Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pteronotus_20parnellii_20[genbank_20GCA_5F000465405.1_202013-09-13] 177,401 sequences; 1,960,317,893 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq6383 149 1e-30 seq128274 100 5e-16 >seq6383 Length=23588 Score = 149 bits (164), Expect = 1e-30 Identities = 564/873 (65%), Gaps = 24/873 (3%) Strand=Plus/Plus Query 159644 ACATTCTTCTCGAAAAAGTTGGTCTTGCCCTCCATGGATATTGATTCCATGAACCCGAAT 159703 || |||||||| || ||||||||||| || || | || || |||||||| | || Sbjct 7264 ACTTTCTTCTCAAAGAAGTTGGTCTTCCCTTCTAGTGAGATGTTCTCCATGAAGTCAAAC 7323 Query 159704 GGGTTCTTCACGTG-ATAGCGCTTCGGAAATCCGAGAGCCGCCAGCAACCTGTCTGCCAC 159762 ||||| | ||| | | ||| ||| ||| || || || ||| | |||||| ||||| Sbjct 7324 GGGTTTTCCACTCGGAAAGC-CTTGCTAAAACCCAGCTCCAGCAGGAGCCTGTCGGCCAC 7382 Query 159763 AAATTCGATGTAGCTACACATCTGCTCACAGTTGATCCCCAGCAGCCTAACGGGGAGCGC 159822 |||||| ||||| |||| ||| || ||||| | ||| | || || | || Sbjct 7383 AAATTCAATGTACTGTTTCATCAAAGTACAATTCATCCCAATGAGCTTCACTGGCAAGGC 7442 Query 159823 TTCCGACAGAAACTCCTTCTCAATCTCGACCGCTTCGGTCACAATCTGCGAGACACGTTC 159882 |||| || ||||||| || |||| | || | | | | || | | || ||| Sbjct 7443 CTCCGTGAGGAACTCCTGTTCTATCTTAAATGCATTGATGATGATTTCCTTTACT--TTC 7500 Query 159883 GTACCCCG---GCTTGC---CCAAAATGTGGTCCTTAAACAGGAGGCACGCAAAGTCGCA 159936 | | ||| | ||| ||| ||| || |||| ||||| |||||||| || Sbjct 7501 -TGCTCCGAAGGTTTGTGTGCCA------GGTGTTTGAACATCAGGCAGGCAAAGTCACA 7553 Query 159937 GTGCAGTCCCTCGTCCCGAGAGATGAACTCGTTGGACATGATGAGGCCCGGCATGATCCC 159996 ||||| ||||| || | || | |||| |||| | ||||||| ||||| | ||| Sbjct 7554 GTGCAAGCCCTCATCTCTGCTAATAAGCTCGCTGGAGAATGTGAGGCCGGGCATCAGCCC 7613 Query 159997 ACGCGGTTTGAGCCAAAAAATGGCCGCAAAAGCACCGCTAAAAAAGATCCCCTCCACGGC 160056 ||| |||||||| || || | | |||| || || ||||| || ||||| | Sbjct 7614 TCGCTTCTTGAGCCAGAATATCGATGTGAAAGACCCAGAGAAGAAGATTCCTTCCACCTC 7673 Query 160057 CGCAAACGCCACGAGCCTCTCACCAAAAGAGGCGTTGGTGTCATGGGTCCACCTTTTGGC 160116 ||||||||||| | | ||| ||| | | ||| | |||| |||| | ||| Sbjct 7674 AGCAAACGCCACCACGCGCTCTCCATAGGTGGCCTCTTTGTCCCCAATCCAACGCAAGGC 7733 Query 160117 CCATTCAGCCTTCTTTGCGATGCACGGCATGCGCTCGACGGCGTTAAACAATCTGTCCTG 160176 ||| || |||||||| || || ||||| ||||| ||| || || | ||| Sbjct 7734 CCAGTCTGCCTTCTTCTTGACACAAGGCATCTTCTCGATGGCATTGAAGAGGAACTCCCT 7793 Query 160177 CTCCTTCACATCCTTGATCAGAGTAGCAATCAGCTTCGAGTACATTTCTGCGTGCACATT 160236 ||| || || ||||| ||| | || || |||||| || | || | || Sbjct 7794 CTCTTTGGGGTCTTTGATGTAAGTGTCGATGAGGAGGCTGTACATCTCAGAATGTATGTT 7853 Query 160237 TTCGATGGCCATCTGAAAGTTGTAGAAATATGTCGCCTC-CAGATACTGCACCTCCTGTG 160295 ||| ||||| ||||| ||| ||||| | || || ||| ||| || ||||| Sbjct 7854 TTCCATGGCGATCTGGAAGCCATAGAAGCAGCGGGCTTCTGTGAT-CTGAACTTCCTGGC 7912 Query 160296 TGAACCTTTGACCCAGATTGGCATTAACCAACCCGTCGGCGGCCGCAAAGAAAGCCAACA 160355 |||||| | ||| || |||| || | || ||| ||| |||||||| |||| | Sbjct 7913 TGAACCGCTCCACCAAGTTTTCATTCACGATGCCATCGCTGGCTGCAAAGAACGCCAGGA 7972 Query 160356 CGTGAGAGATGAAATGTCTCTCGTCTTTGTTGAGTCTCTTTTCCCAGTGTGTCACGTCTT 160415 |||| || ||||| | |||||||| | || || || |||||||| || ||| | Sbjct 7973 CGTGCGAAATGAAGTACCTCTCGTCGTCCTTCAGGGTC---TCCCAGTGCAGCAGGTCCT 8029 Query 160416 GGGCCAAATCAACCTCTTCCGCGCTCCAATTGGCAGCCTGAGCAGTTTTGTACATGGCCC 160475 || | || ||||| ||||| |||| || ||||| || | |||||||| || Sbjct 8030 TGGAAAGGTCCACCTCCTCCGCTGTCCAGAAGGAAGCCTCGGCCTTCTTGTACATCTGCC 8089 Query 160476 AGATGGCGTGCT-CTCTGATCGGAAAAGTGACA 160507 ||||| |||| | ||| ||| || || ||||| Sbjct 8090 AGATGTCGTGGTACTC-GATGGGGAAGATGACA 8121 >seq128274 Length=19531 Score = 100 bits (110), Expect = 5e-16 Identities = 115/152 (76%), Gaps = 2/152 (1%) Strand=Plus/Minus Query 203910 CCTTCTGCCACCCGTACATGTGCATGGAAGACAGTTTGCTCACGTTGGGGTCGGCCATGT 203969 ||| || ||| || || | |||||| || ||||||| ||| || || || || | Sbjct 14654 CCTGCTTCCAGCCATAGAAGTGCATACTAGTGAGTTTGCCATAGTTAGGCTCAGCAATAT 14595 Query 203970 GAATGTTCAGAGACTGGCTTTGGTCGATGAAAGGCGCC-CGATCTGCGGCCATATTGATA 204028 | ||||||| |||||||||||| || |||||| ||||| | ||| || ||||| |||| | Sbjct 14594 GGATGTTCAAAGACTGGCTTTGATCAATGAAA-GCGCCTCTATCAGCTGCCATCTTGAGA 14536 Query 204029 ATGGTCTTCTGCGAAATCTCCCACACCGTCTT 204060 | ||| ||||| || || ||||| |||||||| Sbjct 14535 ACGGTTTTCTGAGAGATTTCCCATACCGTCTT 14504 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 793391933404560