Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pteronotus_20parnellii_20[genbank_20GCA_5F000465405.1_202013-09-13] 177,401 sequences; 1,960,317,893 total letters Query= NC_015960.1 Length=175699 Score E Sequences producing significant alignments: (Bits) Value seq96587 196 5e-45 seq41434 178 1e-39 seq39192 147 2e-30 seq128274 102 9e-17 seq176809 87.8 2e-12 seq32390 82.4 9e-11 >seq96587 Length=11614 Score = 196 bits (216), Expect = 5e-45 Identities = 520/789 (66%), Gaps = 19/789 (2%) Strand=Plus/Minus Query 47022 TAATACATACCAGTCTTTAAACCTAAACTCCATCCATAGAAATGCATACTAGTTAATTTA 47081 ||| | || |||||||| ||||| ||| ||| |||| ||||||||||| ||| | Sbjct 3540 TAACATATCCCAGTCTTCAAACCCTGCTTCCTGCCACAGAAGTGCATACTAGTGAATATG 3481 Query 47082 GAATAACTAGGTTCTGAAATATGAATATTAAGAGATTGACTCTGATCAATAAATGCACCT 47141 ||| |||| || | ||| || || || | ||| || | ||| |||| || || ||| Sbjct 3480 CCATAGTTAGGCTCAGCAATGTGGATGTTCAAAGACTGGTTTTGACCAATGAAAGCGCCT 3421 Query 47142 CTATCAGCTGCCATATCTAAAATAACCCTTTGTGGTATCTCCCATACTGTTTTATAAATT 47201 | |||||||||||| | | || | | || | || |||||||| || ||||||| | Sbjct 3420 CCATCAGCTGCCATCTTGAGAACAGTTTTCTGAGAGATTTCCCATACAGTCTTATAAAGT 3361 Query 47202 TGTTTAATGTCTTCTGGGAGATTA--GTAT--TTTGAATAGATCCTCCgttttctataat 47257 || || | ||| || | || || |||| | |||||||| || | | | ||||| Sbjct 3360 TGCTTCAGGTCGTCCAG-AGTTTCTGGTATGCTCTGAATAGAGCCATTGCATGCAATAAT 3302 Query 47258 tttgttttttaa---ttcatttgaccaaagttttcgttcagtta-atgtttttaaAAGAT 47313 | ||||| | |||||| || ||| | ||||| | || | | ||| | Sbjct 3301 CTGATTTTTCATCTCTTCATTCCAC--AAGCCC-CACTCAGTGAGATCTCTCAGTAAG-T 3246 Query 47314 GAGGATTAACAATTTGAAATTCTCCAGATAGTACTCTACGGCTATATATATTACTTGTAT 47373 ||||||| |||| ||||||||||| || | |||| | | || || || || |||| Sbjct 3245 GAGGATTTACAACCTGAAATTCTCCTGACAAGGCTCTGCAAGTGTAGATGTTGCTGGTAT 3186 Query 47374 ATGGTTCTATAGATTCA-TTATTTCCAAAAATTTGAGCAGTTGATGCTGTAGGCATGGAT 47432 | | ||| || || ||| |||||| | | ||| |||||||| || || ||||||| | Sbjct 3185 AAGATTCAATGGACTCACTTATTTTCCAGAATCTGAGCAGTGGAAGCAATAGGCATCGGG 3126 Query 47433 GCAACTAATAAGCTATTTCTTACTCCATATTTTTGTATCTNNNNNNNNNNNNGTTTCCAA 47492 |||| | ||| || ||||||| ||||| || | |||| |||||| Sbjct 3125 GCAATAAGTAAACTGTTTCTTATACCATACTTCTCAATCTTCTCCTTGAGAAATTTCCAG 3066 Query 47493 TCCCAAAGATCTGATGGAACAACATTCCAAAAATCATATTGAAGAATTCCTTTACTTATC 47552 ||| | || |||| ||| || |||||| | |||||| ||||| |||||||| || | Sbjct 3065 TCCTATAGGTCTGTGGGAGTAATATTCCACATATCATACTGAAGGATTCCTTTGCTGACT 3006 Query 47553 GGAGAACCATTATATGTTTTATAAGGACCGTATAGTTTAGCGAGTTCACAACTTGCTTCC 47612 ||||| || || || ||| ||| | || | || | || |||| || |||||| Sbjct 3005 GGAGAGCCCTTGTAGATTTCATACAGGCCATGCTCCTTGGTCAGAACACAGCTGGCTTCC 2946 Query 47613 AATGCACTATAATATATTGTTTCAAATATTTTTATGTTTAGATTCCTT-GCTTCTGATGA 47671 || || | |||||| || ||||| || | ||| | || || ||| || |||| Sbjct 2945 AAGGCTCCATAATAAATGGTTTCGAAGA-TTTGCTAATTCAATAACTTGGCCTCTGGACT 2887 Query 47672 TTCAAAAGGATANNNNNNNNNNNNNAATGTATCTGCCAATCCTTGAACACCAATACCAAT 47731 ||||||||||| || | ||||||| ||||| || ||||| ||||| Sbjct 2886 CTCAAAAGGATACCTCATAAGAATAAAAGCCTCTGCCAGACCTTGTACTCCAATTCCAAT 2827 Query 47732 TGGTCTATGAGTTTTATTAGAAAACTCAGCTTCTGGTAATGGATATTTGTTTATATCTAT 47791 || ||| |||||| || | | || ||||| | | || ||| || || || Sbjct 2826 GGG---CTGACATTTATTTGATACATTTGCCTCTGGGACACGGTAGGAGTTAATGTCAAT 2770 Query 47792 AATTTTATT 47800 ||||||||| Sbjct 2769 AATTTTATT 2761 >seq41434 Length=11022 Score = 178 bits (196), Expect = 1e-39 Identities = 503/764 (66%), Gaps = 8/764 (1%) Strand=Plus/Minus Query 18657 CATTACTCCCATTTTTTGATATTCGGCAACTCTTTTTTCAAAGAAATTAGTTTTTCCCTC 18716 ||| | |||||| | ||||||||| | | ||||| |||||||| || || || ||||| Sbjct 7896 CATCATTCCCATCCTCTGATATTCGCCTTCGCTTTTCTCAAAGAAGTTGGTCTTCCCCTC 7837 Query 18717 TAATGATATACATTCCATAAAATCAAATGGATTTTTTACATTATATAtttttttGAATCC 18776 | ||| ||| ||||| || ||||| | |||| || | | || | || || Sbjct 7836 CAGTGAAATATTCTCCATGAAGTCAAACCGGTTTTCAACTTGGAAAGCCTTGCTAAAACC 7777 Query 18777 TAATTCTAATAGTAGTCTATCCGCTACAAATTTAATATATGTGTTCATCATATCACAATT 18836 || || | || || || || || | |||| ||| || ||||||| | ||||| Sbjct 7776 CAACTCCAGCAGGAGCCTGTCAGCCATGAATTGAATGTACTGCTTCATCAAAGTGCAATT 7717 Query 18837 CATTCCTATTAATTTAACAGGTAGTGCATCTGTAAGAAATTCTTGTTCTATATTTACTGC 18896 ||| || || | || || || | || || || || || || | |||||| | || || Sbjct 7716 CATGCCAATGAGCTTCACTGGCAAGGCCTCGGTGAGGAACTCCTCTTCTATCCTAACCGC 7657 Query 18897 CTCTGATA--TAATAGATACAACTCTATCTTCATTAGGAGGGTATAGAAGATGTTTAAAC 18954 | | ||| || | || | |||| | || ||| ||| | || ||||| ||| Sbjct 7656 AT-TAATAATTATTTCATTTA-CTCTCTGCTCTGAAGGTTTGTACAACAGGTGTTTGAAC 7599 Query 18955 ATCAAACATGCAAAATCACAATG-TAGTCCCTCGTCTCTACTTATCAATTCATTAGAAAA 19013 |||| || ||||| || || || ||| ||||| ||||| || || | || | || || Sbjct 7598 ATCAGGCAGGCAAAGTCCCAGTGATAG-CCCTCATCTCTGCTAATAAGCTCGCTGGAGAA 7540 Query 19014 TGTTAAACCAGGCATCAGTCCTCttttttttAACCAGAATATAGAAGCAAATGATCCAGA 19073 ||| | |||||||||||| |||| || | | ||||||||| || | || || ||||| Sbjct 7539 TGTGAGACCAGGCATCAGCCCTCGCTTCCTGAGCCAGAATATTGATGTGAAAGACCCAGA 7480 Query 19074 AAAGAATATACCTTCTACTGCTGCAAAAGCAACTAGTCTTTCTCCATAACTAGCATCATT 19133 |||||| | |||| || | ||||| || || | |||||| | | | || || Sbjct 7479 AAAGAAGGTTCCTTGCACCTCAGCAAAGGCCACCACATGCTCTCCACAGGTGGTCTCTTT 7420 Query 19134 ATTATGAATCCATTTCAGTGCCCAATCAGCCTTCTTTTTTACACATGGCATTGTCTCTAT 19193 | ||||| || ||||| | ||||||| || ||||| ||||| | | Sbjct 7419 GTCCCCGATCCAGCGCAAGGCCCAGTATACCTTCTTCTTGACACAAGGCATCAGTTTGAA 7360 Query 19194 AGAATTAAATAGATACATACGCTCATCTGT-ATCTTTAACATATGCATCTATCAATAAAC 19252 | ||| || || || | || | ||| |||||| | ||| | | | | | | Sbjct 7359 GGCATTGAAGAGGAACTCCCTTTCCT-TGTGATCTTTGATATAAGTGTTGAGGAGGAGGC 7301 Query 19253 TGTACATTTCTGAATGAATATTTTCTATAGCCATCTGAAATCCGTAAAAACATCTTGCTT 19312 ||||||| || ||||| |||||||| || || ||||| || ||||| || || | |||| Sbjct 7300 TGTACATCTCAGAATGTATATTTTCCATGGCAATCTGGAAGCCGTAGAAGCAGCAGGCTT 7241 Query 19313 CTGTTATCTGTACTTCACTACAAAATCTTTCGACCAAATTTTCATTAACTATTCCATCAC 19372 |||| ||||| |||| | | | || ||||| |||||||| || || |||| || Sbjct 7240 CTGTGATCTGAACTTGCTGGCTATACTGCTCCACCAAGTTTTCATTCACAATGCCATTAC 7181 Query 19373 TAGCTGCAAAAAATGCTAATACATGTTTAATAAAATGTTTTTCA 19416 | ||| |||| ||| | | || || ||| || || |||||| Sbjct 7180 TTGCTACAAAGAATCCCAGGACGTGAGAAATGAAGTGCTTTTCA 7137 >seq39192 Length=20454 Score = 147 bits (162), Expect = 2e-30 Identities = 514/793 (65%), Gaps = 27/793 (3%) Strand=Plus/Minus Query 18612 TTAAAAATCAACATCCAAAGAAAAAGAATTCTCTTCATTAGAATT--CATTACTCCCATT 18669 ||| || | | ||||||| | ||||| ||||||| | || | ||| |||||||| Sbjct 14653 TTAGAAGTTAGCATCCAAGGTGAAAGAGTTCTCTT--TGGGACTGGACATCACTCCCATC 14596 Query 18670 TTTTGATATTCGGCAACTCTTTT--TTCAAAGAAA------TTAGTTTTTCCCTCTAATG 18721 | ||||| || | |||||| | |||||| ||| || || || | || | || Sbjct 14595 CTCTGATACTCACCTACTCTTCTCTTTCAAACAAAAGGATGTTTGTCTTCCTTTCCAGTG 14536 Query 18722 ATATACATTCCATAAAATCAAATGGATTTTTTACATTATATAtttttttGAATCCTAATT 18781 | | |||||| || |||||||| |||| || | | || || | || | | Sbjct 14535 AAGTGTTTTCCATGAAGTCAAATGGGTTTTAGACTTGGAAAGCCTTGTTACAACCCAGCT 