Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pteronotus_20parnellii_20[genbank_20GCA_5F000465405.1_202013-09-13]
177,401 sequences; 1,960,317,893 total letters
Query= NC_008603.1
Length=321240
Score E
Sequences producing significant alignments: (Bits) Value
seq174480 140 7e-28
seq172910 109 1e-18
seq159576 107 4e-18
seq19274 95.1 2e-14
seq74728 93.3 9e-14
seq103819 89.7 1e-12
seq59482 89.7 1e-12
>seq174480
Length=6985
Score = 140 bits (154), Expect = 7e-28
Identities = 386/586 (66%), Gaps = 17/586 (3%)
Strand=Plus/Minus
Query 251563 TCGAAGAAATTAGACTTGCCCTCCAGAGAGATTAGCTCCATGAAGTCGAAGGGGTTTGTG 251622
|||||||| || | |||||| | || ||||| ||||||||||||||||||||| |||
Sbjct 1583 TCGAAGAAGTTGGTCTTGCCACCAAGGGAGATGTTCTCCATGAAGTCGAAGGGGTTGGTG 1524
Query 251623 GCATTGTACTGCTTGGGATGGCCAAGTGCTACGAAGATGCGGTCTGCCACAAACTCCAGA 251682
|| ||||| ||| | |||||| || || | || || || || || ||||| |
Sbjct 1523 GCCTTGTAAACCTTCTCGTTGCCAAGCGCGACAAGGAGACGATCAGCGACGAACTCAATG 1464
Query 251683 TACTGTCCCATCAGTTCAGAGTTCATGCCAATCATACGACAAGGAATTGCCTCACAGATG 251742
||||| ||| || |||||||||||||| | | ||| |||| |||||| || |
Sbjct 1463 TACTGCTTCATGAGGTCAGAGTTCATGCCGAGAAGGGCACAGGGAAGAGCCTCAGTGAGG 1404
Query 251743 AATTCCTTTTCGTTGGCAACTGCCTCCTCCACAATTGCCT---TCACCTG--TGCCAG-- 251795
|| |||| || | | || || || | || ||| ||| ||| ||| |
Sbjct 1403 AACTCCTGCTCAATCGTGACGGCATCAGTAATGATATCCTGGATCATCTGCTTGCTGGCA 1344
Query 251796 AGACAGCTTGTTCTCCAGCTTTGAGTACAGGAGCTCGCCAAACTGTTGGTGCAGACCCTC 251855
||| |||| || | |||| ||||| | |||| | ||| ||||||||
Sbjct 1343 CGAC-CCTTG------AGGTGAGAGTGGAGGAGGCAGGCAAAGTCAGTGTGAAGACCCTC 1291
Query 251856 GTCGCGACTGATGAACTCGTTGGACAGACCCAGGCCAGGCATCACCCCACGGTTCCTGAG 251915
|| ||| ||||| ||||||||| | ||| || ||||| | ||||| ||| ||||
Sbjct 1290 ATCACGAGAGATGAGCTCGTTGGAGAAGGTCAGACCGGGCATGAGACCACGCTTCTTGAG 1231
Query 251916 CCAGAAGATTGCGCAAAAGGATCCAGAGAACAGCAGACCCTCGACACACACCCATGCAAC 251975
||||||||| | | |||| ||| ||| | | |||||| ||| | | |||||
Sbjct 1230 CCAGAAGATAGAGGCGAAGGCACCACTGAAGAAGATACCCTCAACAGCAGCGAAAGCAAC 1171
Query 251976 AAGGCGCTCAGCAAACGACTTGTCCTGCGACAAGA-ACTTCTG--TGCCCATGCTGCCTT 252032
|| |||| ||||| || ||||| | || | || | ||||| | |||||
Sbjct 1170 GAGACGCTGGGCAAATGAGGAGTCCTTATCCTGGATCCATCGGATGGCCCAGTCGGCCTT 1111
Query 252033 CTTTCCAACCGCGGGGATTGTTTCGATTGCATCAAAGAGAGAGTTCCGCTCGGCATCGTC 252092
||||| | |||||| || || || || | |||||| || | |||| ||| ||
Sbjct 1110 CTTTCGGATGCAGGGGATGGTCTCAATGGCGTTAAAGAGGTAGGTTCGCTGGGCGGGCTC 1051
Query 252093 CTCGATGAGCGCATCAAGCAGGAGAGAGTACATCTCCGAATGGATG 252138
|| |||| | |||| || || ||||| |||| || ||||||
Sbjct 1050 CTTGATGTAGGTGTCAATGAGCAGGGAGTAGGTCTCGGAGTGGATG 1005
>seq172910
Length=5564
Score = 109 bits (120), Expect = 1e-18
Identities = 448/697 (64%), Gaps = 11/697 (2%)
Strand=Plus/Plus
Query 293115 CTGCGTCTGATCGACAAAGGCACCACGATCAGCAGCGAGGTCAATCACTGTCTTCATAGA 293174
||| | |||||| | |||||||| ||||||||||| | | || ||| | |||
Sbjct 2172 CTGGGACTGATCAATGAAGGCACCTCGATCAGCAGCCATCTGAACGACTTGGCGCTGAGA 2231
Query 293175 GATCTCCCACGATGTCTTGTACACTGCCTTGACATCAGGATGAATGCCAATAACCTTCTG 293234
||||||||| ||||| |||| ||||||||||| | | | ||| || |||||
Sbjct 2232 GATCTCCCAAACGGTCTTATACAGAGCCTTGACATCGGCAGGGATGTTGGGAATGTTCTG 2291
Query 293235 GATAGACCCTCCGTTGGCAATAATCTGGTTCTTCATTGTCTCGGACCA-AGTCCCACGAG 293293
|| || || | ||||| || |||||||||| | |||||||| || |||| |
Sbjct 2292 AATGGAACCATTCTCAGCAATGATGCGGTTCTTCATAGCATCGGACCACAGACCCATG-T 2350
Query 293294 CAATGAGCTCGCGGACAAGGTAAGAGTTGACAACGGGGAACTCACCAGCGAGAGTGCGAC 293353
| | || || || || | | ||||||||| ||||||||||||||||| || |
Sbjct 2351 CGACAAGGTCCTTGAGCAGCCAGGGGTTGACAACCTGGAACTCACCAGCGAGAACACGTC 2410
Query 293354 GGCTGTAAATGTTCGAAGTGATGGGTTCGGCTGCCTCAACAGACCCGCAAATCTGAGCAG 293413
| ||| ||||| || ||| ||| ||| ||| || |||||| | |
Sbjct 2411 GTTGGTAGATGTTGGAGGTGTAGGGCTCGAAGCACTCGTTGTTGCCCAGAATCTGGGAGG 2470
Query 293414 TAGATGCGGTAGGCATAAGAGCAGTCGTCAGAGAGTTCCTCACACCCT---TCTTGACAC 293470
|| || ||||||||| ||||| |||| ||| | | || | |||||||
Sbjct 2471 TACTGGCAGTAGGCATAGGAGCAAGGAGCAGACTGTTACGGATGCCGTGTGTCTTGACTT 2530
Query 293471 GCGATTCGAGACCCGCCCAGT-CCAGAGCAGTCTGA-GGTGTAACACCCCAGAGATGATA 293528
| | ||| | |||||| |||||| ||| || || | || ||| | | |
Sbjct 2531 CCTCTCGAAGAGTCTCCCAGTCCCAGAG--GTCAGAGGGCTTGACGTTCCACATGTCGAA 2588
Query 293529 CTGCATGATACCCTTGCTGGCAGGAGACCCCTCAAAGGTGGGATGGGGGCCATGCTCATC 293588
||| | |||||||| ||| || || || | ||||||| | ||| || | ||| |
Sbjct 2589 CTGGAGGATACCCTCAGAGGCGGGGGAACCTTTGAAGGTGGAGTAGGGACCCTCCTCCTT 2648
Query 293589 AGAGAGCTCGCA-AGATGCCTCAACAGCAGCAAAGTAAATGTGCTCGAAGATCTCACGGT 293647
|| |||| ||| || || | ||||| ||||||| ||||||||||| ||
Sbjct 2649 AGCCAGCT-GCACGGAGGCAGTGAGGGCAGCGTGGTAAATGGTCTCGAAGATCTGCTTGT 2707
Query 293648 TGAGCTTGCGAGCCTGCTCAGAGTCAAACGGCATCTTCAGCTGGAAGAACACATCCTGCA 293707
|||||| ||||||| || || || ||||| ||| | ||| |||| |
Sbjct 2708 TGAGCTCACGAGCCTCGGGTGACTCGAAGGGCATGCGCAGAGCAAGGAAAGCATCGGCAA 2767
Query 293708 GACCCTGTACACCTACACCAACGGGGCGACGACGCTTGTTGCTCGTCTCTGCCTCGGGAA 293767
| ||||| ||||| | ||||| ||| || | ||| |||| || | ||||| | |
Sbjct 2768 GGCCCTGAACACCAAGACCAATGGGTCGGTGGCGCATGTTACTGTTGCGAGCCTCCTGGA 2827
Query 293768 CCGCATATGCCATCACATCAATGCTCCTGTCCAGGTT 293804
| | || ||||||| ||| || ||| ||||||
Sbjct 2828 CAGGGTAGTGGTTCACATCGATGATCTTGTTCAGGTT 2864
>seq159576
Length=1899
Score = 107 bits (118), Expect = 4e-18
Identities = 161/226 (71%), Gaps = 2/226 (1%)
Strand=Plus/Plus
Query 279345 GGTGAGGATCTGTGTGACTGTGATTTCTCGCTCGCATATGGTGGGAAGATTCTGCTAAAC 279404
||||||||||| || ||||| ||||| || || || |||| |||||||| || |||
Sbjct 741 GGTGAGGATCTTTGCAACTGTACCTTCTCTCTTGCCTACGGTGCCAAGATTCTTCTCAAC 800
Query 279405 TCTACCCGCCTCAACATCAAGCGTGGCAACCGGTATGGTCTCATCGGTCCCAATGGAGCG 279464
|| | |||| |||||||||| | || || ||||| ||||||||| || |
Sbjct 801 CAGACTCACCTCCGTCTCAAGCGTGGTCAGCGTTACGGTCTTTGCGGTCCCAACGGTTCC 860
Query 279465 GGTAAGAGCACTCTAATGCGCGCCATTGCAAACGGTCAGCTGGAAGGATTTCCTAACGCA 279524
