Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pteronotus_20parnellii_20[genbank_20GCA_5F000465405.1_202013-09-13] 177,401 sequences; 1,960,317,893 total letters Query= NC_009898.1 Length=368683 Score E Sequences producing significant alignments: (Bits) Value seq161317 134 3e-26 seq79216 129 1e-24 seq94837 111 4e-19 seq174782 98.7 2e-15 seq104553 98.7 2e-15 seq174480 96.9 8e-15 seq110331 91.5 3e-13 seq118497 87.8 4e-12 >seq161317 Length=2104 Score = 134 bits (148), Expect = 3e-26 Identities = 170/231 (74%), Gaps = 2/231 (1%) Strand=Plus/Plus Query 288244 TGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCG 288303 || |||||||| |||| || ||||| |||| || || || || || || |||||| Sbjct 1075 TGGCCACCGCGAAGTCGGAGAACGAGGTGAAGAGTTGACTCCTTCTGAATGTTGTAGTCG 1134 Query 288304 GCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCT 288363 | ||||| || ||||| || || || || |||||||| |||||||||||| | Sbjct 1135 CTTAAGGTGCGACCATCTTCCAACTGCTTACCAGCGAAGATAAGACGCTGTTGATCAGGG 1194 Query 288364 GGGATTCCTTCTTTATCCTGGATTTTCGCT-TTCACGTTTTCTATAGAATCGCTCGATTC 288422 || || || || || ||||| || || ||| |||||||| || |||| || || || || Sbjct 1195 GGAATACCCTCCTTGTCCTGAATCTT-GCTCTTCACGTTGTCGATAGTGTCACTGGACTC 1253 Query 288423 TACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || || ||||| ||||| ||||| |||||||| || || |||||||| Sbjct 1254 GACCTCAAGGGTGATGGTCTTTCCGGTGAGAGTCTTCACAAAAATCTGCAT 1304 Score = 107 bits (118), Expect = 5e-18 Identities = 141/193 (73%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341 ||| || || || || ||||||| || || || || ||||| | ||| || || ||||| Sbjct 1341 TTCCTTCTGAATGTTGTAGTCGGAAAGAGTTCGGCCATCTTCAAGTTGCTTGCCAGCGAA 1400 Query 288342 GATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCT-TTCACGT 288400 ||| || ||||||||| || || || || || |||||||| || ||| ||||| | Sbjct 1401 GATGAGTCGCTGTTGATCGGGAGGAATACCCTCCTTGTCCTGGATCTT-GCTCTTCACAT 1459 Query 288401 TTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGA 288460 | || || | |||| || || ||||| || || || ||||| || || || ||||||| Sbjct 1460 TATCAATGGTATCGGATGACTCGACTTCCAGAGTAATGGTCTTTCCAGTGAGGGTCTTGA 1519 Query 288461 CGAATATCTGCAT 288473 |||| || ||||| Sbjct 1520 CGAAGATTTGCAT 1532 Score = 105 bits (116), Expect = 2e-17 Identities = 162/231 (70%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| ||||| | || || || |||| ||| || || || || || || || | | Sbjct 1816 CCACCACGGAGGCGGAGAACAAGGTGAAGAGTGGACTCCTTCTGAATGTTGTAATCAGAG 1875 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || ||||| ||||| || | || || || ||||| |||| || || || ||| Sbjct 1876 AGAGTGCGGCCGTCCTCAAGCTGCTTGCCGGCGAAAATCAAGCGTTGCTGGTCGGGGGGG 1935 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 || || || || ||||| || || | || || || || |||| ||| || || || Sbjct 1936 ATGCCCTCCTTGTCCTGAATCTTGGACTTGACATTGTCGATAGTGTCGGAAGACTCAACC 1995 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATTATG 288477 ||||| ||||| ||||| ||||||| ||||||||||| |||||||| ||| Sbjct 1996 TCGAGGGTGATGGTCTTGCCGGTCAAGGTCTTGACGAAGATCTGCATGATG 2046 >seq79216 Length=33065 Score = 129 bits (142), Expect = 1e-24 Identities = 143/191 (75%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 ||||| ||||| || ||||| | || ||||| || || || | || || ||||| ||| Sbjct 3443 TCTTTCTGGATGTTGTAGTCAGAAAGAGTGCGGCCATCCTCCAGCTGCTTGCCTGCAAAG 3502 Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402 || || | ||| || ||||| ||||||||||||||||| || || ||||| || Sbjct 3503 ATGAGCCTCTGCTGGTCGGGGGGGATGCCTTCTTTATCCTGGATCTTGGCCTTCACATTC 3562 Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462 || || | ||||||| || || || || ||||| ||||| |||||||| ||||| ||| Sbjct 3563 TCAATGGTGTCGCTCGGCTCCACCTCCAGGGTGATGGTCTTGCCGGTCAGGGTCTTCACG 3622 Query 288463 AATATCTGCAT 288473 || |||||||| Sbjct 3623 AAGATCTGCAT 3633 >seq94837 Length=4094 Score = 111 bits (122), Expect = 4e-19 Identities = 139/191 (73%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || || ||||| || |||||| || |||||||| || || | || || || || ||| Sbjct 4094 TCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGTCCATCCTCGAGCTGCTTGCCAGCAAAG 4035 Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402 || || ||||| || | ||||| || || || |||||||| || | || ||||| Sbjct 4034 ATGAGTCGCTGCTGGTCAGGGGGGATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTTG 3975 Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462 || || | ||| || || || || || |||||||||||||| || || ||||||||| Sbjct 3974 TCGATGGTGTCGGAAGACTCCACCTCAAGGGTGATCGTCTTCCCCGTGAGGGTCTTGACG 3915 Query 288463 AATATCTGCAT 288473 || |||||||| Sbjct 3914 AAAATCTGCAT 3904 >seq174782 Length=7384 Score = 98.7 bits (108), Expect = 2e-15 Identities = 122/167 (73%), Gaps = 0/167 (0%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| | ||||| | ||| ||||||| || || ||||| || || ||||| | Sbjct 113 CCACCACAAAGTCTCAATACAAGATGAAGAGTAGACTCCTTTTGAATGTTGTAGTCAGAC 172 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 | || ||||| ||||| | ||| ||||| || |||||||| | || ||| | || Sbjct 173 AAAGTACGTCCATCTTCCAGTTGCTTTCCAGCAAAGATCAGTCTTTGCTGATCAGGAGGA 232 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC 288413 |||||||| ||||||||||| || || ||||| |||||||| | ||| Sbjct 233 ATTCCTTCCTTATCCTGGATCTTGGCCTTCACATTTTCTATTGTATC 279 >seq104553 Length=43841 Score = 98.7 bits (108), Expect = 2e-15 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| || ||||| | || ||||||| || || ||||| || || ||||| | Sbjct 35467 CCACCACGAAGTCTCAACACAAGATGAAGAGTAGACTCCTTTTGAATGTTGTAGTCAGAC 35526 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 | || || || ||||| | ||| || || || |||||||| || ||| | || Sbjct 35527 AAAGTACGCCCATCTTCCAGTTGCTTGCCAGCAAAGATCAGTTTTTGCTGATCAGGAGGA 35586 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 |||||||| ||||||||||| | | ||||| |||||||| | ||| | ||| | Sbjct 35587 ATTCCTTCCTTATCCTGGATCTCGGGCTTCACATTTTCTATTGTATCCGAGGGTTCAGCC 35646 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 ||||| | ||| |||||||| | || || | ||||| |||||||| Sbjct 35647 TCGAGAGCGATGGTCTTCCCTATAAGGGTTGTCACGAAAATCTGCAT 35693 >seq174480 Length=6985 Score = 96.9 bits (106), Expect = 8e-15 Identities = 145/206 (70%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 269119 GAGTTCATTTGTGACGCTATCCCATGTTCTATGATCGGTATGAATGCCGATCTCATGAAT 269178 |||||| | ||| ||| | || ||| | | |||| ||||| | || |||||||| Sbjct 1399 GAGTTCCTCACTGAGGCTCTTCCCTGTGCCCTTCTCGGCATGAACTCTGACCTCATGAAG 1458 Query 269179 CAATATATCGAATTCGTGGCTGATCGTATCTTCACGGCACTCGGTTATGAGAAAGTGTAC 269238 || || || || ||||| ||||||||| || | || || || | ||||| || ||| Sbjct 1459 CAGTACATTGAGTTCGTCGCTGATCGTCTCCTTGTCGCGCTTGGCAACGAGAAGGTTTAC 1518 Query 269239 AATTCGAAGAATCCCTTCGCCTTTATGGAACTAATTTCGCTCGAAGGAAAGACGAACTTC 269298 || | | || ||||||| ||| ||||| || || || | || ||||| |||||| Sbjct 1519 AAGGCCACCAACCCCTTCGACTTCATGGAGAACATCTCCCTTGGTGGCAAGACCAACTTC 1578 Query 269299 TTCGAAAAGCGTGTCAGCGACTATCA 269324 ||||| |||||||| |||||| || Sbjct 1579 TTCGAGAAGCGTGTTGCCGACTACCA 1604 >seq110331 Length=4397 Score = 91.5 bits (100), Expect = 3e-13 Identities = 130/182 (71%), Gaps = 6/182 (3%) Strand=Plus/Plus Query 288286 TTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATC 288345 || ||||| || ||||||| ||| || || || || || | || || || ||||||||| Sbjct 1808 TTCTGGATGTTGTAGTCGGAGAGAGTTCGGCCATCCTCGAGCTGCTTACCAGCGAAGATC 1867 Query 288346 AGACGCTGTTGAGAATCTGGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402 || |||||||| || ||| || || || || |||||||| || | || || || Sbjct 1868 AGTCGCTGTTG---GTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTG 1924 Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462 || || | || || || || ||||| ||||| ||||| || ||||| ||||| ||| Sbjct 1925 TCGATGGTGTCCGAGGACTCGACCTCGAGGGTGATGGTCTTGCCCGTCAGGGTCTTCACG 1984 Query 288463 AA 288464 || Sbjct 1985 AA 1986 >seq118497 Length=6476 Score = 87.8 bits (96), Expect = 4e-12 Identities = 146/210 (70%), Gaps = 7/210 (3%) Strand=Plus/Minus Query 288268 AGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAAT 288327 ||||||| || ||| ||||| || || |||| | || ||||| ||||| | | Sbjct 3402 AGATGAAGAATGGATTCCTTTTGAATGTTGTAGTTAGACTAAGTACGTCCATCTTCCAGT 3343 Query 288328 TGTTTTCCTGCGAAGATCAGACGCTG----TTGAGAATCTGGGATTCCTTCTTTATCCTG 288383 ||||| || || ||||||| | || || ||| || |||||||| |||||||| Sbjct 3342 TGTTTGCCAGCAAAGATCAATCTTTGCCAATTAGGAA---GGAATTCCTTCCTTATCCTG 3286 Query 288384 GATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTT 288443 ||| || || || || |||||||| ||| | | ||| | | ||| ||||| |||| Sbjct 3285 GATCTTGGCCTTTACATTTTCTATTATATCCATGGGTTCAGCCTTGAGAGTGATGATCTT 3226 Query 288444 CCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 ||| || || || || || || |||||||| Sbjct 3225 CCCTGTAAGGGTTTTCACAAAAATCTGCAT 3196 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1176973104162878