Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pteronotus_20parnellii_20[genbank_20GCA_5F000465405.1_202013-09-13] 177,401 sequences; 1,960,317,893 total letters Query= NC_009899.1 Length=344691 Score E Sequences producing significant alignments: (Bits) Value seq174480 116 8e-21 seq159576 98.7 2e-15 seq138381 84.2 5e-11 >seq174480 Length=6985 Score = 116 bits (128), Expect = 8e-21 Identities = 135/182 (74%), Gaps = 0/182 (0%) Strand=Plus/Plus Query 243544 GACGCTATTCCATGCCGGCTTATTGGCATGAACTCTGAACTCATGGGACAGTACATCGAA 243603 || ||| |||| || ||| | |||||||||||||| |||||| |||||||| || Sbjct 1411 GAGGCTCTTCCCTGTGCCCTTCTCGGCATGAACTCTGACCTCATGAAGCAGTACATTGAG 1470 Query 243604 TTCGTAGCCGACCGCATTTTCATCGCGCTTGGTTATGAGAAAGTGTACAACTCCAAGAAC 243663 ||||| || || || | | |||||||||| | ||||| || ||||| ||| ||| Sbjct 1471 TTCGTCGCTGATCGTCTCCTTGTCGCGCTTGGCAACGAGAAGGTTTACAAGGCCACCAAC 1530 Query 243664 CCCTTTGCCTTTATGGAGCTCATTTCGCTTCAAGGGAAAACTAACTTCTTCGAAAAGCGT 243723 ||||| | ||| |||||| ||| || ||| || || || ||||||||||| |||||| Sbjct 1531 CCCTTCGACTTCATGGAGAACATCTCCCTTGGTGGCAAGACCAACTTCTTCGAGAAGCGT 1590 Query 243724 GT 243725 || Sbjct 1591 GT 1592 >seq159576 Length=1899 Score = 98.7 bits (108), Expect = 2e-15 Identities = 174/251 (69%), Gaps = 2/251 (1%) Strand=Plus/Minus Query 334105 AGTCAATGATAGCCATGTTAGAATCGGACCCGTCGAGATCGTGTTCCACGTAAGCAGTTT 334164 |||||||| | | ||| | || ||| | ||| || ||||| || ||| | |||| | Sbjct 990 AGTCAATGGTGGTCATCTCAGTATCAGCGGAGTCAAGGTCGTGCTCGACGAAGACAGTCT 931 Query 334165 TCAAAACA-TCCGCAGAGGGGAACCCTTCAAGCTGACCGTTCACAATAGCGCGCATCAGA 334223 | | | || || |||| |||||| ||| ||| |||| || |||||||| ||| Sbjct 930 TGACCTCGCTCTGCTTAGGGAAACCCT-CAACCTGCTCGTTGTTGATGGCGCGCATGAGA 872 Query 334224 GTTGATTTACCCGCCCCGTTTGGCCCACACAGACCGTAGCGGTTTCCACGCTTCAGATTG 334283 || || || || | ||||| || || || |||||||| || | |||||||| ||| | Sbjct 871 GTGGACTTTCCGGAACCGTTGGGACCGCAAAGACCGTAACGCTGACCACGCTTGAGACGG 812 Query 334284 AACCGCGTATTGTTCAGAAGAATTTTTCCACCATATGCCAGAGAAAATTCACAATCACAC 334343 | | || | ||| |||||||| || |||| || || ||||| || ||| | || Sbjct 811 AGGTGAGTCTGGTTGAGAAGAATCTTGGCACCGTAGGCAAGAGAGAAGGTACAGTTGCAA 752 Query 334344 AGATCCTCACC 334354 ||||||||||| Sbjct 751 AGATCCTCACC 741 >seq138381 Length=11663 Score = 84.2 bits (92), Expect = 5e-11 Identities = 190/283 (67%), Gaps = 2/283 (1%) Strand=Plus/Plus Query 306442 TCCTTGCGAGTCTCATTTGATTCTACAATTGCTCCGATGATATCTTGAGGCACCCCCTCG 306501 |||||||| || ||||||||| ||||| || ||| | | || ||||| | Sbjct 7651 TCCTTGCGCGTGCGATTTGATTCCACAATAGCGTGGATCAAGTTCTGCGGCACGTCGCTA 7710 Query 306502 AAATTAGCCAGCAATTGCTTCGTATCCTTTGGAAAGCAATAAGCTCCGTAACCGAACGAT 306561 | || |||||||| ||||| |||||||| || | ||| || | ||||||||||| || Sbjct 7711 TAGTTGGCCAGCAACTGCTTGGTATCCTTGGGCAGGCAGTAGCCCCCGTAACCGAAGGAA 7770 Query 306562 GGATTCGAATATCCCTGGCCAATTCGAGGTTCTAGAGTAACACCATCGATGATTTCTTTC 306621 || || || ||| || || || || || | || || |||||||| | | Sbjct 7771 GGGTTGTTGTAGTGTGAGCCGATGCGCGGATCCAGGCTCACGCCGTCGATGATCTGGCGC 7830 Query 306622 GCATTCATATCATGAG-ACATTGCGAATGTATCTAGTTCGTTGAAGTATGCAACTCGCAT 306680 | || || | | || | ||| || | || || | || |||||||| || || ||||| Sbjct 7831 GTATCCAGACCGTGGGTACA-GGCATAGGTGTCCAACTCATTGAAGTAGGCCACACGCAT 7889 Query 306681 TGCAAGATACGTGTTAGAGAATAGTTTGACGGCCTCGGCTTCG 306723 || | || ||||| | ||| ||||| | ||| || |||||| Sbjct 7890 CGCCAAGTAGGTGTTGGCGAAGAGTTTTATGGCTTCAGCTTCG 7932 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1100373208559350