Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pteronotus_20parnellii_20[genbank_20GCA_5F000465405.1_202013-09-13]
177,401 sequences; 1,960,317,893 total letters
Query= NC_011345.1
Length=155122
Score E
Sequences producing significant alignments: (Bits) Value
seq94837 102 8e-17
seq161317 100 3e-16
seq79216 86.0 6e-12
seq110331 84.2 2e-11
seq97981 82.4 8e-11
>seq94837
Length=4094
Score = 102 bits (112), Expect = 8e-17
Identities = 137/191 (72%), Gaps = 0/191 (0%)
Strand=Plus/Minus
Query 138424 TCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAG 138483
||||| || |||||||||||||||| || || |||||||| || || || | | ||
Sbjct 4094 TCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGTCCATCCTCGAGCTGCTTGCCAGCAAAG 4035
Query 138484 ATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGT 138543
|| || ||||| ||||| || || || || || ||||| ||| || || | |
Sbjct 4034 ATGAGTCGCTGCTGGTCAGGGGGGATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTTG 3975
Query 138544 TCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACA 138603
|| | |||||||| ||||||||||| | || | ||| || || || || || || ||
Sbjct 3974 TCGATGGTGTCGGAAGACTCCACCTCAAGGGTGATCGTCTTCCCCGTGAGGGTCTTGACG 3915
Query 138604 AAAATCTGCAT 138614
|||||||||||
Sbjct 3914 AAAATCTGCAT 3904
>seq161317
Length=2104
Score = 100 bits (110), Expect = 3e-16
Identities = 143/198 (72%), Gaps = 4/198 (2%)
Strand=Plus/Plus
Query 138419 TTGACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGG 138478
|||||||||| ||||||||||||||||| | || || || || | || ||||| |
Sbjct 1109 TTGACTCCTTCTGAATGTTGTAGTCGCTTAAGGTGCGACCATCTTCCAACTGCTTACCAG 1168
Query 138479 AATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTA 138538
|||| ||||||||||| || || || ||||| || ||||| ||| | || | ||
Sbjct 1169 CGAAGATAAGACGCTGTTGATCAGGGGGAATACCCTCCTTGTC-CTGAATCTTGCTCTTC 1227
Query 138539 A--TTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGT 138596
| ||| || | ||||| | ||||| ||||| | || | || || || || |||||
Sbjct 1228 ACGTTG-TCGATAGTGTCACTGGACTCGACCTCAAGGGTGATGGTCTTTCCGGTGAGAGT 1286
Query 138597 TTTTACAAAAATCTGCAT 138614
|| ||||||||||||||
Sbjct 1287 CTTCACAAAAATCTGCAT 1304
Score = 87.8 bits (96), Expect = 2e-12
Identities = 132/184 (72%), Gaps = 4/184 (2%)
Strand=Plus/Plus
Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480
|| ||||| ||||||||||||||| | || || || |||||||| || || | |
Sbjct 1567 GATTCCTTCTGAATGTTGTAGTCGGCAAGGGTTCGGCCATCTTCGAGTTGCTTTCCAGCA 1626
Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTA-- 138538
|||| || ||||| ||||| ||||| || || || ||||| ||| | |||| |||
Sbjct 1627 AAGATCAGGCGCTGCTGGTCAGGAGGGATGCCCTCCTTGTC-CTGAATCTTTGACTTAAC 1685
Query 138539 ATTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTT 138598
|||| || | ||| |||| |||||| ||||| | || | || || ||||| || || |
Sbjct 1686 ATTG-TCGATGGTATCGGACGACTCGACCTCAAGAGTGATGGTCTTGCCAGTGAGGGTCT 1744
Query 138599 TTAC 138602
| ||
Sbjct 1745 TGAC 1748
>seq79216
Length=33065
Score = 86.0 bits (94), Expect = 6e-12
Identities = 157/230 (68%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 138385 CAGCCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCG 138444
||||| |||| || |||| || | || | | | ||||| || || |||||||||||
Sbjct 3404 CAGCCACCTCTCAGGCGCAGGACCAGGTGCAGGGTGGACTCTTTCTGGATGTTGTAGTCA 3463
Query 138445 CTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGA 138504
| ||| || ||||| || || || || | | |||| || | ||| ||||| ||
Sbjct 3464 GAAAGAGTGCGGCCATCCTCCAGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTCGGGG 3523
Query 138505 GGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCC 138564
|| || |||||||| || ||| || || | | || | ||||||| ||| ||||
Sbjct 3524 GGGATGCCTTCTTTATCCTGGATCTTGGCCTTCACATTCTCAATGGTGTCGCTCGGCTCC 3583
Query 138565 ACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614
||||| | || | || || || ||||| || || || || ||||||||
Sbjct 3584 ACCTCCAGGGTGATGGTCTTGCCGGTCAGGGTCTTCACGAAGATCTGCAT 3633
>seq110331
Length=4397
Score = 84.2 bits (92), Expect = 2e-11
Identities = 130/183 (71%), Gaps = 2/183 (1%)
Strand=Plus/Plus
Query 138425 CCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGA 138484
|||| || |||||||||||| | ||| || |||||||| || ||||| | |||
Sbjct 1806 CCTTCTGGATGTTGTAGTCGGAGAGAGTTCGGCCATCCTCGAGCTGCTTACCAGCGAAGA 1865
Query 138485 TTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTA-ATTGT 138543
| || |||||||||||||| || || || || ||||| ||| || || | ||||
Sbjct 1866 TCAGTCGCTGTTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTG- 1924
Query 138544 TCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACA 138603
|| | |||||| | ||||| ||||||| || | || || || ||||| || || ||
Sbjct 1925 TCGATGGTGTCCGAGGACTCGACCTCGAGGGTGATGGTCTTGCCCGTCAGGGTCTTCACG 1984
Query 138604 AAA 138606
|||
Sbjct 1985 AAA 1987
>seq97981
Length=9611
Score = 82.4 bits (90), Expect = 8e-11
Identities = 155/228 (68%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 138387 GCCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCT 138446
||| || | || ||| | || || || | | | ||||| || ||||||||||||||
Sbjct 2468 GCCACCCCACAGACGAAGCACCAACTGCAGGGTGGACTCTTTCTGAATGTTGTAGTCTGA 2527
Query 138447 CATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGG 138506
| |||| || || || ||||| || | | | | |||||||| ||||| | |||
Sbjct 2528 AAGAGTATAATCATCTTCCAGCTGTTTGCCTGCAAAAACCAGACGCTGCTGGTCAGAAGG 2587
Query 138507 TATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCAC 138566
|| || || ||||| |||||| ||| | || | |||||| | | ||| ||
Sbjct 2588 GATGCCCTCCTTGTCTTGGATTTTAGCTTTGACAATCTCAATGGTGTCACTGGGCTCAAC 2647
Query 138567 CTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614
||||| || | || || |||||||| || ||| |||| ||||||||
Sbjct 2648 CTCGAGGGTGATGGTCTTGCCAGTCAGGGTCTTTGCAAAGATCTGCAT 2695
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 495161931924720
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |