Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pteronotus_20parnellii_20[genbank_20GCA_5F000465405.1_202013-09-13]
177,401 sequences; 1,960,317,893 total letters
Query= NC_009899.1
Length=344691
Score E
Sequences producing significant alignments: (Bits) Value
seq174480 116 8e-21
seq159576 98.7 2e-15
seq138381 84.2 5e-11
>seq174480
Length=6985
Score = 116 bits (128), Expect = 8e-21
Identities = 135/182 (74%), Gaps = 0/182 (0%)
Strand=Plus/Plus
Query 243544 GACGCTATTCCATGCCGGCTTATTGGCATGAACTCTGAACTCATGGGACAGTACATCGAA 243603
|| ||| |||| || ||| | |||||||||||||| |||||| |||||||| ||
Sbjct 1411 GAGGCTCTTCCCTGTGCCCTTCTCGGCATGAACTCTGACCTCATGAAGCAGTACATTGAG 1470
Query 243604 TTCGTAGCCGACCGCATTTTCATCGCGCTTGGTTATGAGAAAGTGTACAACTCCAAGAAC 243663
||||| || || || | | |||||||||| | ||||| || ||||| ||| |||
Sbjct 1471 TTCGTCGCTGATCGTCTCCTTGTCGCGCTTGGCAACGAGAAGGTTTACAAGGCCACCAAC 1530
Query 243664 CCCTTTGCCTTTATGGAGCTCATTTCGCTTCAAGGGAAAACTAACTTCTTCGAAAAGCGT 243723
||||| | ||| |||||| ||| || ||| || || || ||||||||||| ||||||
Sbjct 1531 CCCTTCGACTTCATGGAGAACATCTCCCTTGGTGGCAAGACCAACTTCTTCGAGAAGCGT 1590
Query 243724 GT 243725
||
Sbjct 1591 GT 1592
>seq159576
Length=1899
Score = 98.7 bits (108), Expect = 2e-15
Identities = 174/251 (69%), Gaps = 2/251 (1%)
Strand=Plus/Minus
Query 334105 AGTCAATGATAGCCATGTTAGAATCGGACCCGTCGAGATCGTGTTCCACGTAAGCAGTTT 334164
|||||||| | | ||| | || ||| | ||| || ||||| || ||| | |||| |
Sbjct 990 AGTCAATGGTGGTCATCTCAGTATCAGCGGAGTCAAGGTCGTGCTCGACGAAGACAGTCT 931
Query 334165 TCAAAACA-TCCGCAGAGGGGAACCCTTCAAGCTGACCGTTCACAATAGCGCGCATCAGA 334223
| | | || || |||| |||||| ||| ||| |||| || |||||||| |||
Sbjct 930 TGACCTCGCTCTGCTTAGGGAAACCCT-CAACCTGCTCGTTGTTGATGGCGCGCATGAGA 872
Query 334224 GTTGATTTACCCGCCCCGTTTGGCCCACACAGACCGTAGCGGTTTCCACGCTTCAGATTG 334283
|| || || || | ||||| || || || |||||||| || | |||||||| ||| |
Sbjct 871 GTGGACTTTCCGGAACCGTTGGGACCGCAAAGACCGTAACGCTGACCACGCTTGAGACGG 812
Query 334284 AACCGCGTATTGTTCAGAAGAATTTTTCCACCATATGCCAGAGAAAATTCACAATCACAC 334343
| | || | ||| |||||||| || |||| || || ||||| || ||| | ||
Sbjct 811 AGGTGAGTCTGGTTGAGAAGAATCTTGGCACCGTAGGCAAGAGAGAAGGTACAGTTGCAA 752
Query 334344 AGATCCTCACC 334354
|||||||||||
Sbjct 751 AGATCCTCACC 741
>seq138381
Length=11663
Score = 84.2 bits (92), Expect = 5e-11
Identities = 190/283 (67%), Gaps = 2/283 (1%)
Strand=Plus/Plus
Query 306442 TCCTTGCGAGTCTCATTTGATTCTACAATTGCTCCGATGATATCTTGAGGCACCCCCTCG 306501
|||||||| || ||||||||| ||||| || ||| | | || ||||| |
Sbjct 7651 TCCTTGCGCGTGCGATTTGATTCCACAATAGCGTGGATCAAGTTCTGCGGCACGTCGCTA 7710
Query 306502 AAATTAGCCAGCAATTGCTTCGTATCCTTTGGAAAGCAATAAGCTCCGTAACCGAACGAT 306561
| || |||||||| ||||| |||||||| || | ||| || | ||||||||||| ||
Sbjct 7711 TAGTTGGCCAGCAACTGCTTGGTATCCTTGGGCAGGCAGTAGCCCCCGTAACCGAAGGAA 7770
Query 306562 GGATTCGAATATCCCTGGCCAATTCGAGGTTCTAGAGTAACACCATCGATGATTTCTTTC 306621
|| || || ||| || || || || || | || || |||||||| | |
Sbjct 7771 GGGTTGTTGTAGTGTGAGCCGATGCGCGGATCCAGGCTCACGCCGTCGATGATCTGGCGC 7830
Query 306622 GCATTCATATCATGAG-ACATTGCGAATGTATCTAGTTCGTTGAAGTATGCAACTCGCAT 306680
| || || | | || | ||| || | || || | || |||||||| || || |||||
Sbjct 7831 GTATCCAGACCGTGGGTACA-GGCATAGGTGTCCAACTCATTGAAGTAGGCCACACGCAT 7889
Query 306681 TGCAAGATACGTGTTAGAGAATAGTTTGACGGCCTCGGCTTCG 306723
|| | || ||||| | ||| ||||| | ||| || ||||||
Sbjct 7890 CGCCAAGTAGGTGTTGGCGAAGAGTTTTATGGCTTCAGCTTCG 7932
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1100373208559350
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |