Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pteronotus_20parnellii_20[genbank_20GCA_5F000465405.1_202013-09-13] 177,401 sequences; 1,960,317,893 total letters Query= NC_012743.2 Length=62715 Score E Sequences producing significant alignments: (Bits) Value seq177183 129 2e-25 >seq177183 Length=17048 Score = 129 bits (142), Expect = 2e-25 Identities = 227/323 (70%), Gaps = 17/323 (5%) Strand=Plus/Minus Query 9121 TCAACAAAGTCATCCTCGTCGGCAATCTCGGCGCCGACCCGGAAACCCGCTACCTCCCGA 9180 |||| ||||||||||| ||||||||||||||| ||||||||| ||| || || Sbjct 12492 TCAATAAAGTCATCCTGGTCGGCAATCTCGGCAACGACCCGGACGTGAAGTACACCCAGA 12433 Query 9181 GCGGCGACGCAATCTCCAATATCCGTCTCGCGACGACCGATCG-CTACAAGGACAAGGCG 9239 ||||| || ||| || ||| | || || || ||| | || | ||||||||||| Sbjct 12432 GCGGCATGGCGATCACCCGCATCAGCCTGGCCACCACC-AGCGTCCGCAAGGACAAGGAT 12374 Query 9240 AGCGGCGAGTTCAAGGAAGTGACCGAGTGGCACCGCGTCGCTTTCTTCGGCCGCCTCGCC 9299 || | || ||||| ||||| ||||||||||| | ||||||||| |||| Sbjct 12373 GGCAACCAGC---AGGAACGCACCGAATGGCACCGCGTGGTGTTCTTCGGCAAGCTCGGT 12317 Query 9300 GAGATCGTCGACGAGCACCTTCGCAAGGGCGCATCGGTCTACATCGAGGG--GC--GCAT 9355 ||||||| || |||| |||| ||||||||| ||||||||| |||| || || || | Sbjct 12316 GAGATCGCCGGCGAGTACCTGCGCAAGGGCAGCTCGGTCTACGTCGAAGGCAGCCTGCGT 12257 Query 9356 CAAGACGCGGA-AGTGG-CAGGATCAATCCGGCCAGGATCGCTACACGACCGAGATCGTC 9413 | ||| | | | || ||||| |||| ||| ||| | ||||| |||||| Sbjct 12256 TACGACAAGTACACCGGCCAGGA------CGGCGTGGAGAAGTACTCCACCGATATCGTC 12203 Query 9414 GCCGACAGGATGCAGATGCTCGG 9436 ||||| |||||||||||| || Sbjct 12202 GCCGATGAGATGCAGATGCTGGG 12180 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 200129567382036