Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pteronotus_20parnellii_20[genbank_20GCA_5F000465405.1_202013-09-13] 177,401 sequences; 1,960,317,893 total letters Query= NC_009382.1 Length=38760 Score E Sequences producing significant alignments: (Bits) Value seq174924 194 4e-45 >seq174924 Length=7573 Score = 194 bits (214), Expect = 4e-45 Identities = 301/426 (71%), Gaps = 3/426 (1%) Strand=Plus/Minus Query 3074 CCGAATCCGCCGGTGTTGTTCGGAATGATGCCCATGAGCTGCGGCGGTACGCGGTGCGCG 3133 |||||||| || | || | || | ||| || | |||||||| | | ||| |||| Sbjct 3205 CCGAATCCACCAGCATTCTGAGGGACGATACCGAGCAGCTGCGGGTG-ATGCGCAGCGCC 3147 Query 3134 GCGAGCTGGTCGTCGCGCGTGACGTTCTTGATGTTCCAGAACTCGTCCTTCGCGGCCACC 3193 || || ||| || || || ||| |||||| |||||| ||||| ||||| || Sbjct 3146 GCCAGTATGTCATCACGGGTCACGCGCTTGATCCCGGTGAACTCATCCTTTGCGGCAACT 3087 Query 3194 TCGGACACCGGTAGCAACTGGATCCCATCCTTCTTGCCATTGGGCGCGTACATGAACAGG 3253 ||| | || | || ||| | ||| ||||| ||||||||||||| || || || |||| Sbjct 3086 TCGCTGATAGGAATCAGCTGCAACCCGTCCTTGTTGCCATTGGGCGAGTGCACGAGCAGG 3027 Query 3254 TTGCGGAAATTGCCCGGCCCCTTGGCACTCTT-CATCGCCTCGCGCAGCGTGTCGACGTC 3312 |||||||||||||| ||||| | | ||| || |||||| |||| | ||| ||||| Sbjct 3026 TTGCGGAAATTGCCTGGCCCACGCG-AGTCTCGCAGCGCCTCACGCAAGGCGTCCACGTC 2968 Query 3313 CTCCTGCTTCTGCGCCGCATCGGTCATGTACAGGATGAAGCCGGCGTGCGAGCCGTTCTT 3372 | || | || || ||||||||||| ||||||| ||||| ||||||||| | Sbjct 2967 CATGCCCTCCGGCTGCGGGTCGGTCATGTAATGGATGAACCCGGCATGCGAGCCGCTTGA 2908 Query 3373 GTAGTACCGGCGCCGGAACAGCGTGGCCGATTCGTTCAACCACGTGGCGTTCAGCGCGGA 3432 |||||||||||| ||||||| ||| ||||||||||| | | || | | || | ||| Sbjct 2907 GTAGTACCGGCGACGGAACAACGTTGCCGATTCGTTGAGCAGCGCCGACTGCACCACGGC 2848 Query 3433 CAGGTATTCCGGCAGGCCGTACACCTCCTGATTGATGTCCGGTTCCTGGAGGTGGAACAC 3492 || ||||||||| || || | ||||||| | |||| | || | || ||| | || Sbjct 2847 CAACCATTCCGGCATCCCATAGATTTCCTGATCGGTGTCGGCCTCACGCAGCTGGTATAC 2788 Query 3493 CGAGCC 3498 |||||| Sbjct 2787 CGAGCC 2782 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 123649365782164