Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pteronotus_20parnellii_20[genbank_20GCA_5F000465405.1_202013-09-13]
177,401 sequences; 1,960,317,893 total letters
Query= NC_015960.1
Length=175699
Score E
Sequences producing significant alignments: (Bits) Value
seq96587 196 5e-45
seq41434 178 1e-39
seq39192 147 2e-30
seq128274 102 9e-17
seq176809 87.8 2e-12
seq32390 82.4 9e-11
>seq96587
Length=11614
Score = 196 bits (216), Expect = 5e-45
Identities = 520/789 (66%), Gaps = 19/789 (2%)
Strand=Plus/Minus
Query 47022 TAATACATACCAGTCTTTAAACCTAAACTCCATCCATAGAAATGCATACTAGTTAATTTA 47081
||| | || |||||||| ||||| ||| ||| |||| ||||||||||| ||| |
Sbjct 3540 TAACATATCCCAGTCTTCAAACCCTGCTTCCTGCCACAGAAGTGCATACTAGTGAATATG 3481
Query 47082 GAATAACTAGGTTCTGAAATATGAATATTAAGAGATTGACTCTGATCAATAAATGCACCT 47141
||| |||| || | ||| || || || | ||| || | ||| |||| || || |||
Sbjct 3480 CCATAGTTAGGCTCAGCAATGTGGATGTTCAAAGACTGGTTTTGACCAATGAAAGCGCCT 3421
Query 47142 CTATCAGCTGCCATATCTAAAATAACCCTTTGTGGTATCTCCCATACTGTTTTATAAATT 47201
| |||||||||||| | | || | | || | || |||||||| || ||||||| |
Sbjct 3420 CCATCAGCTGCCATCTTGAGAACAGTTTTCTGAGAGATTTCCCATACAGTCTTATAAAGT 3361
Query 47202 TGTTTAATGTCTTCTGGGAGATTA--GTAT--TTTGAATAGATCCTCCgttttctataat 47257
|| || | ||| || | || || |||| | |||||||| || | | | |||||
Sbjct 3360 TGCTTCAGGTCGTCCAG-AGTTTCTGGTATGCTCTGAATAGAGCCATTGCATGCAATAAT 3302
Query 47258 tttgttttttaa---ttcatttgaccaaagttttcgttcagtta-atgtttttaaAAGAT 47313
| ||||| | |||||| || ||| | ||||| | || | | ||| |
Sbjct 3301 CTGATTTTTCATCTCTTCATTCCAC--AAGCCC-CACTCAGTGAGATCTCTCAGTAAG-T 3246
Query 47314 GAGGATTAACAATTTGAAATTCTCCAGATAGTACTCTACGGCTATATATATTACTTGTAT 47373
||||||| |||| ||||||||||| || | |||| | | || || || || ||||
Sbjct 3245 GAGGATTTACAACCTGAAATTCTCCTGACAAGGCTCTGCAAGTGTAGATGTTGCTGGTAT 3186
Query 47374 ATGGTTCTATAGATTCA-TTATTTCCAAAAATTTGAGCAGTTGATGCTGTAGGCATGGAT 47432
| | ||| || || ||| |||||| | | ||| |||||||| || || ||||||| |
Sbjct 3185 AAGATTCAATGGACTCACTTATTTTCCAGAATCTGAGCAGTGGAAGCAATAGGCATCGGG 3126
Query 47433 GCAACTAATAAGCTATTTCTTACTCCATATTTTTGTATCTNNNNNNNNNNNNGTTTCCAA 47492
|||| | ||| || ||||||| ||||| || | |||| ||||||
Sbjct 3125 GCAATAAGTAAACTGTTTCTTATACCATACTTCTCAATCTTCTCCTTGAGAAATTTCCAG 3066
Query 47493 TCCCAAAGATCTGATGGAACAACATTCCAAAAATCATATTGAAGAATTCCTTTACTTATC 47552
||| | || |||| ||| || |||||| | |||||| ||||| |||||||| || |
Sbjct 3065 TCCTATAGGTCTGTGGGAGTAATATTCCACATATCATACTGAAGGATTCCTTTGCTGACT 3006
Query 47553 GGAGAACCATTATATGTTTTATAAGGACCGTATAGTTTAGCGAGTTCACAACTTGCTTCC 47612
||||| || || || ||| ||| | || | || | || |||| || ||||||
Sbjct 3005 GGAGAGCCCTTGTAGATTTCATACAGGCCATGCTCCTTGGTCAGAACACAGCTGGCTTCC 2946
Query 47613 AATGCACTATAATATATTGTTTCAAATATTTTTATGTTTAGATTCCTT-GCTTCTGATGA 47671
|| || | |||||| || ||||| || | ||| | || || ||| || ||||
Sbjct 2945 AAGGCTCCATAATAAATGGTTTCGAAGA-TTTGCTAATTCAATAACTTGGCCTCTGGACT 2887
Query 47672 TTCAAAAGGATANNNNNNNNNNNNNAATGTATCTGCCAATCCTTGAACACCAATACCAAT 47731
||||||||||| || | ||||||| ||||| || ||||| |||||
Sbjct 2886 CTCAAAAGGATACCTCATAAGAATAAAAGCCTCTGCCAGACCTTGTACTCCAATTCCAAT 2827
Query 47732 TGGTCTATGAGTTTTATTAGAAAACTCAGCTTCTGGTAATGGATATTTGTTTATATCTAT 47791
|| ||| |||||| || | | || ||||| | | || ||| || || ||
Sbjct 2826 GGG---CTGACATTTATTTGATACATTTGCCTCTGGGACACGGTAGGAGTTAATGTCAAT 2770
Query 47792 AATTTTATT 47800
|||||||||
Sbjct 2769 AATTTTATT 2761
>seq41434
Length=11022
Score = 178 bits (196), Expect = 1e-39
Identities = 503/764 (66%), Gaps = 8/764 (1%)
Strand=Plus/Minus
Query 18657 CATTACTCCCATTTTTTGATATTCGGCAACTCTTTTTTCAAAGAAATTAGTTTTTCCCTC 18716
||| | |||||| | ||||||||| | | ||||| |||||||| || || || |||||
Sbjct 7896 CATCATTCCCATCCTCTGATATTCGCCTTCGCTTTTCTCAAAGAAGTTGGTCTTCCCCTC 7837
Query 18717 TAATGATATACATTCCATAAAATCAAATGGATTTTTTACATTATATAtttttttGAATCC 18776
| ||| ||| ||||| || ||||| | |||| || | | || | || ||
Sbjct 7836 CAGTGAAATATTCTCCATGAAGTCAAACCGGTTTTCAACTTGGAAAGCCTTGCTAAAACC 7777
Query 18777 TAATTCTAATAGTAGTCTATCCGCTACAAATTTAATATATGTGTTCATCATATCACAATT 18836
|| || | || || || || || | |||| ||| || ||||||| | |||||
Sbjct 7776 CAACTCCAGCAGGAGCCTGTCAGCCATGAATTGAATGTACTGCTTCATCAAAGTGCAATT 7717
Query 18837 CATTCCTATTAATTTAACAGGTAGTGCATCTGTAAGAAATTCTTGTTCTATATTTACTGC 18896
||| || || | || || || | || || || || || || | |||||| | || ||
Sbjct 7716 CATGCCAATGAGCTTCACTGGCAAGGCCTCGGTGAGGAACTCCTCTTCTATCCTAACCGC 7657
Query 18897 CTCTGATA--TAATAGATACAACTCTATCTTCATTAGGAGGGTATAGAAGATGTTTAAAC 18954
| | ||| || | || | |||| | || ||| ||| | || ||||| |||
Sbjct 7656 AT-TAATAATTATTTCATTTA-CTCTCTGCTCTGAAGGTTTGTACAACAGGTGTTTGAAC 7599
Query 18955 ATCAAACATGCAAAATCACAATG-TAGTCCCTCGTCTCTACTTATCAATTCATTAGAAAA 19013
|||| || ||||| || || || ||| ||||| ||||| || || | || | || ||
