Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pteronotus_20parnellii_20[genbank_20GCA_5F000465405.1_202013-09-13]
177,401 sequences; 1,960,317,893 total letters
Query= NC_010811.2
Length=231255
Score E
Sequences producing significant alignments: (Bits) Value
seq161357 118 2e-21
seq166368 114 2e-20
>seq161357
Length=2110
Score = 118 bits (130), Expect = 2e-21
Identities = 143/192 (74%), Gaps = 2/192 (1%)
Strand=Plus/Plus
Query 40998 TGATGCCGGACGCGCACGCAGGCATCGGCAGCACGGTAGGATCGGTGATCGCTACGCAAG 41057
|||||||||||| |||| || | ||| || || || ||||||||| | || | |
Sbjct 1457 TGATGCCGGACGTGCACCTGGGAAAGGGCGCGACCGTCGGCTCGGTGATCCCGACCCGCG 1516
Query 41058 GTGCCATCATTCCGGCGGCGGTGGGCGTGGACATCGGCTGCGGCATGGTGGCGGTTCGTA 41117
| || ||||||||||||||||||||||||||||||||||||||||||| ||||| || |
Sbjct 1517 GAGCGATCATTCCGGCGGCGGTGGGCGTGGACATCGGCTGCGGCATGGCCGCGGTGCGCA 1576
Query 41118 CCAGTCTCAAGGCCAGTCAGTTGCCGGACAACCTGCGCGATGTTCGCTTGCAG-ATCGAA 41176
| | || |||||| | |||| || ||||||| | | ||| ||| |||||
Sbjct 1577 CGACGCTGCAGGCCAACGACCTGCCCGATGACCTGCGGCAGCTGCGC-AACAGCATCGAG 1635
Query 41177 CGCGACATCCCG 41188
||| |||||||
Sbjct 1636 CGCAGCATCCCG 1647
Score = 104 bits (114), Expect = 3e-17
Identities = 198/287 (69%), Gaps = 10/287 (3%)
Strand=Plus/Plus
Query 41381 CAGCTTGGCACGCTGGGTTCCGGCAACCACTTCATTGAACTGTGCGTGGACCAGTCGCAA 41440
||||| ||||||||||| |||||||||||||| || |||||| |||| | || |
Sbjct 1786 CAGCTGGGCACGCTGGGAGGTGGCAACCACTTCATCGAGCTGTGCCTGGATGAAACGGAT 1845
Query 41441 GACGTGTGGATCATGCTGCATAGCGGTTCGCGCGGTGTGGGCAACATCATCGGC-CGTCA 41499
| ||||||| | |||||||| ||||| ||||| || || ||| | |||||| ||| |
Sbjct 1846 GCCGTGTGGGTAATGCTGCACAGCGGCTCGCGTGGCACCGGGAACCTGATCGGCACGT-A 1904
Query 41500 CTACATCGAGCGTGCGC------AGAAGGAGTGCGGCATG-TGGCACAGCAGCCTGCCGC 41552
|| |||||||| |||| || |||| || || || | | || |||||
Sbjct 1905 CTTCATCGAGCAGGCGCGTCGCGAGCTGGAGCGCCGCGTGCTCGGTTTCCA-TCTGCCTG 1963
Query 41553 ACAACGATCTCGCGTTCTTCCCTGAGGACACTCCGGGCTTCAATCACTACGTCCTGTCCA 41612
|||| || || || |||||| || | | ||| ||| | ||||||| |
Sbjct 1964 ACAAGGACCTGGCCTTCTTCATGGAAGGCGAGCCGCTGTTCGACGACTACGTGGAAGCGG 2023
Query 41613 TGCTGTGGGCGCAGGACTTCGCTCGGCAGAATCGTGCGGTGATGTTG 41659
|| ||||||||||||| ||| ||||| ||||| | || |||| ||
Sbjct 2024 TGTCCTGGGCGCAGGACTACGCGCGGCACAATCGCGAGGCGATGATG 2070
>seq166368
Length=2936
Score = 114 bits (126), Expect = 2e-20
Identities = 275/408 (67%), Gaps = 16/408 (4%)
Strand=Plus/Plus
Query 41692 GCCGGCCTTCGAGCTGACGGAAGAGGCGGTGAACTGCCACCACAACTATTGTG-AGCAGG 41750
|||| | ||| |||| ||| ||| || ||||||||||||||||| ||| || |||
Sbjct 258 GCCGCCGTTCCGGCTGGCGGCGATGGCCGTCAACTGCCACCACAACTA-CGTGCAGAAGG 316
Query 41751 AGAACCACTTCGGGC-GCAACGTGTGGGTCACGCGCAAGGGTGCGGTTCGTGCACGTGAA 41809
| | ||| ||||| | ||| || |||||| |||||||||||||| ||||||| |
Sbjct 317 AAACGCACGCCGGGCAGGAAC-TGCTGGTCACCCGCAAGGGTGCGGTCAGTGCACGCCAG 375
Query 41810 GACGATCTGGGGATCATTCCGGGATCCATGGGTACGAAGTCGTACATCGTCAAGGGCAAG 41869
| ||| ||||| ||||| || || |||||| ||| |||||||| ||||||
Sbjct 376 GGCGAGCTGGGCATCATCCCCGGCAGCATGGGCACGCGCAGCTACATCGTGCGTGGCAAG 435
Query 41870 GGCAATCCGCA---TTCGTACTGCTCGTGCAGTCACGGGGCAGGACGCCGTATGTCGCGC 41926
|||||| | | || || || ||||| ||||| ||||| || ||| |||
Sbjct 436 GGCAATGCAGACAGTTTCCACAGC---TGCAGCCACGGCGCAGGCCGGGTGATGAGCCGC 492
Query 41927 ACCGAGGCCGTCAAGCGATTCACC---GTCGAAGACCTCGTGCAGCAGACGCAGGGTGTT 41983
| ||| | |||| ||||| | | | ||| || || ||| | |||
Sbjct 493 GGCACGGCACGCGAGCGGATCACCCTGGCCCAGCACCGCG---AGGCGACCGCGCATGTG 549
Query 41984 GAATGCCCGAAGACCAAGGAAGTGCTGGATGAAATCCCGGCCGCGTACAAGGACATCGAT 42043
||||||| ||| || | |||||||||||| ||||| ||||||||| |||||
Sbjct 550 GAATGCCGCAAGGACAGCGGCGTGCTGGATGAATCGCCGGCGGCGTACAAGTCGATCGAC 609
Query 42044 CAGGTGATGCTTGACCAAAGCGATCTGGTGGAAGTCGTTCATACGCTG 42091
| |||||| | ||| ||| |||||||| || || || || |||
Sbjct 610 GATGTGATGGCCGCCCAGCTCGACCTGGTGGACGTGGTCCACACACTG 657
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 738247289111400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |