Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pteronotus_20parnellii_20[genbank_20GCA_5F000465405.1_202013-09-13] 177,401 sequences; 1,960,317,893 total letters Query= NC_014458.1 Length=59598 Score E Sequences producing significant alignments: (Bits) Value seq161357 87.8 7e-13 >seq161357 Length=2110 Score = 87.8 bits (96), Expect = 7e-13 Identities = 111/150 (74%), Gaps = 2/150 (1%) Strand=Plus/Plus Query 53369 GTGGCGCTGATGCCTGATGCGCATTTCGGTAAGGGCAGCAGTGTCGGCACGGTGATCCCG 53428 ||||| ||||||| || | ||| | || |||||| | |||||| ||||||||||| Sbjct 1450 GTGGCCGTGATGCCGGACGTGCACCTGGGAAAGGGCGCGACCGTCGGCTCGGTGATCCCG 1509 Query 53429 ACCGAGGGCGCTGTGATCCCGGCGGCCGTCGGCGTCGATATTGGCTGCGGCATGATCGCA 53488 ||| || || | || |||||||| || ||||| || || |||||||||||| ||| Sbjct 1510 ACCCGCGGAGCGATCATTCCGGCGGCGGTGGGCGTGGACATCGGCTGCGGCATGGCCGCG 1569 Query 53489 GCCCGCACCACG-TACACGGCGAACGATCT 53517 | ||||| ||| | || ||| ||||| || Sbjct 1570 GTGCGCACGACGCTGCA-GGCCAACGACCT 1598 Score = 86.0 bits (94), Expect = 2e-12 Identities = 86/112 (77%), Gaps = 0/112 (0%) Strand=Plus/Plus Query 53696 CAGCTCGGCACGCTGGGCGGCGGCAATCACTTCATCGAGCTGTGCCTCGACCACCTCGAC 53755 ||||| ||||||||||| || ||||| |||||||||||||||||||| || | || Sbjct 1786 CAGCTGGGCACGCTGGGAGGTGGCAACCACTTCATCGAGCTGTGCCTGGATGAAACGGAT 1845 Query 53756 CGCGTGTGGTTGTTCCTGCACTCCGGTTCGCGTGGCGTCGGTAACAAGATCG 53807 ||||||| | | |||||| ||| ||||||||| ||| ||| ||||| Sbjct 1846 GCCGTGTGGGTAATGCTGCACAGCGGCTCGCGTGGCACCGGGAACCTGATCG 1897 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 190190491864720