Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pteronotus_20parnellii_20[genbank_20GCA_5F000465405.1_202013-09-13]
177,401 sequences; 1,960,317,893 total letters
Query= NC_008168.1
Length=104710
Score E
Sequences producing significant alignments: (Bits) Value
seq138381 123 2e-23
seq161317 116 2e-21
seq146406 113 3e-20
seq85459 109 4e-19
seq58935 107 1e-18
seq28393 91.5 1e-13
seq79216 89.7 3e-13
seq174782 87.8 1e-12
seq104553 87.8 1e-12
seq39780 82.4 5e-11
seq21029 82.4 5e-11
seq8831 82.4 5e-11
>seq138381
Length=11663
Score = 123 bits (136), Expect = 2e-23
Identities = 79/86 (92%), Gaps = 5/86 (6%)
Strand=Plus/Plus
Query 25911 CCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGTTAATCCTTT 25965
||||||||||||||||||||||||||||||||||| || |||||||||||||| ||
Sbjct 1796 CCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATT 1855
Query 25966 CATGCGCGTCACTAATTAGATGACGA 25991
||||||||||||||||||||||||||
Sbjct 1856 CATGCGCGTCACTAATTAGATGACGA 1881
>seq161317
Length=2104
Score = 116 bits (128), Expect = 2e-21
Identities = 148/204 (73%), Gaps = 0/204 (0%)
Strand=Plus/Plus
Query 38115 TGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGACAAAACACGTTCGTCGTCTAATTGT 38174
||||||||| |||||| ||||| ||||||||||| | | || |||| || | ||
Sbjct 1840 TGAAGAGTGGACTCCTTCTGAATGTTGTAATCAGAGAGAGTGCGGCCGTCCTCAAGCTGC 1899
Query 38175 TTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGGACGCCTTCTTTGTCCATAATTTTT 38234
|| ||||| || || | |||||| || |||| ||||| ||| || |||||| ||| ||
Sbjct 1900 TTGCCGGCGAAAATCAAGCGTTGCTGGTCGGGGGGGATGCCCTCCTTGTCCTGAATCTTG 1959
Query 38235 TGCTTCACATTCTGGACAGTATCTCCACTTTCAACTTCTAATGTAATAGTTTTACCCGTC 38294
||| ||||| | || ||| || | ||||| || | || || || || || |||
Sbjct 1960 GACTTGACATTGTCGATAGTGTCGGAAGACTCAACCTCGAGGGTGATGGTCTTGCCGGTC 2019
Query 38295 AAGGTTTTCACGAATATCTGCATG 38318
||||| || ||||| |||||||||
Sbjct 2020 AAGGTCTTGACGAAGATCTGCATG 2043
>seq146406
Length=1016
Score = 113 bits (124), Expect = 3e-20
Identities = 79/90 (88%), Gaps = 5/90 (6%)
Strand=Plus/Minus
Query 25907 CGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGTTAATC 25961
||||||||||||||||||||| || || ||||| ||||| || |||||||||||||
Sbjct 95 CGTTCCCTTGGCTGTGGTTTCACTGGAGAGTAGGTAGGGACAGTGGGAATCTCGTTAATC 36
Query 25962 CTTTCATGCGCGTCACTAATTAGATGACGA 25991
| ||||||||||||||||||||||||||||
Sbjct 35 CATTCATGCGCGTCACTAATTAGATGACGA 6
>seq85459
Length=12966
Score = 109 bits (120), Expect = 4e-19
Identities = 81/95 (85%), Gaps = 5/95 (5%)
Strand=Plus/Minus
Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956
||||||||||||||||||||||||| ||| || ||||| ||||| || |||||| |
Sbjct 12736 AAGCCCGTTCCCTTGGCTGTGGTTTTGCTGGAGAGTAGGTAGGGACAGTGGGAATCTCTT 12677
Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991
| |||| ||||||||| ||||||||||||||||||
Sbjct 12676 TCATCCATTCATGCGCATCACTAATTAGATGACGA 12642
>seq58935
Length=21258
Score = 107 bits (118), Expect = 1e-18
Identities = 70/77 (91%), Gaps = 0/77 (0%)
Strand=Plus/Plus
Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006
|||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||
Sbjct 18380 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTTACGGTACTTGTTGGCTATCGGTCTCGT 18439
Query 20007 GGTAATATTTAGCCTTA 20023
| ||||||||||||
Sbjct 18440 GCCGGTATTTAGCCTTA 18456
>seq28393
Length=2239
Score = 91.5 bits (100), Expect = 1e-13
Identities = 76/93 (82%), Gaps = 5/93 (5%)
Strand=Plus/Minus
Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956
||||| |||||||||||||||||||| || || ||||| ||||| || |||||| |
Sbjct 1989 AAGCCAGTTCCCTTGGCTGTGGTTTCACTGGAGAGTAGGTAGGGACAGTGGGAATCTCAT 1930
Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGAC 25989
| |||| ||| || | |||||||||||||||||
Sbjct 1929 TCATCCATTCGTGTGTGTCACTAATTAGATGAC 1897
>seq79216
Length=33065
Score = 89.7 bits (98), Expect = 3e-13
Identities = 156/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 38091 CCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGAC 38150
|||||||||| |||| |||| || || ||| ||| || || || ||||| |||||
Sbjct 3407 CCACCTCTCAGGCGCAGGACCAGGTGCAGGGTGGACTCTTTCTGGATGTTGTAGTCAGAA 3466
Query 38151 AAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGG 38210
| | || | || || | || || || ||||| || || | || || |||| ||||
Sbjct 3467 AGAGTGCGGCCATCCTCCAGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTCGGGGGGG 3526
Query 38211 ACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAACT 38270
| ||||||||| ||| || || ||||||||||| | || || | || ||
Sbjct 3527 ATGCCTTCTTTATCCTGGATCTTGGCCTTCACATTCTCAATGGTGTCGCTCGGCTCCACC 3586
Query 38271 TCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317
|| | || || || || || |||| ||| |||||||| ||||||||
Sbjct 3587 TCCAGGGTGATGGTCTTGCCGGTCAGGGTCTTCACGAAGATCTGCAT 3633
>seq174782
Length=7384
Score = 87.8 bits (96), Expect = 1e-12
Identities = 104/141 (74%), Gaps = 0/141 (0%)
Strand=Plus/Plus
Query 38105 CAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGACAAAACACGTTCGTC 38164
||| || | ||||||||| |||||||||||| ||||| ||||||||| |||| | ||
Sbjct 127 CAATACAAGATGAAGAGTAGACTCCTTTTGAATGTTGTAGTCAGACAAAGTACGTCCATC 186
Query 38165 GTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGGACGCCTTCTTTGTC 38224
|| | ||| ||||| ||||| || || | ||| ||||| | || | ||||| || ||
Sbjct 187 TTCCAGTTGCTTTCCAGCAAAGATCAGTCTTTGCTGATCAGGAGGAATTCCTTCCTTATC 246
Query 38225 CATAATTTTTTGCTTCACATT 38245
| || || |||||||||
Sbjct 247 CTGGATCTTGGCCTTCACATT 267
>seq104553
Length=43841
Score = 87.8 bits (96), Expect = 1e-12
Identities = 147/213 (69%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 38105 CAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGACAAAACACGTTCGTC 38164
|||||| | ||||||||| |||||||||||| ||||| ||||||||| ||| | ||
Sbjct 35481 CAACACAAGATGAAGAGTAGACTCCTTTTGAATGTTGTAGTCAGACAAAGTACGCCCATC 35540
Query 38165 GTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGGACGCCTTCTTTGTC 38224
|| | ||| || || ||||| || || ||| ||||| | || | ||||| || ||
Sbjct 35541 TTCCAGTTGCTTGCCAGCAAAGATCAGTTTTTGCTGATCAGGAGGAATTCCTTCCTTATC 35600
Query 38225 CATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAACTTCTAATGTAATAGT 38284
| || | |||||||||| | | ||||| |||| | || | | || ||
Sbjct 35601 CTGGATCTCGGGCTTCACATTTTCTATTGTATCCGAGGGTTCAGCCTCGAGAGCGATGGT 35660
Query 38285 TTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317
|| || | | |||| ||||||| ||||||||
Sbjct 35661 CTTCCCTATAAGGGTTGTCACGAAAATCTGCAT 35693
>seq39780
Length=11133
Score = 82.4 bits (90), Expect = 5e-11
Identities = 63/75 (84%), Gaps = 0/75 (0%)
Strand=Plus/Minus
Query 19949 CTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGCGG 20008
|||||||||||| ||||||||||||||||| || ||||||||| || | ||| || |
Sbjct 9400 CTCTCTTCAAAGCTCTTTTCAACTTTCCCTTACAGTACTTGTTGACTGTTGGTTTCATGC 9341
Query 20009 TAATATTTAGCCTTA 20023
| |||||||||||||
Sbjct 9340 TGATATTTAGCCTTA 9326
>seq21029
Length=19983
Score = 82.4 bits (90), Expect = 5e-11
Identities = 82/105 (78%), Gaps = 1/105 (1%)
Strand=Plus/Minus
Query 38105 CAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGACAAAACACGTTCGTC 38164
|||||| | ||| |||||| |||||||||||| ||||| ||||||||| | | | ||
Sbjct 18001 CAACACGAGATGGAGAGTGGGCTCCTTTTGAATGTTGTAGTCAGACAAAGTGCATCCATC 17942
Query 38165 GTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATC-GGAGG 38208
|||| |||||| || ||||| |||| | ||| ||||| |||||
Sbjct 17941 TTCTACTTGTTTGCCAGCAAAGATTAATCTTTGCTGATCAGGAGG 17897
>seq8831
Length=29926
Score = 82.4 bits (90), Expect = 5e-11
Identities = 75/95 (79%), Gaps = 5/95 (5%)
Strand=Plus/Minus
Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956
|||||| |||||||||||||||||| ||| | |||||| ||||| || || ||| |
Sbjct 27261 AAGCCCCTTCCCTTGGCTGTGGTTTAGCTGGGTAGTAGGTAGGGACAGTGGGAAACTCCT 27202
Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991
| || | |||||| || |||||||| |||||| ||
Sbjct 27201 TCATTCATTCATGTGCATCACTAATCAGATGATGA 27167
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 334223019137231
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |