Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pteronotus_20parnellii_20[genbank_20GCA_5F000465405.1_202013-09-13]
177,401 sequences; 1,960,317,893 total letters
Query= NC_015266.1
Length=40555
Score E
Sequences producing significant alignments: (Bits) Value
seq174924 140 8e-29
>seq174924
Length=7573
Score = 140 bits (154), Expect = 8e-29
Identities = 299/443 (67%), Gaps = 3/443 (1%)
Strand=Plus/Plus
Query 30646 AGCACGAGTTCGAGCCGGGCAGCGTGTTCCAGCT-CATGCGACCGGACATCAACCAGGAG 30704
|||||||||| | | ||| || | |||||| | || | ||| ||| | | |||||
Sbjct 2765 AGCACGAGTTTGCACTTGGCTCGGTATACCAGCTGCGTGAGGCCG-ACACCGATCAGGAA 2823
Query 30705 GTGTACGGCCTGCCCGAATATCTCAGCTCGCTTCACTCGGCCTGGCTGAACGAGTCGTCG 30764
| || || |||| |||| | | | | || ||||| ||| ||||| ||| |
Sbjct 2824 ATCTATGGGATGCCGGAATGGTTGGCCGTGGTGCAGTCGGCGCTGCTCAACGAATCGGCA 2883
Query 30765 ACGCTGTTCCGGCGGAAGTATTACGAAAACGGTAGCCACGCCGGCTTCATCCTCTACATG 30824
||| ||||||| || ||| ||| || ||| || ||||| ||||||| ||||||
Sbjct 2884 ACGTTGTTCCGTCGCCGGTACTACTCAAGCGGCTCGCATGCCGGGTTCATCCATTACATG 2943
Query 30825 ACCGACGCGGCGCAGAAGCAGGAGGATGTCGACAACATGCGCACGGCGTTGAAGAACGCG 30884
|||||| || || | || ||| || ||| | |||| |||| || || ||
Sbjct 2944 ACCGACCCGCAGCCGGAGGGCATGGACGTGGACGCCTTGCGTGAGGCGCTGCGAGACTCG 3003
Query 30885 AAGGGGCCGGGCAATTTCCGCAACGTGTTCATGTACGCGCCGGGCGGGAAAAAGGACGGT 30944
||||| ||||||||||||||| || || || || |||| || || ||||||||
Sbjct 3004 CGTGGGCCAGGCAATTTCCGCAACCTGCTCGTGCACTCGCCCAATGGCAACAAGGACGGG 3063
Query 30945 ATCCAGCTCATCCCAGTGTCCGAGGTCGCGGCGAAGGACGAGTTCTTCAACATCAAGAAC 31004
| ||||| || || | ||| || || || ||||| |||||| | |||||| |
Sbjct 3064 TTGCAGCTGATTCCTATCAGCGAAGTTGCCGCAAAGGATGAGTTCACCGGGATCAAGCGC 3123
Query 31005 GTGACGCGCGACGACCTGCTCGCCGCGCATCGCGTGCCGCCGCAACTGCTCGGTATCGTG 31064
||||| || || ||| | || || |||| ||| | | ||||| ||||||||||||||
Sbjct 3124 GTGACCCGTGATGACATACTGGCGGCGCTGCGCAT-CACCCGCAGCTGCTCGGTATCGTC 3182
Query 31065 CCGAGCAATTCGGGCGGGTTCGG 31087
|| ||| | || || |||||
Sbjct 3183 CCTCAGAATGCTGGTGGATTCGG 3205
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 129381265259954
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |