Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pteronotus_20parnellii_20[genbank_20GCA_5F000465405.1_202013-09-13] 177,401 sequences; 1,960,317,893 total letters Query= NC_009811.2 Length=137619 Score E Sequences producing significant alignments: (Bits) Value seq101107 244 9e-60 >seq101107 Length=18006 Score = 244 bits (270), Expect = 9e-60 Identities = 630/952 (66%), Gaps = 6/952 (1%) Strand=Plus/Minus Query 90122 AACTGGAACGATATTCGGTATCCATCTTTCTATCGAGCTTACAAAGAGTTAACTACAAAT 90181 ||||||||||| |||| ||| || || |||||||| || ||||| || | | || || Sbjct 3839 AACTGGAACGACATTCCGTACCCCTCGTTCTATCGGGCGTACAAGGAACTGTCGACCAAC 3780 Query 90182 TACTGGTTGCCTGATGAGGTAGATATGAAGAGCGATGCCAAACAGTACAACCACTTATCC 90241 | |||| | || || || || || |||||| || || |||||| | | ||| Sbjct 3779 TTCTGGATCCCCGACGAAGTGGACATGAAGCTGGACGCACGCCAGTACGGTGAACTGTCC 3720 Query 90242 GAAGAAGAGAAATATGCGTTTGACTCCATTATCGGACTTTTAGCTACACTTGACTCACCC 90301 | | ||||| | || | ||||| || ||||| || | || || || || || || Sbjct 3719 GGACGCGAGAAGAACGCCTACGACTCGATCATCGGCCTGCTGGCCACGCTCGATTCGCCG 3660 Query 90302 CAAACACGTTTTATTTATAATATCGCAGAGTATGTCAGTGATGCCTCTGTTCATGCTATT 90361 || || || || || || || |||| ||||| ||| ||| | | | ||||| | | Sbjct 3659 CAGACCCGGTTCATCTACAACGTCGCCGAGTACATCACCGATCCGGCCGCGCATGCCAAT 3600 Query 90362 ACAGCTATTATTGCACAACAAGAAGCTATTCATAATGAGAGTTATTCTTATGTACTTGCT 90421 | || || || | || || |||| || ||||| || || || ||||| || || Sbjct 3599 GCGGCGATCATCGGCCAGCAGGAAGTGATACATAACGAAAGCTACAGCTATGTGCTGGCG 3540 Query 90422 TCTATTACTAACTTACAAGAGCAGAATCGAGTATTTGAGGAAGCTAGAACACACCCTACG 90481 || || || | | | | ||||| || || || || || | || || || || Sbjct 3539 TCGATCACCGATCTGCCCAACCAGAACCGGGTGTTCGAACTGGCCCGCACGCATCCGACC 3480 Query 90482 ATTATTAAACGTAATGCACCTATTATGAAGTCTTATGACGATTTCATGAATAACAAAACA 90541 || || | || || || || || ||| || | || ||||| |||||| |||| || Sbjct 3479 ATCATCAGCCGCAACGCGCCGATCATGCAGGCGTACGACGACTTCATGCGCGACAAGACC 3420 Query 90542 CCTGAGAATATGGTAAAAGCTTTAGTACAATCATCTATCTTAGAGGGTATTAATTTCTAC 90601 | |||| || | || | | | || || || ||| | ||||| || || ||||| Sbjct 3419 GCGGAGACGCTGCTGAAGTCGCTGATCCAGTCGTCGATCCTGGAGGGCATCAACTTCTAT 3360 Query 90602 AGCGGTTTTGCTTACTTCTATAACCTTGTTCGTCAAAACAAGATGACGGGAACAGGTAAA 90661 ||| || || || ||||| ||||| || || || ||| ||||| || || || || Sbjct 3359 TCCGGCTTCGCCTATTTCTACAACCTGGTGCGGCAGAACCGCATGACCGGCACCGGCAAG 3300 Query 90662 ATCATTAGCTTCATTAATCGTGATGAGTTAGCCCATTCGAAGTTTATTTCTGAGCTAATT 90721 ||||| |||||||| || || || ||| | |||||| | ||||| || ||| | || Sbjct 3299 ATCATCAGCTTCATCAACCGCGACGAGCTGGCCCATACCAAGTTCATCAGCGAGGTGATC 3240 Query 90722 AGAGCTATTGTAGGGGAAAACCCTGAACTACAAACAGATGAACTAAATGACTACGTGTAT 90781 | || || || || || || || ||||| || || | || || | | ||||| | Sbjct 3239 CGCGCCATCGTCGGCGAGAATCCGGAACTGCAGACCAACGAGCTGACGGCTTACGTACAC 3180 Query 90782 -GCTTCTTTTAGACATGCCGTAGAGCTAGAACAAGCG-TGGTCTAGTGAGGTACTACAGG 90839 || ||| || |||||| | ||| || | || ||||| || || || | | Sbjct 3179 AGCGCCTTCGAG-CATGCCATCACGCTGGAG-ACGCAATGGTCGTCGGAAGTGCTGGATG 3122 Query 90840 GCATTGAAGGAATTGATGTGGAAGAGATGTTAGACTATGTAAAATATCGTGCTAATAAAA 90899 |||| || || || |||||||| |||||| | ||| || || || || || || || | Sbjct 3121 GCATCGACGGCATCGATGTGGACGAGATGGTGCGCTACGTGAAGTACCGCGCCAACAAGA 3062 Query 90900 TGTTAGGGATGCTAGGTCTTCAACCAATGTATCAAGGTCAC-ACAGAAAATTCTATGACA 90958 || || ||||| ||| | | | |||| || | || || || ||| ||| | Sbjct 3061 TGGCCGGCATGCTGGGTATCGAGCGGCTGTA-CAGCGATACGACCGACAATGTGATGCCG 3003 Query 90959 TGGATTAAAGCTTACGCCGATAACTTTACAGAAACAAAAACCGACTTTTTCGAAATGCGT 91018 ||||| || || |||||||| ||||| || ||||| || |||||||| ||||| ||||| Sbjct 3002 TGGATCAAGGCCTACGCCGACAACTTCACCGAAACCAAGACCGACTTCTTCGAGATGCGC 2943 Query 91019 AACTCTAGTTACAAGAAAACAAACTTAGACAATGGGTTCGATGACTTATGAG 91070 || | ||||||||||| || ||| | ||||| || ||||| || | |||| Sbjct 2942 AATGCAAGTTACAAGAAGACCAACGTCGACAACGGCTTCGACGATCTCTGAG 2891 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 439276533912840