Sbjct 7598 ATCAGGCAGGCAAAGTCCCAGTGATAG-CCCTCATCTCTGCTAATAAGCTCGCTGGAGAA 7540
Query 19014 TGTTAAACCAGGCATCAGTCCTCttttttttAACCAGAATATAGAAGCAAATGATCCAGA 19073
||| | |||||||||||| |||| || | | ||||||||| || | || || |||||
Sbjct 7539 TGTGAGACCAGGCATCAGCCCTCGCTTCCTGAGCCAGAATATTGATGTGAAAGACCCAGA 7480
Query 19074 AAAGAATATACCTTCTACTGCTGCAAAAGCAACTAGTCTTTCTCCATAACTAGCATCATT 19133
|||||| | |||| || | ||||| || || | |||||| | | | || ||
Sbjct 7479 AAAGAAGGTTCCTTGCACCTCAGCAAAGGCCACCACATGCTCTCCACAGGTGGTCTCTTT 7420
Query 19134 ATTATGAATCCATTTCAGTGCCCAATCAGCCTTCTTTTTTACACATGGCATTGTCTCTAT 19193
| ||||| || ||||| | ||||||| || ||||| ||||| | |
Sbjct 7419 GTCCCCGATCCAGCGCAAGGCCCAGTATACCTTCTTCTTGACACAAGGCATCAGTTTGAA 7360
Query 19194 AGAATTAAATAGATACATACGCTCATCTGT-ATCTTTAACATATGCATCTATCAATAAAC 19252
| ||| || || || | || | ||| |||||| | ||| | | | | | |
Sbjct 7359 GGCATTGAAGAGGAACTCCCTTTCCT-TGTGATCTTTGATATAAGTGTTGAGGAGGAGGC 7301
Query 19253 TGTACATTTCTGAATGAATATTTTCTATAGCCATCTGAAATCCGTAAAAACATCTTGCTT 19312
||||||| || ||||| |||||||| || || ||||| || ||||| || || | ||||
Sbjct 7300 TGTACATCTCAGAATGTATATTTTCCATGGCAATCTGGAAGCCGTAGAAGCAGCAGGCTT 7241
Query 19313 CTGTTATCTGTACTTCACTACAAAATCTTTCGACCAAATTTTCATTAACTATTCCATCAC 19372
|||| ||||| |||| | | | || ||||| |||||||| || || |||| ||
Sbjct 7240 CTGTGATCTGAACTTGCTGGCTATACTGCTCCACCAAGTTTTCATTCACAATGCCATTAC 7181
Query 19373 TAGCTGCAAAAAATGCTAATACATGTTTAATAAAATGTTTTTCA 19416
| ||| |||| ||| | | || || ||| || || ||||||
Sbjct 7180 TTGCTACAAAGAATCCCAGGACGTGAGAAATGAAGTGCTTTTCA 7137
>seq39192
Length=20454
Score = 147 bits (162), Expect = 2e-30
Identities = 514/793 (65%), Gaps = 27/793 (3%)
Strand=Plus/Minus
Query 18612 TTAAAAATCAACATCCAAAGAAAAAGAATTCTCTTCATTAGAATT--CATTACTCCCATT 18669
||| || | | ||||||| | ||||| ||||||| | || | ||| ||||||||
Sbjct 14653 TTAGAAGTTAGCATCCAAGGTGAAAGAGTTCTCTT--TGGGACTGGACATCACTCCCATC 14596
Query 18670 TTTTGATATTCGGCAACTCTTTT--TTCAAAGAAA------TTAGTTTTTCCCTCTAATG 18721
| ||||| || | |||||| | |||||| ||| || || || | || | ||
Sbjct 14595 CTCTGATACTCACCTACTCTTCTCTTTCAAACAAAAGGATGTTTGTCTTCCTTTCCAGTG 14536
Query 18722 ATATACATTCCATAAAATCAAATGGATTTTTTACATTATATAtttttttGAATCCTAATT 18781
| | |||||| || |||||||| |||| || | | || || | || | |
Sbjct 14535 AAGTGTTTTCCATGAAGTCAAATGGGTTTTAGACTTGGAAAGCCTTGTTACAACCCAGCT 14476
Query 18782 CTAATAGTAGTCTATCCGCTACAAATTTAATATATGTGTTCATCATATCACAATTCATTC 18841
| | || || || | || ||||||| ||| || |||| || | ||||||||| |
Sbjct 14475 CCAGCAGGAGCCTGTTGGCCACAAATTCAATGTACTGCTTCACCAAAGTACAATTCATCC 14416
Query 18842 CTATTAATTTAACAGGTAGTGCATCTGTAAGAAATTCTTGTTCTATATTTACTGCCTCTG 18901
| | | || || || | || ||||| || || | |||| ||| | || | | ||
Sbjct 14415 CATTGAGCTTCACTGGCAAGGCCTCTGTGAGGAACTTCTGTTTTATCCTAACCACAT-TG 14357
Query 18902 ATATAATAGATACA---ACTCTATCTTCATTAGGAGGGTATAGAAGATGTTTAAACATCA 18958
||| || | || ||||| | || | | || ||| || ||||| |||||||
Sbjct 14356 ATA--ATGATTTCATTTACTCTCTGATCCAAATGTTTGTGTAGCAGGTGTTTGAACATCA 14299
Query 18959 AACATGCAAAATCACAATGTAGTCCCTCGTCTCTACTTATCAATTCATTAGAAAATGTTA 19018
|| ||||| ||||| || | ||||| ||||| | || | ||||| || ||||| |
Sbjct 14298 GGCAGGCAAAGTCACAGTGCAA-CCCTCATCTCTGTTAATAAGCTCATTGGAGAATGTGA 14240
Query 19019 AACCAGGCATCAGTCCTCttttttttAACCAGAATATAGAAGCAAATGATCCAGAAAAGA 19078
||||||||||| |||| || || | || |||||| | | | || ||||||||||
Sbjct 14239 GGCCAGGCATCAGCCCTCGCTTCTTGAGCCCGAATATCAATGTGGAAGACCCAGAAAAGA 14180
Query 19079 ATATACCTTCTACTGCTGCAAAAGCAACTAGTCTTTCTCCATAACTAGCATCATTATTAT 19138
| || ||||| | || ||||| | || | | |||||||| || || || |
Sbjct 14179 AGATTCCTTCCATGGCAGCAAAGGTCACCACACGATCTCCATAGGGGGCCTCTTTGTCCC 14120
Query 19139 GAATCCATTTCAGTGCCCAATCAGCCTTCTTTTTTACACATGGCATTGTCTCTATAGAAT 19198
|||||| || || || || | |||| || ||||| ||||| | || || |
Sbjct 14119 CAATCCAACGCAAGGCTCAGTCTG---TCTTCTTGACACAAGGCATCATTTCAATGACGT 14063
Query 19199 TAAATAGATACATACGCTCATCT---GTATCTTTAACATATGCATCTATCAATAAACTGT 19255
| | ||| || | ||| ||| | ||| || || | ||||| | || || |
Sbjct 14062 TGA--AGAGGCACTCCCTCTTCTTGGGGTCCTTGAATGTAAGTGTCTATGAGGAAGCTAT 14005
Query 19256 ACATTTCTGAATGAATATTTTCTATAGCCATCTGAAATCCGTAAAAACATCTTGCTTCTG 19315
||| || ||||| || ||||| || || | ||| || ||||| || || | |||| ||
Sbjct 14004 ACACCTCAGAATGTATGTTTTCCATGGCAACCTGGAAGCCGTAGAAGCAGCAGGCTTTTG 13945
Query 19316 TTATCTGTACTTCACTACAAAATCTTTCGACCAAATTTTCATTAACTATTCCATCACTAG 19375
| ||||| ||||| | ||| | || ||||| ||| |||| | || ||||||||
Sbjct 13944 TGATCTGAACTTCCTGGCTAAACCGCTCCACCAAGTTTGCATTCATGATGCCATCACTCA 13885
Query 19376 CTGCAAAAAATGC 19388
||||||| || ||
Sbjct 13884 CTGCAAAGAACGC 13872
>seq128274
Length=19531
Score = 102 bits (112), Expect = 9e-17
Identities = 103/134 (77%), Gaps = 0/134 (0%)
Strand=Plus/Minus
Query 47328 TGAAATTCTCCAGATAGTACTCTACGGCTATATATATTACTTGTATATGGTTCTATAGAT 47387
||||||||||| || | ||||| || |||| || || || ||||| ||||| || ||
Sbjct 12370 TGAAATTCTCCTGACAAGACTCTGCGAGTATAGATGTTGCTGGTATAAGGTTCAATGGAC 12311
Query 47388 TCATTATTTCCAAAAATTTGAGCAGTTGATGCTGTAGGCATGGATGCAACTAATAAGCTA 47447
||||||||||| | ||| |||||||| || || |||||||| | |||| | ||| ||
Sbjct 12310 TCATTATTTCCCAGAATCTGAGCAGTGGAAGCAGTAGGCATTGGGGCAATAAGTAAACTG 12251
Query 47448 TTTCTTACTCCATA 47461
||||||| |||||
Sbjct 12250 TTTCTTATACCATA 12237
Score = 102 bits (112), Expect = 9e-17
Identities = 124/169 (73%), Gaps = 0/169 (0%)
Strand=Plus/Minus
Query 47050 TCCATCCATAGAAATGCATACTAGTTAATTTAGAATAACTAGGTTCTGAAATATGAATAT 47109
|||| |||||||| ||||||||||| | ||| ||| |||| || | |||||| || |
Sbjct 14648 TCCAGCCATAGAAGTGCATACTAGTGAGTTTGCCATAGTTAGGCTCAGCAATATGGATGT 14589
Query 47110 TAAGAGATTGACTCTGATCAATAAATGCACCTCTATCAGCTGCCATATCTAAAATAACCC 47169
| | ||| || || |||||||| || || ||||||||||||||||| | | ||
Sbjct 14588 TCAAAGACTGGCTTTGATCAATGAAAGCGCCTCTATCAGCTGCCATCTTGAGAACGGTTT 14529
Query 47170 TTTGTGGTATCTCCCATACTGTTTTATAAATTTGTTTAATGTCTTCTGG 47218
| || | || |||||||| || ||||||| ||| || | ||| || ||
Sbjct 14528 TCTGAGAGATTTCCCATACCGTCTTATAAAGTTGCTTCAGGTCATCAGG 14480
>seq176809
Length=13038
Score = 87.8 bits (96), Expect = 2e-12
Identities = 72/87 (83%), Gaps = 3/87 (3%)
Strand=Plus/Plus
Query 19334 AAAATCTTTCGACCAAATTTTCATTAACTATTCCATCACTAGCTGCAAAAAATGCTAATA 19393
|||||||| |||||||||||||| || ||||||||||| ||||||||||| ||||| |
Sbjct 4232 AAAATCTT---ACCAAATTTTCATTTACAATTCCATCACTGGCTGCAAAAAAGGCTAAGA 4288
Query 19394 CATGTTTAATAAAATGTTTTTCATCTG 19420
||| |||||||| || |||||||
Sbjct 4289 TATGAGAAATAAAATACTTCTCATCTG 4315
>seq32390
Length=18494
Score = 82.4 bits (90), Expect = 9e-11
Identities = 69/85 (81%), Gaps = 0/85 (0%)
Strand=Plus/Minus
Query 18673 TGATATTCGGCAACTCTTTTTTCAAAGAAATTAGTTTTTCCCTCTAATGATATACATTCC 18732
||||| || | ||||| ||| ||||||||||| ||||| || ||||| || || ||||
Sbjct 8431 TGATACTCTGAAACTCGTTTCTCAAAGAAATTTGTTTTCCCTTCTAAAGAAATGTTTTCC 8372
Query 18733 ATAAAATCAAATGGATTTTTTACAT 18757
||||||||||| ||||||| | |||
Sbjct 8371 ATAAAATCAAAGGGATTTTCTGCAT 8347
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 560862316709640
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