14476 Query 18782 CTAATAGTAGTCTATCCGCTACAAATTTAATATATGTGTTCATCATATCACAATTCATTC 18841 | | || || || | || ||||||| ||| || |||| || | ||||||||| | Sbjct 14475 CCAGCAGGAGCCTGTTGGCCACAAATTCAATGTACTGCTTCACCAAAGTACAATTCATCC 14416 Query 18842 CTATTAATTTAACAGGTAGTGCATCTGTAAGAAATTCTTGTTCTATATTTACTGCCTCTG 18901 | | | || || || | || ||||| || || | |||| ||| | || | | || Sbjct 14415 CATTGAGCTTCACTGGCAAGGCCTCTGTGAGGAACTTCTGTTTTATCCTAACCACAT-TG 14357 Query 18902 ATATAATAGATACA---ACTCTATCTTCATTAGGAGGGTATAGAAGATGTTTAAACATCA 18958 ||| || | || ||||| | || | | || ||| || ||||| ||||||| Sbjct 14356 ATA--ATGATTTCATTTACTCTCTGATCCAAATGTTTGTGTAGCAGGTGTTTGAACATCA 14299 Query 18959 AACATGCAAAATCACAATGTAGTCCCTCGTCTCTACTTATCAATTCATTAGAAAATGTTA 19018 || ||||| ||||| || | ||||| ||||| | || | ||||| || ||||| | Sbjct 14298 GGCAGGCAAAGTCACAGTGCAA-CCCTCATCTCTGTTAATAAGCTCATTGGAGAATGTGA 14240 Query 19019 AACCAGGCATCAGTCCTCttttttttAACCAGAATATAGAAGCAAATGATCCAGAAAAGA 19078 ||||||||||| |||| || || | || |||||| | | | || |||||||||| Sbjct 14239 GGCCAGGCATCAGCCCTCGCTTCTTGAGCCCGAATATCAATGTGGAAGACCCAGAAAAGA 14180 Query 19079 ATATACCTTCTACTGCTGCAAAAGCAACTAGTCTTTCTCCATAACTAGCATCATTATTAT 19138 | || ||||| | || ||||| | || | | |||||||| || || || | Sbjct 14179 AGATTCCTTCCATGGCAGCAAAGGTCACCACACGATCTCCATAGGGGGCCTCTTTGTCCC 14120 Query 19139 GAATCCATTTCAGTGCCCAATCAGCCTTCTTTTTTACACATGGCATTGTCTCTATAGAAT 19198 |||||| || || || || | |||| || ||||| ||||| | || || | Sbjct 14119 CAATCCAACGCAAGGCTCAGTCTG---TCTTCTTGACACAAGGCATCATTTCAATGACGT 14063 Query 19199 TAAATAGATACATACGCTCATCT---GTATCTTTAACATATGCATCTATCAATAAACTGT 19255 | | ||| || | ||| ||| | ||| || || | ||||| | || || | Sbjct 14062 TGA--AGAGGCACTCCCTCTTCTTGGGGTCCTTGAATGTAAGTGTCTATGAGGAAGCTAT 14005 Query 19256 ACATTTCTGAATGAATATTTTCTATAGCCATCTGAAATCCGTAAAAACATCTTGCTTCTG 19315 ||| || ||||| || ||||| || || | ||| || ||||| || || | |||| || Sbjct 14004 ACACCTCAGAATGTATGTTTTCCATGGCAACCTGGAAGCCGTAGAAGCAGCAGGCTTTTG 13945 Query 19316 TTATCTGTACTTCACTACAAAATCTTTCGACCAAATTTTCATTAACTATTCCATCACTAG 19375 | ||||| ||||| | ||| | || ||||| ||| |||| | || |||||||| Sbjct 13944 TGATCTGAACTTCCTGGCTAAACCGCTCCACCAAGTTTGCATTCATGATGCCATCACTCA 13885 Query 19376 CTGCAAAAAATGC 19388 ||||||| || || Sbjct 13884 CTGCAAAGAACGC 13872 >seq128274 Length=19531 Score = 102 bits (112), Expect = 9e-17 Identities = 103/134 (77%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 47328 TGAAATTCTCCAGATAGTACTCTACGGCTATATATATTACTTGTATATGGTTCTATAGAT 47387 ||||||||||| || | ||||| || |||| || || || ||||| ||||| || || Sbjct 12370 TGAAATTCTCCTGACAAGACTCTGCGAGTATAGATGTTGCTGGTATAAGGTTCAATGGAC 12311 Query 47388 TCATTATTTCCAAAAATTTGAGCAGTTGATGCTGTAGGCATGGATGCAACTAATAAGCTA 47447 ||||||||||| | ||| |||||||| || || |||||||| | |||| | ||| || Sbjct 12310 TCATTATTTCCCAGAATCTGAGCAGTGGAAGCAGTAGGCATTGGGGCAATAAGTAAACTG 12251 Query 47448 TTTCTTACTCCATA 47461 ||||||| ||||| Sbjct 12250 TTTCTTATACCATA 12237 Score = 102 bits (112), Expect = 9e-17 Identities = 124/169 (73%), Gaps = 0/169 (0%) Strand=Plus/Minus Query 47050 TCCATCCATAGAAATGCATACTAGTTAATTTAGAATAACTAGGTTCTGAAATATGAATAT 47109 |||| |||||||| ||||||||||| | ||| ||| |||| || | |||||| || | Sbjct 14648 TCCAGCCATAGAAGTGCATACTAGTGAGTTTGCCATAGTTAGGCTCAGCAATATGGATGT 14589 Query 47110 TAAGAGATTGACTCTGATCAATAAATGCACCTCTATCAGCTGCCATATCTAAAATAACCC 47169 | | ||| || || |||||||| || || ||||||||||||||||| | | || Sbjct 14588 TCAAAGACTGGCTTTGATCAATGAAAGCGCCTCTATCAGCTGCCATCTTGAGAACGGTTT 14529 Query 47170 TTTGTGGTATCTCCCATACTGTTTTATAAATTTGTTTAATGTCTTCTGG 47218 | || | || |||||||| || ||||||| ||| || | ||| || || Sbjct 14528 TCTGAGAGATTTCCCATACCGTCTTATAAAGTTGCTTCAGGTCATCAGG 14480 >seq176809 Length=13038 Score = 87.8 bits (96), Expect = 2e-12 Identities = 72/87 (83%), Gaps = 3/87 (3%) Strand=Plus/Plus Query 19334 AAAATCTTTCGACCAAATTTTCATTAACTATTCCATCACTAGCTGCAAAAAATGCTAATA 19393 |||||||| |||||||||||||| || ||||||||||| ||||||||||| ||||| | Sbjct 4232 AAAATCTT---ACCAAATTTTCATTTACAATTCCATCACTGGCTGCAAAAAAGGCTAAGA 4288 Query 19394 CATGTTTAATAAAATGTTTTTCATCTG 19420 ||| |||||||| || ||||||| Sbjct 4289 TATGAGAAATAAAATACTTCTCATCTG 4315 >seq32390 Length=18494 Score = 82.4 bits (90), Expect = 9e-11 Identities = 69/85 (81%), Gaps = 0/85 (0%) Strand=Plus/Minus Query 18673 TGATATTCGGCAACTCTTTTTTCAAAGAAATTAGTTTTTCCCTCTAATGATATACATTCC 18732 ||||| || | ||||| ||| ||||||||||| ||||| || ||||| || || |||| Sbjct 8431 TGATACTCTGAAACTCGTTTCTCAAAGAAATTTGTTTTCCCTTCTAAAGAAATGTTTTCC 8372 Query 18733 ATAAAATCAAATGGATTTTTTACAT 18757 ||||||||||| ||||||| | ||| Sbjct 8371 ATAAAATCAAAGGGATTTTCTGCAT 8347 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 560862316709640