Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pteronotus_20parnellii_20[genbank_20GCA_5F000465405.1_202013-09-13] 177,401 sequences; 1,960,317,893 total letters Query= NC_009237.1 Length=37446 Score E Sequences producing significant alignments: (Bits) Value seq176166 84.2 5e-12 >seq176166 Length=10187 Score = 84.2 bits (92), Expect = 5e-12 Identities = 167/243 (69%), Gaps = 6/243 (2%) Strand=Plus/Plus Query 25558 CAGCTCGACGATTACTTCACGGCGTCCTTCAACCCCTTGCCGGCCTTGAACTTCGGCGCT 25617 |||| | || ||| || || || ||||| | ||||||| |||||||| ||| Sbjct 6841 CAGCGAGCCGCTTAGTTTACAGCATCCTTAAGGGCCTTGCCAGCCTTGAAGGACGGATTC 6900 Query 25618 TTCGACGCTGGAATCTTGATTTCTTCGCCGGT-TGCGGGATTGCGTCCGGTGCGGGCGGC 25676 ||||| || | |||||||| |||||||| | |||| ||||| ||||||||||| || Sbjct 6901 TTCGAAGCAGCGATCTTGATGGTGTCGCCGGTCTTCGGG-TTGCGGCCGGTGCGGGCTGC 6959 Query 25677 CCGCGCGCCCACGCTGAATACGCCGAATCCCGTCAGCGTCACCGTGTCGCCCTTGCGCAG 25736 || ||| || ||| ||||| || ||| || |||| ||||| | ||| Sbjct 6960 ACGGTCGCGGACCTGGAAGGTACCGAAGCCAACCAGGGTGACCGCATCGCCGTCCTTCAG 7019 Query 25737 CGACTTCGTGATGCCTTCGAGAACGGCTTC--CAGCGCAAAGCCGGAGTCGGCTTTCGTC 25794 || ||| |||||| | | | ||||| || |||||| || ||| ||||| || ||| Sbjct 7020 CGCCTTGGTGATGGCAGCAACGACGGCATCGACAGCGC--GGCTGGACTCGGCCTTGGTC 7077 Query 25795 AGG 25797 ||| Sbjct 7078 AGG 7080 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 119453423768896