Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pteronotus_20parnellii_20[genbank_20GCA_5F000465405.1_202013-09-13] 177,401 sequences; 1,960,317,893 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq94837 102 8e-17 seq161317 100 3e-16 seq79216 86.0 6e-12 seq110331 84.2 2e-11 seq97981 82.4 8e-11 >seq94837 Length=4094 Score = 102 bits (112), Expect = 8e-17 Identities = 137/191 (72%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 138424 TCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAG 138483 ||||| || |||||||||||||||| || || |||||||| || || || | | || Sbjct 4094 TCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGTCCATCCTCGAGCTGCTTGCCAGCAAAG 4035 Query 138484 ATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGT 138543 || || ||||| ||||| || || || || || ||||| ||| || || | | Sbjct 4034 ATGAGTCGCTGCTGGTCAGGGGGGATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTTG 3975 Query 138544 TCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACA 138603 || | |||||||| ||||||||||| | || | ||| || || || || || || || Sbjct 3974 TCGATGGTGTCGGAAGACTCCACCTCAAGGGTGATCGTCTTCCCCGTGAGGGTCTTGACG 3915 Query 138604 AAAATCTGCAT 138614 ||||||||||| Sbjct 3914 AAAATCTGCAT 3904 >seq161317 Length=2104 Score = 100 bits (110), Expect = 3e-16 Identities = 143/198 (72%), Gaps = 4/198 (2%) Strand=Plus/Plus Query 138419 TTGACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGG 138478 |||||||||| ||||||||||||||||| | || || || || | || ||||| | Sbjct 1109 TTGACTCCTTCTGAATGTTGTAGTCGCTTAAGGTGCGACCATCTTCCAACTGCTTACCAG 1168 Query 138479 AATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTA 138538 |||| ||||||||||| || || || ||||| || ||||| ||| | || | || Sbjct 1169 CGAAGATAAGACGCTGTTGATCAGGGGGAATACCCTCCTTGTC-CTGAATCTTGCTCTTC 1227 Query 138539 A--TTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGT 138596 | ||| || | ||||| | ||||| ||||| | || | || || || || ||||| Sbjct 1228 ACGTTG-TCGATAGTGTCACTGGACTCGACCTCAAGGGTGATGGTCTTTCCGGTGAGAGT 1286 Query 138597 TTTTACAAAAATCTGCAT 138614 || |||||||||||||| Sbjct 1287 CTTCACAAAAATCTGCAT 1304 Score = 87.8 bits (96), Expect = 2e-12 Identities = 132/184 (72%), Gaps = 4/184 (2%) Strand=Plus/Plus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 || ||||| ||||||||||||||| | || || || |||||||| || || | | Sbjct 1567 GATTCCTTCTGAATGTTGTAGTCGGCAAGGGTTCGGCCATCTTCGAGTTGCTTTCCAGCA 1626 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTA-- 138538 |||| || ||||| ||||| ||||| || || || ||||| ||| | |||| ||| Sbjct 1627 AAGATCAGGCGCTGCTGGTCAGGAGGGATGCCCTCCTTGTC-CTGAATCTTTGACTTAAC 1685 Query 138539 ATTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTT 138598 |||| || | ||| |||| |||||| ||||| | || | || || ||||| || || | Sbjct 1686 ATTG-TCGATGGTATCGGACGACTCGACCTCAAGAGTGATGGTCTTGCCAGTGAGGGTCT 1744 Query 138599 TTAC 138602 | || Sbjct 1745 TGAC 1748 >seq79216 Length=33065 Score = 86.0 bits (94), Expect = 6e-12 Identities = 157/230 (68%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 138385 CAGCCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCG 138444 ||||| |||| || |||| || | || | | | ||||| || || ||||||||||| Sbjct 3404 CAGCCACCTCTCAGGCGCAGGACCAGGTGCAGGGTGGACTCTTTCTGGATGTTGTAGTCA 3463 Query 138445 CTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGA 138504 | ||| || ||||| || || || || | | |||| || | ||| ||||| || Sbjct 3464 GAAAGAGTGCGGCCATCCTCCAGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTCGGGG 3523 Query 138505 GGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCC 138564 || || |||||||| || ||| || || | | || | ||||||| ||| |||| Sbjct 3524 GGGATGCCTTCTTTATCCTGGATCTTGGCCTTCACATTCTCAATGGTGTCGCTCGGCTCC 3583 Query 138565 ACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 ||||| | || | || || || ||||| || || || || |||||||| Sbjct 3584 ACCTCCAGGGTGATGGTCTTGCCGGTCAGGGTCTTCACGAAGATCTGCAT 3633 >seq110331 Length=4397 Score = 84.2 bits (92), Expect = 2e-11 Identities = 130/183 (71%), Gaps = 2/183 (1%) Strand=Plus/Plus Query 138425 CCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGA 138484 |||| || |||||||||||| | ||| || |||||||| || ||||| | ||| Sbjct 1806 CCTTCTGGATGTTGTAGTCGGAGAGAGTTCGGCCATCCTCGAGCTGCTTACCAGCGAAGA 1865 Query 138485 TTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTA-ATTGT 138543 | || |||||||||||||| || || || || ||||| ||| || || | |||| Sbjct 1866 TCAGTCGCTGTTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTG- 1924 Query 138544 TCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACA 138603 || | |||||| | ||||| ||||||| || | || || || ||||| || || || Sbjct 1925 TCGATGGTGTCCGAGGACTCGACCTCGAGGGTGATGGTCTTGCCCGTCAGGGTCTTCACG 1984 Query 138604 AAA 138606 ||| Sbjct 1985 AAA 1987 >seq97981 Length=9611 Score = 82.4 bits (90), Expect = 8e-11 Identities = 155/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 138387 GCCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCT 138446 ||| || | || ||| | || || || | | | ||||| || |||||||||||||| Sbjct 2468 GCCACCCCACAGACGAAGCACCAACTGCAGGGTGGACTCTTTCTGAATGTTGTAGTCTGA 2527 Query 138447 CATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGG 138506 | |||| || || || ||||| || | | | | |||||||| ||||| | ||| Sbjct 2528 AAGAGTATAATCATCTTCCAGCTGTTTGCCTGCAAAAACCAGACGCTGCTGGTCAGAAGG 2587 Query 138507 TATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCAC 138566 || || || ||||| |||||| ||| | || | |||||| | | ||| || Sbjct 2588 GATGCCCTCCTTGTCTTGGATTTTAGCTTTGACAATCTCAATGGTGTCACTGGGCTCAAC 2647 Query 138567 CTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 ||||| || | || || |||||||| || ||| |||| |||||||| Sbjct 2648 CTCGAGGGTGATGGTCTTGCCAGTCAGGGTCTTTGCAAAGATCTGCAT 2695 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 495161931924720