|| ||| |||||| ||||||||||| |||| ||| | || || || ||||| |||
Sbjct 861 GGAAAGTCCACTCTCATGCGCGCCATCAACAACGAGCAGGTTGAGGGTTTCCCTAA-GCA 919
Query 279525 -TCTGAGGTAAGGACAGTGTATGTAGAGCACGACATCGACTCCTCT 279569
||||| | ||| || | || ||||||||| | |||||| ||
Sbjct 920 GAGCGAGGTCAAGACTGTCTTCGTCGAGCACGACCTTGACTCCGCT 965
Score = 102 bits (112), Expect = 2e-16
Identities = 168/240 (70%), Gaps = 2/240 (1%)
Strand=Plus/Plus
Query 280152 TCTATGAACTCACGGATTGGTGTCATTGGACCCAATGGTGCGGGTAAGTCTACCCTAATC 280211
||| || ||| || |||| ||||| || ||||| ||||| || |||||||| || |||
Sbjct 1548 TCTCTGGGCTCCCGTATTGCCGTCATCGGTCCCAACGGTGCTGGCAAGTCTACTCTGATC 1607
Query 280212 AAAGTCCTGACTGGCGAGACCCAGGCCACTGAGGGGTCCGTTTGGAAGCATCCCAACATG 280271
|| || || ||||| ||| | ||||| |||| | | |||| |||||
Sbjct 1608 AACGTGCTCACTGGTGAGCTCATCCCCACTCAGGGTGAGATCTACCAGCACGAGAACATC 1667
Query 280272 CGGATGGCTTACGTCGCTCAGCACGCTTTCCACCACATCGAGAACCACCTGGACATGACT 280331
|| || || ||| | |||||||||||| |||||||| ||||| || |||| ||||
Sbjct 1668 CGTATCGCCTACATTAAGCAGCACGCTTTCGCTCACATCGATAACCATCTCGACAAGACT 1727
Query 280332 CCTAACCAATACATTCAGTGGCGCTATGCA-AGTGGGCAGGATCTGGAGTCGGTGGATCG 280390
||| | | ||||| |||||||| | | || | ||| |||||| ||| | |||| ||
Sbjct 1728 CCTTCCGAGTACATCCAGTGGCGAT-TCCAGACTGGTGAGGATCGTGAGACCATGGACCG 1786
>seq19274
Length=12311
Score = 95.1 bits (104), Expect = 2e-14
Identities = 65/72 (90%), Gaps = 1/72 (1%)
Strand=Plus/Minus
Query 142053 GTCTCTGTGGCGCAATGGAC-AGCGCGTTGGACTTCTAATCCAAAGGTTGCGGGTTCGAC 142111
|||||||||||||||||||| |||||| ||||||||||||||| ||||| |||||||||
Sbjct 4453 GTCTCTGTGGCGCAATGGACGAGCGCGCTGGACTTCTAATCCAGAGGTTCCGGGTTCGAG 4394
Query 142112 CCCCGCCAGAGA 142123
|||| ||||||
Sbjct 4393 TCCCGGCAGAGA 4382
>seq74728
Length=8140
Score = 93.3 bits (102), Expect = 9e-14
Identities = 68/78 (87%), Gaps = 1/78 (1%)
Strand=Plus/Plus
Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563
|||||| |||||||||||||||||| ||||||||||||| ||||||||||||||||
Sbjct 3025 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 3084
Query 142564 CCCACATCGGGCAGAAGT 142581
||||| | |||| |||||
Sbjct 3085 CCCACGTTGGGC-GAAGT 3101
>seq103819
Length=16670
Score = 89.7 bits (98), Expect = 1e-12
Identities = 63/72 (88%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563
|||||| |||||||||||||||||| ||||||||||||| ||||||||||||||||
Sbjct 15920 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 15979
Query 142564 CCCACATCGGGC 142575
||||| | ||||
Sbjct 15980 CCCACGTTGGGC 15991
>seq59482
Length=6395
Score = 89.7 bits (98), Expect = 1e-12
Identities = 63/72 (88%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563
|||||| |||||||||||||||||| ||||||||||||| ||||||||||||||||
Sbjct 4145 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 4086
Query 142564 CCCACATCGGGC 142575
||||| | ||||
Sbjct 4085 CCCACGTTGGGC 4074
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1025500578024241
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |