Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pteronotus_20parnellii_20[genbank_20GCA_5F000465405.1_202013-09-13] 177,401 sequences; 1,960,317,893 total letters Query= NC_009333.1 Length=137969 Score E Sequences producing significant alignments: (Bits) Value seq18562 167 2e-36 seq114922 100 3e-16 >seq18562 Length=18598 Score = 167 bits (184), Expect = 2e-36 Identities = 439/670 (66%), Gaps = 9/670 (1%) Strand=Plus/Minus Query 20159 AGCTGCAGCCGTAGTGGCTCTATATGCGTTTTGTAGATGTGGGCATCTCCCAACGTGTGA 20218 |||||||| || ||||| |||| | ||| | ||| ||||||||||| ||||| Sbjct 12854 AGCTGCAGTTTCAGCGGCTCAGTATGATTCAGGTAAACGTGTGCATCTCCCAAAGTGTGT 12795 Query 20219 ATAAACTCCCCGGGTCTAAGACCAGTAACATGAGCAAGCATATAAGTTAAGAGGGAATAG 20278 | ||| || || || | || || | | || || | ||| | || | ||||| ||| Sbjct 12794 ACAAAGTCACCTGGCTTTAGGCCCATGATGTGTGCGATCATGTGGGTGAGCAGGGAGTAG 12735 Query 20279 CTGGCAATGTTAAAAGGAACTCCCAAACCCATGTCTCCCGACCTCTGATACAGCTGACAG 20338 |||| ||||| || || | |||| ||||||||| | |||||||| || ||||| ||| Sbjct 12734 CTGGAGATGTTGAAGGGTGCGCCCAGGCCCATGTCTGCTGACCTCTGGTATAGCTGGCAG 12675 Query 20339 GAAAGCTCACCGTC--------AGCTACATAAAATTGACATAACAAGTGACAGGGCGGAA 20390 || ||||| || | || || || || || || | || || || || | Sbjct 12674 GACAGCTCCCCATTCATCACGTAGACACGTAGAACTGGCAAAGGGCATGGCATGGAGGTA 12615 Query 20391 GCGCCATCAACGACAAGTCCGCCGGGTTCCACGCACACATAATGATTCTTCTATCGTGCG 20450 | ||||| || | | || || ||||| ||||||| |||||||||||| || | Sbjct 12614 GGGCCATGAAAGGAAGATCTTTTGGATTCCAAGCACACAGAATGATTCTTCTGTCAGTAG 12555 Query 20451 GATTATTTTTTATTAAATCCACAATGTACGACAATTGGTCAAACCCCTGGCCTGTATAGT 20510 | || |||| || | || | | | || |||| | | || || |||| ||| | Sbjct 12554 GTTTGGTTTTGATCATGTCAATCACCTTTTGCAGTTGGCCCACTCCTTGACCTGAATAAT 12495 Query 20511 CAGCATCCGCGTCCACGTACGCCGCCCCAAAGTGCCTCCACTGGAAACCGTAAACAGGTC 20570 | | |||| | ||| | |||||||| |||||||||| |||| | ||||| || | Sbjct 12494 CTGAATCCATATTTTTGTATTCTGCCCCAAAATGCCTCCACT-GAAAGCCTAAACTGGGC 12436 Query 20571 CCAAATCCCCCTCCCTTCTGTGCGCCAGGCCGCGCCCGGCCAGGAACTCCCTGGAGCCAT 20630 | ||||||||||| ||||| | | || | || ||||||| || | || |||| Sbjct 12435 CTAAATCCCCCTCTTTTCTGCTAGAGAATCCAAGGCCATCCAGGAAGTCACGAGACCCAT 12376 Query 20631 TTTTGTCCCATATCTTGACTCCTGTTCTTGAAAGCTCCCTGGAGTCAGTACTCCCCTTCA 20690 | ||||| || || ||||| | |||| || || | | | || || || | Sbjct 12375 TGGCATCCCAGATTTTCACTCCCCTGGTTGACAGTTCTTTAGCATTTGTGGATCCGTTGA 12316 Query 20691 GAAACCAAAGCAGCTCTTGCACTACGCCTCGCCAAAACACCCGCTTTGTGGTTAGTAAGG 20750 |||||| |||||||| | || | || ||| ||||| | || || || || | | Sbjct 12315 TAAACCACAGCAGCTCCTCCAAAATCCCCTTCCAGAACACACATTTGGTTGTCAGCAGAG 12256 Query 20751 GAAAGTGGTCCCGCAGACTATACCTGGCCTGCATGCCAAATAGAGAGAGGGTGCCTATGC 20810 |||| | || | ||| || || || ||| ||| || || | || |||||||| ||| Sbjct 12255 GAAATTCATCTCTCAGGCTGTAGCTCGCCCGCACGCTGAACACCGACAGGGTGCCGGTGC 12196 Query 20811 CGGTGCGGTC 20820 | |||||||| Sbjct 12195 CTGTGCGGTC 12186 >seq114922 Length=10415 Score = 100 bits (110), Expect = 3e-16 Identities = 78/93 (84%), Gaps = 0/93 (0%) Strand=Plus/Plus Query 20245 AACATGAGCAAGCATATAAGTTAAGAGGGAATAGCTGGCAATGTTAAAAGGAACTCCCAA 20304 |||||| |||||||| | |||||| || | |||||||||||||| || ||||||||||| Sbjct 858 AACATGGGCAAGCATGTGAGTTAACAGCGCGTAGCTGGCAATGTTGAAGGGAACTCCCAA 917 Query 20305 ACCCATGTCTCCCGACCTCTGATACAGCTGACA 20337 |||||| || | ||||| ||||| |||||||| Sbjct 918 ACCCATATCGCAAGACCTTTGATATAGCTGACA 950 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 440394050298840