Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pteronotus_20parnellii_20[genbank_20GCA_5F000465405.1_202013-09-13] 177,401 sequences; 1,960,317,893 total letters Query= NC_015266.1 Length=40555 Score E Sequences producing significant alignments: (Bits) Value seq174924 140 8e-29 >seq174924 Length=7573 Score = 140 bits (154), Expect = 8e-29 Identities = 299/443 (67%), Gaps = 3/443 (1%) Strand=Plus/Plus Query 30646 AGCACGAGTTCGAGCCGGGCAGCGTGTTCCAGCT-CATGCGACCGGACATCAACCAGGAG 30704 |||||||||| | | ||| || | |||||| | || | ||| ||| | | ||||| Sbjct 2765 AGCACGAGTTTGCACTTGGCTCGGTATACCAGCTGCGTGAGGCCG-ACACCGATCAGGAA 2823 Query 30705 GTGTACGGCCTGCCCGAATATCTCAGCTCGCTTCACTCGGCCTGGCTGAACGAGTCGTCG 30764 | || || |||| |||| | | | | || ||||| ||| ||||| ||| | Sbjct 2824 ATCTATGGGATGCCGGAATGGTTGGCCGTGGTGCAGTCGGCGCTGCTCAACGAATCGGCA 2883 Query 30765 ACGCTGTTCCGGCGGAAGTATTACGAAAACGGTAGCCACGCCGGCTTCATCCTCTACATG 30824 ||| ||||||| || ||| ||| || ||| || ||||| ||||||| |||||| Sbjct 2884 ACGTTGTTCCGTCGCCGGTACTACTCAAGCGGCTCGCATGCCGGGTTCATCCATTACATG 2943 Query 30825 ACCGACGCGGCGCAGAAGCAGGAGGATGTCGACAACATGCGCACGGCGTTGAAGAACGCG 30884 |||||| || || | || ||| || ||| | |||| |||| || || || Sbjct 2944 ACCGACCCGCAGCCGGAGGGCATGGACGTGGACGCCTTGCGTGAGGCGCTGCGAGACTCG 3003 Query 30885 AAGGGGCCGGGCAATTTCCGCAACGTGTTCATGTACGCGCCGGGCGGGAAAAAGGACGGT 30944 ||||| ||||||||||||||| || || || || |||| || || |||||||| Sbjct 3004 CGTGGGCCAGGCAATTTCCGCAACCTGCTCGTGCACTCGCCCAATGGCAACAAGGACGGG 3063 Query 30945 ATCCAGCTCATCCCAGTGTCCGAGGTCGCGGCGAAGGACGAGTTCTTCAACATCAAGAAC 31004 | ||||| || || | ||| || || || ||||| |||||| | |||||| | Sbjct 3064 TTGCAGCTGATTCCTATCAGCGAAGTTGCCGCAAAGGATGAGTTCACCGGGATCAAGCGC 3123 Query 31005 GTGACGCGCGACGACCTGCTCGCCGCGCATCGCGTGCCGCCGCAACTGCTCGGTATCGTG 31064 ||||| || || ||| | || || |||| ||| | | ||||| |||||||||||||| Sbjct 3124 GTGACCCGTGATGACATACTGGCGGCGCTGCGCAT-CACCCGCAGCTGCTCGGTATCGTC 3182 Query 31065 CCGAGCAATTCGGGCGGGTTCGG 31087 || ||| | || || ||||| Sbjct 3183 CCTCAGAATGCTGGTGGATTCGG 3205 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 129381265259954