Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pteronotus_20parnellii_20[genbank_20GCA_5F000465405.1_202013-09-13] 177,401 sequences; 1,960,317,893 total letters Query= NC_009236.1 Length=36690 Score E Sequences producing significant alignments: (Bits) Value seq174924 93.3 1e-14 >seq174924 Length=7573 Score = 93.3 bits (102), Expect = 1e-14 Identities = 137/190 (72%), Gaps = 3/190 (2%) Strand=Plus/Plus Query 5002 GCACGAGTTCGCGCCCGACAGCGTGTTCCAGCT-CGTGCGGCCGGACATCAATCAGGAGG 5060 ||||||||| || | | | || | |||||| |||| ||||| ||| | ||||||| Sbjct 2766 GCACGAGTTTGCACTTGGCTCGGTATACCAGCTGCGTGAGGCCG-ACACCGATCAGGAAA 2824 Query 5061 TCTATGGCCTGCCCGAGTATCTGAGCTCGCTGCACTCGGCCTGGCTGAACGAATCGTCGA 5120 ||||||| |||| || | || | | |||| ||||| ||| ||||||||| | | Sbjct 2825 TCTATGGGATGCCGGAATGGTTGGCCGTGGTGCAGTCGGCGCTGCTCAACGAATCGGCAA 2884 Query 5121 CGCTGTTCCGGCGCAAGTATTACGAGAACGGCAGCCACGCCGGCTTCATCCTGTACATGA 5180 || ||||||| ||| ||| ||| | |||| || ||||| ||||||| ||||||| Sbjct 2885 CGTTGTTCCGTCGCCGGTACTACTCAAGCGGCTCGCATGCCGGGTTCATCCATTACATGA 2944 Query 5181 CCGACGCCGC 5190 ||||| |||| Sbjct 2945 CCGAC-CCGC 2953 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 117039320144824