Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pteronotus_20parnellii_20[genbank_20GCA_5F000465405.1_202013-09-13] 177,401 sequences; 1,960,317,893 total letters Query= NC_008168.1 Length=104710 Score E Sequences producing significant alignments: (Bits) Value seq138381 123 2e-23 seq161317 116 2e-21 seq146406 113 3e-20 seq85459 109 4e-19 seq58935 107 1e-18 seq28393 91.5 1e-13 seq79216 89.7 3e-13 seq174782 87.8 1e-12 seq104553 87.8 1e-12 seq39780 82.4 5e-11 seq21029 82.4 5e-11 seq8831 82.4 5e-11 >seq138381 Length=11663 Score = 123 bits (136), Expect = 2e-23 Identities = 79/86 (92%), Gaps = 5/86 (6%) Strand=Plus/Plus Query 25911 CCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGTTAATCCTTT 25965 ||||||||||||||||||||||||||||||||||| || |||||||||||||| || Sbjct 1796 CCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATT 1855 Query 25966 CATGCGCGTCACTAATTAGATGACGA 25991 |||||||||||||||||||||||||| Sbjct 1856 CATGCGCGTCACTAATTAGATGACGA 1881 >seq161317 Length=2104 Score = 116 bits (128), Expect = 2e-21 Identities = 148/204 (73%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 38115 TGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGACAAAACACGTTCGTCGTCTAATTGT 38174 ||||||||| |||||| ||||| ||||||||||| | | || |||| || | || Sbjct 1840 TGAAGAGTGGACTCCTTCTGAATGTTGTAATCAGAGAGAGTGCGGCCGTCCTCAAGCTGC 1899 Query 38175 TTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGGACGCCTTCTTTGTCCATAATTTTT 38234 || ||||| || || | |||||| || |||| ||||| ||| || |||||| ||| || Sbjct 1900 TTGCCGGCGAAAATCAAGCGTTGCTGGTCGGGGGGGATGCCCTCCTTGTCCTGAATCTTG 1959 Query 38235 TGCTTCACATTCTGGACAGTATCTCCACTTTCAACTTCTAATGTAATAGTTTTACCCGTC 38294 ||| ||||| | || ||| || | ||||| || | || || || || || ||| Sbjct 1960 GACTTGACATTGTCGATAGTGTCGGAAGACTCAACCTCGAGGGTGATGGTCTTGCCGGTC 2019 Query 38295 AAGGTTTTCACGAATATCTGCATG 38318 ||||| || ||||| ||||||||| Sbjct 2020 AAGGTCTTGACGAAGATCTGCATG 2043 >seq146406 Length=1016 Score = 113 bits (124), Expect = 3e-20 Identities = 79/90 (88%), Gaps = 5/90 (6%) Strand=Plus/Minus Query 25907 CGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGTTAATC 25961 ||||||||||||||||||||| || || ||||| ||||| || ||||||||||||| Sbjct 95 CGTTCCCTTGGCTGTGGTTTCACTGGAGAGTAGGTAGGGACAGTGGGAATCTCGTTAATC 36 Query 25962 CTTTCATGCGCGTCACTAATTAGATGACGA 25991 | |||||||||||||||||||||||||||| Sbjct 35 CATTCATGCGCGTCACTAATTAGATGACGA 6 >seq85459 Length=12966 Score = 109 bits (120), Expect = 4e-19 Identities = 81/95 (85%), Gaps = 5/95 (5%) Strand=Plus/Minus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 ||||||||||||||||||||||||| ||| || ||||| ||||| || |||||| | Sbjct 12736 AAGCCCGTTCCCTTGGCTGTGGTTTTGCTGGAGAGTAGGTAGGGACAGTGGGAATCTCTT 12677 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 | |||| ||||||||| |||||||||||||||||| Sbjct 12676 TCATCCATTCATGCGCATCACTAATTAGATGACGA 12642 >seq58935 Length=21258 Score = 107 bits (118), Expect = 1e-18 Identities = 70/77 (91%), Gaps = 0/77 (0%) Strand=Plus/Plus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 |||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||| Sbjct 18380 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTTACGGTACTTGTTGGCTATCGGTCTCGT 18439 Query 20007 GGTAATATTTAGCCTTA 20023 | |||||||||||| Sbjct 18440 GCCGGTATTTAGCCTTA 18456 >seq28393 Length=2239 Score = 91.5 bits (100), Expect = 1e-13 Identities = 76/93 (82%), Gaps = 5/93 (5%) Strand=Plus/Minus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 ||||| |||||||||||||||||||| || || ||||| ||||| || |||||| | Sbjct 1989 AAGCCAGTTCCCTTGGCTGTGGTTTCACTGGAGAGTAGGTAGGGACAGTGGGAATCTCAT 1930 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGAC 25989 | |||| ||| || | ||||||||||||||||| Sbjct 1929 TCATCCATTCGTGTGTGTCACTAATTAGATGAC 1897 >seq79216 Length=33065 Score = 89.7 bits (98), Expect = 3e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 38091 CCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGAC 38150 |||||||||| |||| |||| || || ||| ||| || || || ||||| ||||| Sbjct 3407 CCACCTCTCAGGCGCAGGACCAGGTGCAGGGTGGACTCTTTCTGGATGTTGTAGTCAGAA 3466 Query 38151 AAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGG 38210 | | || | || || | || || || ||||| || || | || || |||| |||| Sbjct 3467 AGAGTGCGGCCATCCTCCAGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTCGGGGGGG 3526 Query 38211 ACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAACT 38270 | ||||||||| ||| || || ||||||||||| | || || | || || Sbjct 3527 ATGCCTTCTTTATCCTGGATCTTGGCCTTCACATTCTCAATGGTGTCGCTCGGCTCCACC 3586 Query 38271 TCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317 || | || || || || || |||| ||| |||||||| |||||||| Sbjct 3587 TCCAGGGTGATGGTCTTGCCGGTCAGGGTCTTCACGAAGATCTGCAT 3633 >seq174782 Length=7384 Score = 87.8 bits (96), Expect = 1e-12 Identities = 104/141 (74%), Gaps = 0/141 (0%) Strand=Plus/Plus Query 38105 CAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGACAAAACACGTTCGTC 38164 ||| || | ||||||||| |||||||||||| ||||| ||||||||| |||| | || Sbjct 127 CAATACAAGATGAAGAGTAGACTCCTTTTGAATGTTGTAGTCAGACAAAGTACGTCCATC 186 Query 38165 GTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGGACGCCTTCTTTGTC 38224 || | ||| ||||| ||||| || || | ||| ||||| | || | ||||| || || Sbjct 187 TTCCAGTTGCTTTCCAGCAAAGATCAGTCTTTGCTGATCAGGAGGAATTCCTTCCTTATC 246 Query 38225 CATAATTTTTTGCTTCACATT 38245 | || || ||||||||| Sbjct 247 CTGGATCTTGGCCTTCACATT 267 >seq104553 Length=43841 Score = 87.8 bits (96), Expect = 1e-12 Identities = 147/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 38105 CAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGACAAAACACGTTCGTC 38164 |||||| | ||||||||| |||||||||||| ||||| ||||||||| ||| | || Sbjct 35481 CAACACAAGATGAAGAGTAGACTCCTTTTGAATGTTGTAGTCAGACAAAGTACGCCCATC 35540 Query 38165 GTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGGACGCCTTCTTTGTC 38224 || | ||| || || ||||| || || ||| ||||| | || | ||||| || || Sbjct 35541 TTCCAGTTGCTTGCCAGCAAAGATCAGTTTTTGCTGATCAGGAGGAATTCCTTCCTTATC 35600 Query 38225 CATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAACTTCTAATGTAATAGT 38284 | || | |||||||||| | | ||||| |||| | || | | || || Sbjct 35601 CTGGATCTCGGGCTTCACATTTTCTATTGTATCCGAGGGTTCAGCCTCGAGAGCGATGGT 35660 Query 38285 TTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317 || || | | |||| ||||||| |||||||| Sbjct 35661 CTTCCCTATAAGGGTTGTCACGAAAATCTGCAT 35693 >seq39780 Length=11133 Score = 82.4 bits (90), Expect = 5e-11 Identities = 63/75 (84%), Gaps = 0/75 (0%) Strand=Plus/Minus Query 19949 CTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGCGG 20008 |||||||||||| ||||||||||||||||| || ||||||||| || | ||| || | Sbjct 9400 CTCTCTTCAAAGCTCTTTTCAACTTTCCCTTACAGTACTTGTTGACTGTTGGTTTCATGC 9341 Query 20009 TAATATTTAGCCTTA 20023 | ||||||||||||| Sbjct 9340 TGATATTTAGCCTTA 9326 >seq21029 Length=19983 Score = 82.4 bits (90), Expect = 5e-11 Identities = 82/105 (78%), Gaps = 1/105 (1%) Strand=Plus/Minus Query 38105 CAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGACAAAACACGTTCGTC 38164 |||||| | ||| |||||| |||||||||||| ||||| ||||||||| | | | || Sbjct 18001 CAACACGAGATGGAGAGTGGGCTCCTTTTGAATGTTGTAGTCAGACAAAGTGCATCCATC 17942 Query 38165 GTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATC-GGAGG 38208 |||| |||||| || ||||| |||| | ||| ||||| ||||| Sbjct 17941 TTCTACTTGTTTGCCAGCAAAGATTAATCTTTGCTGATCAGGAGG 17897 >seq8831 Length=29926 Score = 82.4 bits (90), Expect = 5e-11 Identities = 75/95 (79%), Gaps = 5/95 (5%) Strand=Plus/Minus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 |||||| |||||||||||||||||| ||| | |||||| ||||| || || ||| | Sbjct 27261 AAGCCCCTTCCCTTGGCTGTGGTTTAGCTGGGTAGTAGGTAGGGACAGTGGGAAACTCCT 27202 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 | || | |||||| || |||||||| |||||| || Sbjct 27201 TCATTCATTCATGTGCATCACTAATCAGATGATGA 27167 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 334223019137231