | | | ||||||||||| Sbjct 2521 AGTCTGAAAGAGTATAATCATCTTCCAGCTGTTTGCCTGCAAAAACCAGACGCTGCTGGT 2580 Query 131120 CCGGAGGGATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGG 131179 | | |||||| || || ||||| |||||| |||| ||| | || || ||| Sbjct 2581 CAGAAGGGATGCCCTCCTTGTCTTGGATTTTAGCTTTGACAATCTCAATGGTGTCACTGG 2640 Query 131180 ACTCGATGTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 ||| | |||| ||| | ||| || || || || || ||| | || |||||||| Sbjct 2641 GCTCAACCTCGAGGGTGATGGTCTTGCCAGTCAGGGTCTTTGCAAAGATCTGCAT 2695 >seq548 Length=19863 Score = 91.5 bits (100), Expect = 1e-13 Identities = 159/229 (69%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066 || ||| | || ||| ||||| || || | ||| ||||| || ||||||||||| || Sbjct 10983 GCTACCCCACAGACGAAGCACCAAGTGCAGGGTGGACTCTTTCTGAATGTTGTAGTCCGA 10924 Query 131067 CATGGTGC-GCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAG 131125 | |||| || | ||||| ||||| ||||| | | || | | ||||||||| || | Sbjct 10923 GAGAGTGCAGCCA-TCCTCCAGCTGTTTGCCCACAAACATCAGTCACTGCTGGTCAGGTG 10865 Query 131126 GGATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGA 131185 |||| || || ||||| |||||| |||| | ||| | || || ||| ||||| Sbjct 10864 GGATGCCCTCCTTGTCTTGGATTTTAGCTTTGACATTCTCAATGGTGTCACTGGGCTCGA 10805 Query 131186 TGTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | ||| | ||| || || || || || || || || |||||||| Sbjct 10804 CCTCAAGGGTGATGGTCTTGCCAGTCAGGGTCTTCACAAAGATCTGCAT 10756 >seq104034 Length=7476 Score = 84.2 bits (92), Expect = 2e-11 Identities = 159/233 (68%), Gaps = 1/233 (0%) Strand=Plus/Minus Query 131003 ATGA-GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAA 131061 |||| |||||| |||| | | ||||| || || | || ||||| || |||||| |||| Sbjct 2090 ATGATGCCACCACGCAGATGAAGCACCAAGTGCAGTGTGGACTCTTTCTGAATGATGTAG 2031 Query 131062 TCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCC 131121 || | ||||| || || ||||| | |||||| | || | ||||||||||| Sbjct 2030 TCCAGGAGAGTGCGGCCATCTTCCAGCTGTTGGCCTGCAAAAATCAGTCGCTGCTGGTCA 1971 Query 131122 GGAGGGATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGAC 131181 || ||||| || || |||| ||||||| |||| | ||| || || ||| | Sbjct 1970 GGCGGGATGCCCTCCTTGTTTTTGATTTTAGCTTTGACATTCTCAGTGGTGTCACTGGGC 1911 Query 131182 TCGATGTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | || | ||| | ||| || || || || || || || || |||||||| Sbjct 1910 TCAACCTCAAGGGTGATGGTCTTGCCAGTCAGGGTCTTCACAAAGATCTGCAT 1858 >seq79482 Length=29390 Score = 82.4 bits (90), Expect = 7e-11 Identities = 155/227 (68%), Gaps = 1/227 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 || || | ||| ||||| || | || | || ||||| || || |||||||| | | | Sbjct 9773 CCTCCCCTCAAGCGCAGGACCAGGTGCAGAGTAGACTCTTTCTGGATGTTGTACTTGGAC 9714 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | | || || || || |||||||| || ||| |||| | ||||||||||| || ||| Sbjct 9713 AGGATGTGCCCATCTTCCAGCTGCTTCCCAGCGAAGATCAGCCGCTGCTGGTCAGG-GGG 9655 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 | || || ||||| || || ||||| | ||| | || || ||| || || Sbjct 9654 GTGCCCTCCTTGTCTTGTATCTTGGCCTTGACATCCTCAATGGTGTCACTGGGCTTGACC 9595 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | ||| | ||| || || || || || || ||||| |||||||| Sbjct 9594 TCCAGGGTGATGGTCTTGCCAGTCAGGGTCTTCACGAAGATCTGCAT 9548 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 470966105715840