Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pteronotus_20parnellii_20[genbank_20GCA_5F000465405.1_202013-09-13]
177,401 sequences; 1,960,317,893 total letters
Query= NC_011589.1
Length=40287
Score E
Sequences producing significant alignments: (Bits) Value
seq132890 446 4e-121
seq176772 208 2e-49
>seq132890
Length=11277
Score = 446 bits (494), Expect = 4e-121
Identities = 385/479 (80%), Gaps = 3/479 (1%)
Strand=Plus/Minus
Query 28050 GCCCCGATCCCCTCTGGCTGGGTCCAGACCGGCGAGCGCTGGGCGCTTTGGTACAACGGC 28109
|||||||| ||||||||||||||||||||||| ||| |||||||||| ||||| ||||||
Sbjct 7861 GCCCCGATGCCCTCTGGCTGGGTCCAGACCGGTGAGTGCTGGGCGCTCTGGTAAAACGGC 7802
Query 28110 CGCGAGACGGCCAGCGTTACACCCGACGGCGGTCCTGGGGTCCGGCTATGGATGGAAGGC 28169
|| ||||| ||||||| | | |||| || ||| | || || || || ||||||||||||
Sbjct 7801 CGAGAGACAGCCAGCGCTGCTTCCGATGGTGGTGCCGGCGTGCGCCTGTGGATGGAAGGC 7742
Query 28170 CAGAAGATGTGGCAGGTGAAGGAAGTGCGCGCGGCCAACGTCCGGCAGGCGAAGCGGTAC 28229
|||||||||||||| |||||| ||||||||||||| | ||||||||||||||| |||||
Sbjct 7741 CAGAAGATGTGGCAAGTGAAGAAAGTGCGCGCGGCGAGCGTCCGGCAGGCGAAACGGTAT 7682
Query 28230 GCCGAGCGCTGGTGTGCGGCCAGGCTCTATCCCGATCTGCCACTGCGCCAGGCAGTCGCC 28289
||||||||||||| ||||||||||| ||||||| || || |||||| |||| ||||||
Sbjct 7681 TCCGAGCGCTGGTGCGCGGCCAGGCTACATCCCGACCTTCCCCTGCGCGAGGCCGTCGCC 7622
Query 28290 CGGCTGACCGACAGCACCCCGATCCAGCCCGAGCCGCCGCTGNNNNNNNNNNNNNCGACC 28349
|||||||| |||||||||||||||| || |||||| ||| | ||
Sbjct 7621 CGGCTGACGGACAGCACCCCGATCCGGCTGCCGCCGCCACTGTCCGGCCTGCCGCCAACG 7562
Query 28350 CGCGAGCAGCAGCAACAGGCCCGGCGTCTGACCGAGGCTGGGGCGAAGGAGGTCGAGCGG 28409
|| | ||||||||||||||| ||||| || | ||| |||||||| ||| | |||
Sbjct 7561 CGTGCGCAGCAGCAACAGGCGCGGCGCCTCGCTGAGTCTGGGGCGCTGGATCTGACACGG 7502
Query 28410 ATCAAGGCGGCGCTTGAACCGCGCAAGCCGCCGGCAGAGACGAAACCCCGAGCGAGGGAC 28469
||||||| ||||| || ||||||||||||||||||||||| || ||| | ||||||||
Sbjct 7501 ATCAAGGAAGCGCTGGAGCCGCGCAAGCCGCCGGCAGAGACCAAGCCCAGGGCGAGGGA- 7443
Query 28470 GTCCGCACCAAGGCGTGGGTGAGGGCAGGGCTGCAGCAGATGCGGCGGGGCGTTTAGGC 28528
||| || |||||| |||| ||||| | |||||||||| | |||| ||| ||||| ||
Sbjct 7442 -TCCTCA-GAAGGCGCGGGTTAGGGCGGCGCTGCAGCAGCTACGGCAGGGTGTTTAAGC 7386
>seq176772
Length=12769
Score = 208 bits (230), Expect = 2e-49
Identities = 266/358 (74%), Gaps = 9/358 (3%)
Strand=Plus/Plus
Query 29560 ACATCCGGGTACAGGCCGATCGAAAGCAGCTTCTCCTTGCCGGCGATGCGGTACTTCCAG 29619
|| || || |||||||| | || || | ||||||||| || ||| || |||||||||
Sbjct 11476 ACCTCGGGATACAGGCCCAGCGCCAGGACCTTCTCCTTCCCCCCGAAACG-TACTTCCAG 11534
Query 29620 CGCCAGCTGCGCGCACCGGTCGGGGTGAGATAGAGGTACAGGCCGCCACCGTCGGTGATC 29679
|||||||| || ||| | ||||| |||||||||||||||||| |||||| | |
Sbjct 11535 CGCCAGCTCTTGGCGTCGGCCACGGTGACGTAGAGGTACAGGCCGCCAGCGTCGGACAGC 11594
Query 29680 TTCTGCGGTTTGTCGCTGGGCTTGGCGCGCCTGATGGCTGCGTCGGTCAGAGGCATTGGG 29739
|||||||| |||||| ||||| ||||| | ||| || ||||||||| |||| ||||
Sbjct 11595 TTCTGCGGCTTGTCGGCTGGCTTCGCGCGGCGGATCGCGAGGTCGGTCAGGGGCA-TGGG 11653
Query 29740 GGTATCG--CTTCAGTGGGTGCGGTCGGATACCCCTTGATATACCCCCACCGTCTCATGG 29797
||||||| || |||| ||||| ||||||||| ||| ||||||||||||||||| |
Sbjct 11654 GGTATCGGCTTTTCGTGG--GCGGTGCGATACCCCTAGATGTACCCCCACCGTCTCATAG 11711
Query 29798 ATTGAAACGGATTGCCCCGGTCTGCTGCGGACAATAAAAAAGCCCGGAAACCCTTGTGAT 29857
|| |||||| | | || | | ||||| || |||||| |||||| |||||||
Sbjct 11712 CCTGCAACGGAACGGCATGGACCGACGCGGAAAACGAAAAAG-CCGGAACCCCTTGTTTG 11770
Query 29858 GCGGGGGTTTCTGGGCTTCTC-CGGTCCTTGACGAACCGTTCGTTGGTGGAGGTGGGC 29914
|| ||| ||| ||||| || || || | ||| ||| |||||||||||||||
Sbjct 11771 ACGAGGGATTC-CGGCTTTTCGTGGACCCTTACGGACCCGGTATTGGTGGAGGTGGGC 11827
Score = 104 bits (114), Expect = 6e-18
Identities = 81/95 (85%), Gaps = 4/95 (4%)
Strand=Plus/Plus
Query 29829 CAATAAAAAAGCCCGGAAA--CCCTTGTGATGCGGGGGTTTCTGGGCTTCTCCGGTCCTT 29886
||||||||||||||||| | ||||| || ||||| | || |||||||||||||||||
Sbjct 3645 CAATAAAAAAGCCCGGAGATCCCCTTCTG--GCGGGAATGTCCGGGCTTCTCCGGTCCTT 3702
Query 29887 GACGAACCGTTCGTTGGTGGAGGTGGGCCCTACCG 29921
|| | |||| |||||||||||||||||| ||||||
Sbjct 3703 GAAGGACCGCTCGTTGGTGGAGGTGGGCGCTACCG 3737
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 128525471911738
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |