Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pteronotus_20parnellii_20[genbank_20GCA_5F000465405.1_202013-09-13] 177,401 sequences; 1,960,317,893 total letters Query= NC_012783.2 Length=226205 Score E Sequences producing significant alignments: (Bits) Value seq22824 161 1e-34 >seq22824 Length=28232 Score = 161 bits (178), Expect = 1e-34 Identities = 170/224 (76%), Gaps = 0/224 (0%) Strand=Plus/Plus Query 9739 GTTTGAAACAACTGCTCGTCACCCCATTCCGGGTGTTCGTGTTTGAGAACATCGCAGACC 9798 || || |||||| |||| || |||||||||| || || ||||| || || || || || Sbjct 24671 GTCTGGAACAACCGCTCATCGTCCCATTCCGGATGCTCCTGTTTAAGCACGTCACACACT 24730 Query 9799 CTGTTGTGTTCTCTCAGCCATATGGTGGCGTACATCATTAAACCCGGCACTAAACCAAAC 9858 ||||||||||||| |||||| || |||||||||||||| | ||| ||||| | ||||| Sbjct 24731 CTGTTGTGTTCTCGCAGCCAGATCGTGGCGTACATCATCAGACCAGGCACCAGGCCAAAT 24790 Query 9859 ACTTCATTCCCCACTGCAAAGCGCAGATCATCGGGCACTTCGGGCGCATACAGCATATGC 9918 | || | |||||| ||||| ||||| | ||||| || | |||| || ||||| | Sbjct 24791 AGCTCCTGCCCCACAGCAAACCGCAGGTGCTCGGGGACGTGAGGCGGGTAGAGCATCTCG 24850 Query 9919 ACCTGGGTCTCTTTGACGGTGGGGGGATACATTTCACCGTCAAT 9962 |||| || |||||||| ||||| || |||| || || ||||| Sbjct 24851 GCCTGAGTGTCTTTGACCGTGGGAGGGTACACCTCGCCATCAAT 24894 Score = 143 bits (158), Expect = 4e-29 Identities = 203/283 (72%), Gaps = 2/283 (1%) Strand=Plus/Plus Query 8894 GGACATCCCTTCACATTGGCACAAATGAGGGACTGAATGGTTGCGGTTTTCACGATGTCT 8953 || || || ||||| || || ||||| |||||||| | || || | | ||| | Sbjct 23075 GGGCAGCCTTTCACGTTATTGCATATGAGAGACTGAATTGAGGCAGTGTGGATGATTTTA 23134 Query 8954 AAACCTACGTCCCCGCCGAAGGTGCTGGGTTTCCAGTACGCCGGGGAGCAGATGACGTTC 9013 |||||||| || || || |||||||| || |||||||| || || || || || Sbjct 23135 AAACCTACTTCTCCACCAAAGGTGCTAGGCTTCCAGTAGTGAGGAGAACATATAGGATTG 23194 Query 9014 GCCATGAGCCCTTTCAAGGAAAACGGAGCCCCCAGCTCGATGATGCTCTCACCGAAGATG 9073 |||| |||||||||||||| || || || || || || | ||| ||||||| |||||| Sbjct 23195 CCCATCAGCCCTTTCAAGGAGAAAGGCGCTCCAAGTTCTACCATGGTCTCACCAAAGATG 23254 Query 9074 GCACCGGGACGCGGTTTTTCGACGATGAAG-CCAGTGTAGAGTTCGACAGCCTCGACGTC 9132 || | ||||| || | || || | |||| | | ||| || || || || || | ||| Sbjct 23255 GCGTCCGGACGGGGCTGCTCTACCA-GAAGAGCGGGGTACAGCTCCACGGCATCAATGTC 23313 Query 9133 GCCATAGAGGGCTTCCAACTCGGCAGCTATCTCCTTCTCACCT 9175 |||||||| ||||||| ||| ||||| || |||||||| ||| Sbjct 23314 TCCATAGAGCGCTTCCAGCTCCGCAGCCATTTCCTTCTCTCCT 23356 Score = 102 bits (112), Expect = 1e-16 Identities = 122/166 (73%), Gaps = 0/166 (0%) Strand=Plus/Plus Query 10115 GTTCGCTCTTACCCCATGCCCCAATCCTGTCGTGAAAGCCGGTCCTCGCACCATATCGGT 10174 |||| ||||||||| || |||| |||| | ||||| |||||||| ||| ||| || Sbjct 25749 GTTCTGTCTTACCCCGTGGCCCAGTCCTTTAGTGAAGGCCGGTCCGCGCTTATGATCTGT 25808 Query 10175 CCTAAAAAATTGGTGTGTAAAGTGTTGCCCGAAAAAAGCGAACATCAGGTTGGTGCCCTG 10234 | | ||||| || || || ||||| || |||| || || ||||||| || |||||||| Sbjct 25809 CTTGAAAAACTGATGGGTGAAGTGCTGGGCGAAGAATGCAAACATCAAATTTGTGCCCTG 25868 Query 10235 GGGATCGGGGATAAAGGTCCTCCGAATAAAAACTTTGTCCACAATC 10280 |||||| || ||||| | | || | || ||| ||||||||| Sbjct 25869 GGGATCCGGAATAAACTTTTGTCTTATTATAAATTTATCCACAATC 25914 Score = 95.1 bits (104), Expect = 2e-14 Identities = 111/150 (74%), Gaps = 0/150 (0%) Strand=Plus/Plus Query 10387 TCACCTTTCACCCCGAGAGGAGTAGGGCAGTCACGAGGAACCGGAGGCAGAGTTCTCGTA 10446 ||||||||||| || | || || ||||||||| | || ||||| ||| ||| ||| Sbjct 26362 TCACCTTTCACACCCATGGGGGTTGGGCAGTCATCGGCCACGGGAGGAAGAACTCTGGTA 26421 Query 10447 TAATAGGATAGATTCGAAAATGCTTCCCAGCTATTGTAGCCATAATCTAAGTTGTAGAGC 10506 |||||||| || || ||||| ||||||||||| ||||||||||| | |||||| Sbjct 26422 TAATAGGAGAGGTTAGAAAAGGCTTCCCAGCTTTTGTAGCCATAGTGCGCGTTGTAAGTT 26481 Query 10507 GGGGGACTGTCAATCATCTCGGACCTGGCT 10536 || || || || |||| | || |||||| Sbjct 26482 GGTGGGCTATCGATCAAATGTGATCTGGCT 26511 Score = 93.3 bits (102), Expect = 6e-14 Identities = 74/89 (83%), Gaps = 0/89 (0%) Strand=Plus/Plus Query 9963 AACCTGATACTTCATCTTCCCATCCTTGAACAGACGCAGCTTATGCTGCTTCTCCAACGT 10022 ||||||||||||||| || || |||||||| || |||||||||||||| ||||||| || Sbjct 25016 AACCTGATACTTCATTTTTCCGTCCTTGAAAAGGCGCAGCTTATGCTGTCTCTCCAAAGT 25075 Query 10023 TTCGCCGTAGATGTGACTGAGATCGACCT 10051 ||| || || |||||| | || || |||| Sbjct 25076 TTCACCATAAATGTGATTTAGGTCCACCT 25104 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 722123124113400