Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pteronotus_20parnellii_20[genbank_20GCA_5F000465405.1_202013-09-13]
177,401 sequences; 1,960,317,893 total letters
Query= NC_012783.2
Length=226205
Score E
Sequences producing significant alignments: (Bits) Value
seq22824 161 1e-34
>seq22824
Length=28232
Score = 161 bits (178), Expect = 1e-34
Identities = 170/224 (76%), Gaps = 0/224 (0%)
Strand=Plus/Plus
Query 9739 GTTTGAAACAACTGCTCGTCACCCCATTCCGGGTGTTCGTGTTTGAGAACATCGCAGACC 9798
|| || |||||| |||| || |||||||||| || || ||||| || || || || ||
Sbjct 24671 GTCTGGAACAACCGCTCATCGTCCCATTCCGGATGCTCCTGTTTAAGCACGTCACACACT 24730
Query 9799 CTGTTGTGTTCTCTCAGCCATATGGTGGCGTACATCATTAAACCCGGCACTAAACCAAAC 9858
||||||||||||| |||||| || |||||||||||||| | ||| ||||| | |||||
Sbjct 24731 CTGTTGTGTTCTCGCAGCCAGATCGTGGCGTACATCATCAGACCAGGCACCAGGCCAAAT 24790
Query 9859 ACTTCATTCCCCACTGCAAAGCGCAGATCATCGGGCACTTCGGGCGCATACAGCATATGC 9918
| || | |||||| ||||| ||||| | ||||| || | |||| || ||||| |
Sbjct 24791 AGCTCCTGCCCCACAGCAAACCGCAGGTGCTCGGGGACGTGAGGCGGGTAGAGCATCTCG 24850
Query 9919 ACCTGGGTCTCTTTGACGGTGGGGGGATACATTTCACCGTCAAT 9962
|||| || |||||||| ||||| || |||| || || |||||
Sbjct 24851 GCCTGAGTGTCTTTGACCGTGGGAGGGTACACCTCGCCATCAAT 24894
Score = 143 bits (158), Expect = 4e-29
Identities = 203/283 (72%), Gaps = 2/283 (1%)
Strand=Plus/Plus
Query 8894 GGACATCCCTTCACATTGGCACAAATGAGGGACTGAATGGTTGCGGTTTTCACGATGTCT 8953
|| || || ||||| || || ||||| |||||||| | || || | | ||| |
Sbjct 23075 GGGCAGCCTTTCACGTTATTGCATATGAGAGACTGAATTGAGGCAGTGTGGATGATTTTA 23134
Query 8954 AAACCTACGTCCCCGCCGAAGGTGCTGGGTTTCCAGTACGCCGGGGAGCAGATGACGTTC 9013
|||||||| || || || |||||||| || |||||||| || || || || ||
Sbjct 23135 AAACCTACTTCTCCACCAAAGGTGCTAGGCTTCCAGTAGTGAGGAGAACATATAGGATTG 23194
Query 9014 GCCATGAGCCCTTTCAAGGAAAACGGAGCCCCCAGCTCGATGATGCTCTCACCGAAGATG 9073
|||| |||||||||||||| || || || || || || | ||| ||||||| ||||||
Sbjct 23195 CCCATCAGCCCTTTCAAGGAGAAAGGCGCTCCAAGTTCTACCATGGTCTCACCAAAGATG 23254
Query 9074 GCACCGGGACGCGGTTTTTCGACGATGAAG-CCAGTGTAGAGTTCGACAGCCTCGACGTC 9132
|| | ||||| || | || || | |||| | | ||| || || || || || | |||
Sbjct 23255 GCGTCCGGACGGGGCTGCTCTACCA-GAAGAGCGGGGTACAGCTCCACGGCATCAATGTC 23313
Query 9133 GCCATAGAGGGCTTCCAACTCGGCAGCTATCTCCTTCTCACCT 9175
|||||||| ||||||| ||| ||||| || |||||||| |||
Sbjct 23314 TCCATAGAGCGCTTCCAGCTCCGCAGCCATTTCCTTCTCTCCT 23356
Score = 102 bits (112), Expect = 1e-16
Identities = 122/166 (73%), Gaps = 0/166 (0%)
Strand=Plus/Plus
Query 10115 GTTCGCTCTTACCCCATGCCCCAATCCTGTCGTGAAAGCCGGTCCTCGCACCATATCGGT 10174
|||| ||||||||| || |||| |||| | ||||| |||||||| ||| ||| ||
Sbjct 25749 GTTCTGTCTTACCCCGTGGCCCAGTCCTTTAGTGAAGGCCGGTCCGCGCTTATGATCTGT 25808
Query 10175 CCTAAAAAATTGGTGTGTAAAGTGTTGCCCGAAAAAAGCGAACATCAGGTTGGTGCCCTG 10234
| | ||||| || || || ||||| || |||| || || ||||||| || ||||||||
Sbjct 25809 CTTGAAAAACTGATGGGTGAAGTGCTGGGCGAAGAATGCAAACATCAAATTTGTGCCCTG 25868
Query 10235 GGGATCGGGGATAAAGGTCCTCCGAATAAAAACTTTGTCCACAATC 10280
|||||| || ||||| | | || | || ||| |||||||||
Sbjct 25869 GGGATCCGGAATAAACTTTTGTCTTATTATAAATTTATCCACAATC 25914
Score = 95.1 bits (104), Expect = 2e-14
Identities = 111/150 (74%), Gaps = 0/150 (0%)
Strand=Plus/Plus
Query 10387 TCACCTTTCACCCCGAGAGGAGTAGGGCAGTCACGAGGAACCGGAGGCAGAGTTCTCGTA 10446
||||||||||| || | || || ||||||||| | || ||||| ||| ||| |||
Sbjct 26362 TCACCTTTCACACCCATGGGGGTTGGGCAGTCATCGGCCACGGGAGGAAGAACTCTGGTA 26421
Query 10447 TAATAGGATAGATTCGAAAATGCTTCCCAGCTATTGTAGCCATAATCTAAGTTGTAGAGC 10506
|||||||| || || ||||| ||||||||||| ||||||||||| | ||||||
Sbjct 26422 TAATAGGAGAGGTTAGAAAAGGCTTCCCAGCTTTTGTAGCCATAGTGCGCGTTGTAAGTT 26481
Query 10507 GGGGGACTGTCAATCATCTCGGACCTGGCT 10536
|| || || || |||| | || ||||||
Sbjct 26482 GGTGGGCTATCGATCAAATGTGATCTGGCT 26511
Score = 93.3 bits (102), Expect = 6e-14
Identities = 74/89 (83%), Gaps = 0/89 (0%)
Strand=Plus/Plus
Query 9963 AACCTGATACTTCATCTTCCCATCCTTGAACAGACGCAGCTTATGCTGCTTCTCCAACGT 10022
||||||||||||||| || || |||||||| || |||||||||||||| ||||||| ||
Sbjct 25016 AACCTGATACTTCATTTTTCCGTCCTTGAAAAGGCGCAGCTTATGCTGTCTCTCCAAAGT 25075
Query 10023 TTCGCCGTAGATGTGACTGAGATCGACCT 10051
||| || || |||||| | || || ||||
Sbjct 25076 TTCACCATAAATGTGATTTAGGTCCACCT 25104
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 722123124113400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |