Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pteronotus_20parnellii_20[genbank_20GCA_5F000465405.1_202013-09-13] 177,401 sequences; 1,960,317,893 total letters Query= NC_010811.2 Length=231255 Score E Sequences producing significant alignments: (Bits) Value seq161357 118 2e-21 seq166368 114 2e-20 >seq161357 Length=2110 Score = 118 bits (130), Expect = 2e-21 Identities = 143/192 (74%), Gaps = 2/192 (1%) Strand=Plus/Plus Query 40998 TGATGCCGGACGCGCACGCAGGCATCGGCAGCACGGTAGGATCGGTGATCGCTACGCAAG 41057 |||||||||||| |||| || | ||| || || || ||||||||| | || | | Sbjct 1457 TGATGCCGGACGTGCACCTGGGAAAGGGCGCGACCGTCGGCTCGGTGATCCCGACCCGCG 1516 Query 41058 GTGCCATCATTCCGGCGGCGGTGGGCGTGGACATCGGCTGCGGCATGGTGGCGGTTCGTA 41117 | || ||||||||||||||||||||||||||||||||||||||||||| ||||| || | Sbjct 1517 GAGCGATCATTCCGGCGGCGGTGGGCGTGGACATCGGCTGCGGCATGGCCGCGGTGCGCA 1576 Query 41118 CCAGTCTCAAGGCCAGTCAGTTGCCGGACAACCTGCGCGATGTTCGCTTGCAG-ATCGAA 41176 | | || |||||| | |||| || ||||||| | | ||| ||| ||||| Sbjct 1577 CGACGCTGCAGGCCAACGACCTGCCCGATGACCTGCGGCAGCTGCGC-AACAGCATCGAG 1635 Query 41177 CGCGACATCCCG 41188 ||| ||||||| Sbjct 1636 CGCAGCATCCCG 1647 Score = 104 bits (114), Expect = 3e-17 Identities = 198/287 (69%), Gaps = 10/287 (3%) Strand=Plus/Plus Query 41381 CAGCTTGGCACGCTGGGTTCCGGCAACCACTTCATTGAACTGTGCGTGGACCAGTCGCAA 41440 ||||| ||||||||||| |||||||||||||| || |||||| |||| | || | Sbjct 1786 CAGCTGGGCACGCTGGGAGGTGGCAACCACTTCATCGAGCTGTGCCTGGATGAAACGGAT 1845 Query 41441 GACGTGTGGATCATGCTGCATAGCGGTTCGCGCGGTGTGGGCAACATCATCGGC-CGTCA 41499 | ||||||| | |||||||| ||||| ||||| || || ||| | |||||| ||| | Sbjct 1846 GCCGTGTGGGTAATGCTGCACAGCGGCTCGCGTGGCACCGGGAACCTGATCGGCACGT-A 1904 Query 41500 CTACATCGAGCGTGCGC------AGAAGGAGTGCGGCATG-TGGCACAGCAGCCTGCCGC 41552 || |||||||| |||| || |||| || || || | | || ||||| Sbjct 1905 CTTCATCGAGCAGGCGCGTCGCGAGCTGGAGCGCCGCGTGCTCGGTTTCCA-TCTGCCTG 1963 Query 41553 ACAACGATCTCGCGTTCTTCCCTGAGGACACTCCGGGCTTCAATCACTACGTCCTGTCCA 41612 |||| || || || |||||| || | | ||| ||| | ||||||| | Sbjct 1964 ACAAGGACCTGGCCTTCTTCATGGAAGGCGAGCCGCTGTTCGACGACTACGTGGAAGCGG 2023 Query 41613 TGCTGTGGGCGCAGGACTTCGCTCGGCAGAATCGTGCGGTGATGTTG 41659 || ||||||||||||| ||| ||||| ||||| | || |||| || Sbjct 2024 TGTCCTGGGCGCAGGACTACGCGCGGCACAATCGCGAGGCGATGATG 2070 >seq166368 Length=2936 Score = 114 bits (126), Expect = 2e-20 Identities = 275/408 (67%), Gaps = 16/408 (4%) Strand=Plus/Plus Query 41692 GCCGGCCTTCGAGCTGACGGAAGAGGCGGTGAACTGCCACCACAACTATTGTG-AGCAGG 41750 |||| | ||| |||| ||| ||| || ||||||||||||||||| ||| || ||| Sbjct 258 GCCGCCGTTCCGGCTGGCGGCGATGGCCGTCAACTGCCACCACAACTA-CGTGCAGAAGG 316 Query 41751 AGAACCACTTCGGGC-GCAACGTGTGGGTCACGCGCAAGGGTGCGGTTCGTGCACGTGAA 41809 | | ||| ||||| | ||| || |||||| |||||||||||||| ||||||| | Sbjct 317 AAACGCACGCCGGGCAGGAAC-TGCTGGTCACCCGCAAGGGTGCGGTCAGTGCACGCCAG 375 Query 41810 GACGATCTGGGGATCATTCCGGGATCCATGGGTACGAAGTCGTACATCGTCAAGGGCAAG 41869 | ||| ||||| ||||| || || |||||| ||| |||||||| |||||| Sbjct 376 GGCGAGCTGGGCATCATCCCCGGCAGCATGGGCACGCGCAGCTACATCGTGCGTGGCAAG 435 Query 41870 GGCAATCCGCA---TTCGTACTGCTCGTGCAGTCACGGGGCAGGACGCCGTATGTCGCGC 41926 |||||| | | || || || ||||| ||||| ||||| || ||| ||| Sbjct 436 GGCAATGCAGACAGTTTCCACAGC---TGCAGCCACGGCGCAGGCCGGGTGATGAGCCGC 492 Query 41927 ACCGAGGCCGTCAAGCGATTCACC---GTCGAAGACCTCGTGCAGCAGACGCAGGGTGTT 41983 | ||| | |||| ||||| | | | ||| || || ||| | ||| Sbjct 493 GGCACGGCACGCGAGCGGATCACCCTGGCCCAGCACCGCG---AGGCGACCGCGCATGTG 549 Query 41984 GAATGCCCGAAGACCAAGGAAGTGCTGGATGAAATCCCGGCCGCGTACAAGGACATCGAT 42043 ||||||| ||| || | |||||||||||| ||||| ||||||||| ||||| Sbjct 550 GAATGCCGCAAGGACAGCGGCGTGCTGGATGAATCGCCGGCGGCGTACAAGTCGATCGAC 609 Query 42044 CAGGTGATGCTTGACCAAAGCGATCTGGTGGAAGTCGTTCATACGCTG 42091 | |||||| | ||| ||| |||||||| || || || || ||| Sbjct 610 GATGTGATGGCCGCCCAGCTCGACCTGGTGGACGTGGTCCACACACTG 657 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 738247289111400