Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pteronotus_20parnellii_20[genbank_20GCA_5F000465405.1_202013-09-13] 177,401 sequences; 1,960,317,893 total letters Query= NC_010116.1 Length=58663 Score E Sequences producing significant alignments: (Bits) Value seq174594 86.0 2e-12 >seq174594 Length=7134 Score = 86.0 bits (94), Expect = 2e-12 Identities = 166/242 (69%), Gaps = 5/242 (2%) Strand=Plus/Minus Query 21534 GCACCTGGTGGGCTCCTTCAACGCCCACCTCCGCGATACCGTCCTGCTGTTCGGTGATGA 21593 ||| || ||||| |||||| ||||||||| | | |||||||||||| || || Sbjct 5872 GCAGCTCGTGGGGAGGTTCAACTCCCACCTCCAGAACTGCATCCTGCTGTTCGCGGACGA 5813 Query 21594 GGCTTTCTTCGCCGGGGACAAGAAGCACGAAAGCGTGCTCAAGACCCTCGTGACCGAAGA 21653 ||| |||| ||||| |||||| | ||| ||||| ||| | ||||||| || || Sbjct 5812 GGCGTTCTGGGCCGGCGACAAGGCGGGCGAGTCGGTGCTGAAGGCGCTCGTGA-CGGAGC 5754 Query 21654 ACAC-CTGGTGATCGAGGGCAAGGGCGTGGACGCGGAAGCGGCCCCAAACTATGTCCACC 21712 || ||| | ||||||||||||| ||||| | || | ||| | || ||| Sbjct 5753 CGACGCTGATCTACGAGGGCAAGGGCCGCGACGCCGTGATGGGCAGGAACCACGTGCACA 5694 Query 21713 TGGTCCTCGCCTCGAACGAAGATTGGGTGGTGCCCGCGGGTCTGGA---TGAACGCCGGT 21769 | ||| | || || ||| | || ||||| ||||| || || |||| || ||||||| Sbjct 5693 TCGTCATGGCATCCAACAACGACTGGGTCGTGCCGGCCGGCATGGACGGCGAGCGCCGGT 5634 Query 21770 TC 21771 || Sbjct 5633 TC 5632 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 187204794922250